RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 CHMP5Q9NZZ3 219 aa10.94□□□□□ -0.66
SHROOM4-202ENST00000376020 CASKIN1Q8WXD9 1431 aa10.93□□□□□ -0.66
SHROOM4-202ENST00000376020 CALRP27797 417 aaKnown RBP10.93□□□□□ -0.66
SHROOM4-202ENST00000376020 HDGFP51858 240 aaKnown RBP10.93□□□□□ -0.66
SHROOM4-202ENST00000376020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.93□□□□□ -0.66
SHROOM4-202ENST00000376020 DCAF11Q8TEB1 546 aa10.93□□□□□ -0.66
SHROOM4-202ENST00000376020 CUL7Q14999 1698 aa10.93□□□□□ -0.66
SHROOM4-202ENST00000376020 TEX35Q5T0J7 233 aa10.93□□□□□ -0.66
SHROOM4-202ENST00000376020 CCDC66A2RUB6 948 aa10.93□□□□□ -0.66
SHROOM4-202ENST00000376020 CAVIN1Q6NZI2 390 aaKnown RBP10.92□□□□□ -0.66
SHROOM4-202ENST00000376020 SETQ01105 290 aaPredicted RBP10.92□□□□□ -0.66
SHROOM4-202ENST00000376020 EIF4G1Q04637 1599 aaKnown RBP10.92□□□□□ -0.66
SHROOM4-202ENST00000376020 FGD1P98174 961 aa10.92□□□□□ -0.66
SHROOM4-202ENST00000376020 DIAPH3Q9NSV4 1193 aa10.92□□□□□ -0.66
SHROOM4-202ENST00000376020 SMG6Q86US8 1419 aaKnown RBP10.92□□□□□ -0.66
SHROOM4-202ENST00000376020 HECW1Q76N89 1606 aa10.92□□□□□ -0.66
SHROOM4-202ENST00000376020 KCNJ4P48050 445 aa10.92□□□□□ -0.66
SHROOM4-202ENST00000376020 HFM1A2PYH4 1435 aa10.92□□□□□ -0.66
SHROOM4-202ENST00000376020 CT47B1P0C2W7 299 aaPredicted RBP10.92□□□□□ -0.66
SHROOM4-202ENST00000376020 NUP155O75694 1391 aa10.91□□□□□ -0.66
SHROOM4-202ENST00000376020 NOM1Q5C9Z4 860 aaKnown RBP10.91□□□□□ -0.66
SHROOM4-202ENST00000376020 MBD3O95983 291 aa10.91□□□□□ -0.66
SHROOM4-202ENST00000376020 MORC1Q86VD1 984 aa10.9□□□□□ -0.66
SHROOM4-202ENST00000376020 DDX19BQ9UMR2 479 aa10.9□□□□□ -0.67
SHROOM4-202ENST00000376020 CHGAP10645 457 aaKnown RBP10.9□□□□□ -0.67
SHROOM4-202ENST00000376020 MCM2P49736 904 aa10.89□□□□□ -0.67
SHROOM4-202ENST00000376020 CCDC7Q96M83 1385 aa10.89□□□□□ -0.67
SHROOM4-202ENST00000376020 LETM1O95202 739 aaPredicted RBP10.89□□□□□ -0.67
SHROOM4-202ENST00000376020 CIZ1Q9ULV3 898 aaPredicted RBP10.89□□□□□ -0.67
SHROOM4-202ENST00000376020 SLKQ9H2G2 1235 aaPredicted RBP10.89□□□□□ -0.67
SHROOM4-202ENST00000376020 KIF21AQ7Z4S6 1674 aa10.88□□□□□ -0.67
SHROOM4-202ENST00000376020 AKNAQ7Z591 1439 aa10.88□□□□□ -0.67
SHROOM4-202ENST00000376020 TERF2IPQ9NYB0 399 aa10.88□□□□□ -0.67
SHROOM4-202ENST00000376020 AQRO60306 1485 aaKnown RBP eCLIP10.88□□□□□ -0.67
SHROOM4-202ENST00000376020 THOC2Q8NI27 1593 aaKnown RBP10.88□□□□□ -0.67
SHROOM4-202ENST00000376020 CWC15Q9P013 229 aaKnown RBP10.88□□□□□ -0.67
SHROOM4-202ENST00000376020 L3MBTL2Q969R5 705 aa10.87□□□□□ -0.67
SHROOM4-202ENST00000376020 ARGLU1Q9NWB6 273 aaPredicted RBP10.87□□□□□ -0.67
SHROOM4-202ENST00000376020 PKD2Q13563 968 aa10.87□□□□□ -0.67
SHROOM4-202ENST00000376020 SPAG9O60271 1321 aaKnown RBP10.87□□□□□ -0.67
SHROOM4-202ENST00000376020 CCDC70Q6NSX1 233 aa10.86□□□□□ -0.67
SHROOM4-202ENST00000376020 KANK4Q5T7N3 995 aaPredicted RBP10.86□□□□□ -0.67
SHROOM4-202ENST00000376020 CCDC39Q9UFE4 941 aa10.86□□□□□ -0.67
SHROOM4-202ENST00000376020 ATAD2BQ9ULI0 1458 aa10.86□□□□□ -0.67
SHROOM4-202ENST00000376020 PLCB2Q00722 1185 aa10.85□□□□□ -0.67
SHROOM4-202ENST00000376020 FAM184AQ8NB25 1140 aa10.85□□□□□ -0.67
SHROOM4-202ENST00000376020 DHX29Q7Z478 1369 aaKnown RBP10.85□□□□□ -0.67
SHROOM4-202ENST00000376020 PDCL2Q8N4E4 241 aa10.85□□□□□ -0.67
SHROOM4-202ENST00000376020 KIF7Q2M1P5 1343 aa10.85□□□□□ -0.67
SHROOM4-202ENST00000376020 CCP110O43303 1012 aa10.85□□□□□ -0.67
SHROOM4-202ENST00000376020 TSPYL1Q9H0U9 437 aa10.85□□□□□ -0.67
SHROOM4-202ENST00000376020 HMGXB3Q12766 1538 aa10.85□□□□□ -0.67
SHROOM4-202ENST00000376020 ARID3CA6NKF2 412 aa10.85□□□□□ -0.67
SHROOM4-202ENST00000376020 CCDC173Q0VFZ6 552 aa10.85□□□□□ -0.67
SHROOM4-202ENST00000376020 LRRFIP1Q32MZ4 808 aaKnown RBP10.85□□□□□ -0.67
SHROOM4-202ENST00000376020 ACBD3Q9H3P7 528 aa10.85□□□□□ -0.67
SHROOM4-202ENST00000376020 DDX49Q9Y6V7 483 aaKnown RBP10.85□□□□□ -0.67
SHROOM4-202ENST00000376020 CC2D1BQ5T0F9 858 aaKnown RBP10.84□□□□□ -0.67
SHROOM4-202ENST00000376020 WWC1Q8IX03 1113 aa10.84□□□□□ -0.67
SHROOM4-202ENST00000376020 ZKSCAN2Q63HK3 967 aa10.84□□□□□ -0.67
SHROOM4-202ENST00000376020 POLA1P09884 1462 aaPredicted RBP10.84□□□□□ -0.67
SHROOM4-202ENST00000376020 PDE3AQ14432 1141 aa10.84□□□□□ -0.67
SHROOM4-202ENST00000376020 CC2D2AQ9P2K1 1620 aa10.84□□□□□ -0.67
SHROOM4-202ENST00000376020 HDGFL2Q7Z4V5 671 aaPredicted RBP10.83□□□□□ -0.68
SHROOM4-202ENST00000376020 ITPRIPQ8IWB1 547 aa10.83□□□□□ -0.68
SHROOM4-202ENST00000376020 ZNF428Q96B54 188 aa10.83□□□□□ -0.68
SHROOM4-202ENST00000376020 PRDM2Q13029 1718 aa10.83□□□□□ -0.68
SHROOM4-202ENST00000376020 OS9Q13438 667 aaPredicted RBP10.83□□□□□ -0.68
SHROOM4-202ENST00000376020 CADPSQ9ULU8 1353 aa10.83□□□□□ -0.68
SHROOM4-202ENST00000376020 NFKBIBQ15653 356 aa10.82□□□□□ -0.68
SHROOM4-202ENST00000376020 VSIG10Q8N0Z9 540 aa10.82□□□□□ -0.68
SHROOM4-202ENST00000376020 SMC4Q9NTJ3 1288 aa10.82□□□□□ -0.68
SHROOM4-202ENST00000376020 RGL3Q3MIN7 710 aa10.82□□□□□ -0.68
SHROOM4-202ENST00000376020 NASPP49321 788 aaPredicted RBP10.82□□□□□ -0.68
SHROOM4-202ENