RNA–Protein interactions for RNA: ENST00000376893.7

SSX3-202, Transcript of SSX family member 3, humanhuman

TSL 2 BASIC

Gene SSX3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-202ENST00000376893 FNBP4Q8N3X1 1017 aaPredicted RBP9.69□□□□□ -0.86
SSX3-202ENST00000376893 EVX2Q03828 476 aa9.68□□□□□ -0.86
SSX3-202ENST00000376893 CCDC97Q96F63 343 aaPredicted RBP9.68□□□□□ -0.86
SSX3-202ENST00000376893 FCHSD2O94868 740 aa9.67□□□□□ -0.86
SSX3-202ENST00000376893 POTEGQ6S5H5 508 aa9.67□□□□□ -0.86
SSX3-202ENST00000376893 ABCC8Q09428 1581 aa9.67□□□□□ -0.86
SSX3-202ENST00000376893 TTLL12Q14166 644 aaPredicted RBP9.66□□□□□ -0.86
SSX3-202ENST00000376893 EIF4G3O43432 1585 aaKnown RBP9.66□□□□□ -0.86
SSX3-202ENST00000376893 ZNF608Q9ULD9 1512 aaPredicted RBP9.66□□□□□ -0.86
SSX3-202ENST00000376893 POLA1P09884 1462 aaPredicted RBP9.66□□□□□ -0.86
SSX3-202ENST00000376893 NUTM2FA1L443 756 aa9.65□□□□□ -0.86
SSX3-202ENST00000376893 GOLGA2Q08379 1002 aa9.65□□□□□ -0.86
SSX3-202ENST00000376893 SYNJ1O43426 1573 aa9.65□□□□□ -0.86
SSX3-202ENST00000376893 FGD5Q6ZNL6 1462 aa9.65□□□□□ -0.87
SSX3-202ENST00000376893 ILDR1Q86SU0 546 aaPredicted RBP9.64□□□□□ -0.87
SSX3-202ENST00000376893 PIP4P2Q8N4L2 257 aa9.64□□□□□ -0.87
SSX3-202ENST00000376893 PCDH10Q9P2E7 1040 aa9.64□□□□□ -0.87
SSX3-202ENST00000376893 TARBP1Q13395 1621 aaKnown RBP9.64□□□□□ -0.87
SSX3-202ENST00000376893 RAD21O60216 631 aa9.63□□□□□ -0.87
SSX3-202ENST00000376893 FOXK1P85037 733 aa9.63□□□□□ -0.87
SSX3-202ENST00000376893 GIGYF2Q6Y7W6 1299 aaKnown RBP9.63□□□□□ -0.87
SSX3-202ENST00000376893 RGS22Q8NE09 1264 aa9.63□□□□□ -0.87
SSX3-202ENST00000376893 IFT140Q96RY7 1462 aa9.63□□□□□ -0.87
SSX3-202ENST00000376893 RAD54L2Q9Y4B4 1467 aa9.62□□□□□ -0.87
SSX3-202ENST00000376893 WDR97A6NE52 1622 aa9.62□□□□□ -0.87
SSX3-202ENST00000376893 MS4A1P11836 297 aa9.61□□□□□ -0.87
SSX3-202ENST00000376893 PTGER2P43116 358 aa9.61□□□□□ -0.87
SSX3-202ENST00000376893 PDE4CQ08493 712 aa9.61□□□□□ -0.87
SSX3-202ENST00000376893 DSG2Q14126 1118 aa9.61□□□□□ -0.87
SSX3-202ENST00000376893 OXER1Q8TDS5 423 aa9.61□□□□□ -0.87
SSX3-202ENST00000376893 ZNF777Q9ULD5 760 aaPredicted RBP9.61□□□□□ -0.87
SSX3-202ENST00000376893 BIVM-ERCC5R4GMW8 1640 aa9.6□□□□□ -0.87
SSX3-202ENST00000376893 OSBPP22059 807 aa9.6□□□□□ -0.87
SSX3-202ENST00000376893 SKIV2LQ15477 1246 aaKnown RBP9.6□□□□□ -0.87
SSX3-202ENST00000376893 TMCO4Q5TGY1 634 aa9.6□□□□□ -0.87
SSX3-202ENST00000376893 PATL2C9JE40 543 aaKnown RBP9.59□□□□□ -0.87
SSX3-202ENST00000376893 PPP1R15AO75807 674 aaPredicted RBP9.59□□□□□ -0.87
SSX3-202ENST00000376893 TMUB1Q9BVT8 246 aa9.59□□□□□ -0.87
SSX3-202ENST00000376893 TOP2BQ02880 1626 aa9.59□□□□□ -0.87
SSX3-202ENST00000376893 WRNQ14191 1432 aaPredicted RBP eCLIP9.58□□□□□ -0.88
SSX3-202ENST00000376893 SPDYE5A6NIY4 337 aa9.58□□□□□ -0.88
SSX3-202ENST00000376893 GRXCR2A6NFK2 248 aa9.57□□□□□ -0.88
SSX3-202ENST00000376893 AEBP1Q8IUX7 1158 aa9.57□□□□□ -0.88
SSX3-202ENST00000376893 RETREG2Q8NC44 543 aa9.56□□□□□ -0.88
SSX3-202ENST00000376893 AQRO60306 1485 aaKnown RBP eCLIP9.55□□□□□ -0.884e-6■■□□□ 13.4
SSX3-202ENST00000376893 CLCN1P35523 988 aa9.55□□□□□ -0.88
SSX3-202ENST00000376893 BANK1Q8NDB2 785 aa9.55□□□□□ -0.88
SSX3-202ENST00000376893 TMC2Q8TDI7 906 aa9.55□□□□□ -0.88
SSX3-202ENST00000376893 ZRANB1Q9UGI0 708 aa9.55□□□□□ -0.88
SSX3-202ENST00000376893 ABCA5Q8WWZ7 1642 aa9.55□□□□□ -0.88
SSX3-202ENST00000376893 FECHP22830 423 aa9.54□□□□□ -0.88
SSX3-202ENST00000376893 TMEM106CQ9BVX2 250 aa9.54□□□□□ -0.88
SSX3-202ENST00000376893 SOGA1O94964 1423 aa9.54□□□□□ -0.88
SSX3-202ENST00000376893 PBRM1Q86U86 1689 aa9.53□□□□□ -0.88
SSX3-202ENST00000376893 CD44P16070 742 aaKnown RBP9.53□□□□□ -0.88
SSX3-202ENST00000376893 PTGDRQ13258 359 aa9.53□□□□□ -0.88
SSX3-202ENST00000376893 POM121Q96HA1 1249 aa9.53□□□□□ -0.88
SSX3-202ENST00000376893 PHF12Q96QT6 1004 aa9.53□□□□□ -0.88
SSX3-202ENST00000376893 ABCA10Q8WWZ4 1543 aa9.52□□□□□ -0.88
SSX3-202ENST00000376893 MFAP1P55081 439 aaKnown RBP9.52□□□□□ -0.89
SSX3-202ENST00000376893 MAP3K9P80192 1104 aa9.52□□□□□ -0.89
SSX3-202ENST00000376893 REPIN1Q9BWE0 567 aaKnown RBP9.52□□□□□ -0.89
SSX3-202ENST00000376893 COG6Q9Y2V7 657 aa9.52□□□□□ -0.89
SSX3-202ENST00000376893 SNAPC4Q5SXM2 1469 aa9.52□□□□□ -0.89
SSX3-202ENST00000376893 TDRD9Q8NDG6 1382 aaKnown RBP9.51□□□□□ -0.89
SSX3-202ENST00000376893 GPCPD1Q9NPB8 672 aa9.51□□□□□ -0.89
SSX3-202ENST00000376893 CHD1O14646 1710 aa9.51□□□□□ -0.89
SSX3-202ENST00000376893 PLPP6Q8IY26 295 aa9.5□□□□□ -0.89
SSX3-202ENST00000376893 MTMR7Q9Y216 660 aa9.5□□□□□ -0.89
SSX3-202ENST00000376893 SOCS7O14512 581 aa9.49□□□□□ -0.89
SSX3-202ENST00000376893 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.49□□□□□ -0.89
SSX3-202ENST00000376893 GZF1Q9H116 711 aaPredicted RBP9.49□□□□□ -0.89
SSX3-202ENST00000376893 IRF5Q13568 498 aa9.48□□□□□ -0.89
SSX3-202ENST00000376893 ADAMTS12P58397 1594 aa9.48□□□□□ -0.89
SSX3-202ENST00000376893 MICALL2Q8IY33 904 aa9.47□□□□□ -0.89
SSX3-202ENST00000376893 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.47□□□□□ -0.89
SSX3-202ENST00000376893 ZNF330Q9Y3S2 320 aaPredicted RBP9.47□□□□□ -0.89
SSX3-202ENST00000376893 GAPVD1Q14C86 1478 aa9.47□□□□□ -0.89
SSX3-202ENST00000376893 KIF3CO14782 793 aa9.46□□□□□ -0.9
SSX3-202ENST00000376893 TRPC6Q9Y210 931 aa9.46□□□□□ -0.9
SSX3-202ENST00000376893 ACIN1Q9UKV3 1341 aaKnown RBP9.46□□□□□ -0.9
SSX3-202ENST00000376893 GRIN2BQ13224 1484 aa9.46□□□□□ -0.9
SSX3-202ENST00000376893 SSTR3P32745 418 aaPredicted RBP9.45□□□□□ -0.9
SSX3-202ENST00000376893 WWC1Q8IX03 1113 aa9.45□□□□□ -0.9
SSX3-202ENST00000376893 KCNA1Q09470 495 aa9.44□□□□□ -0.9
SSX3-202ENST00000376893 TMEM259Q4ZIN3 620 aa9.44□□□□□ -0.9
SSX3-202ENST00000376893 MS4A3Q96HJ5 214 aa9.44□□□□□ -0.9
SSX3-202ENST00000376893 MAGI1Q96QZ7 1491 aaPredicted RBP9.44□□□□□ -0.9
SSX3-202ENST00000376893 TIE1P35590 1138 aa9.43□□□□□ -0.9
SSX3-202ENST00000376893 DIXDC1Q155Q3 683 aa9.43□□□□□ -0.9
SSX3-202ENST00000376893 PROCA1Q8NCQ7 364 aaPredicted RBP9.43□□□□□ -0.9
SSX3-202ENST00000376893 BEGAINQ9BUH8 593 aa9.43□□□□□ -0.9
SSX3-202ENST00000376893 TBC1D12O60347 775 aa9.42□□□□□ -0.9
SSX3-202ENST00000376893 FBXW7Q969H0 707 aa9.42□□□□□ -0.9
SSX3-202ENST00000376893 SYNJ2O15056 1496 aa9.41□□□□□ -0.9
SSX3-202ENST00000376893 BRD1O95696 1058 aa9.41□□□□□ -0.9
SSX3-202ENST00000376893 PPP2R2DQ66LE6 453 aa9.41□□□□□ -0.9
SSX3-202ENST00000376893 TMEM121BQ9BXQ6 578 aaPredicted RBP9.41□□□□□ -0.9
SSX3-202ENST00000376893 USTQ9Y2C2 406 aa9.41□□□□□ -0.9
SSX3-202ENST00000376893 AMOTL2Q9Y2J4 779 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms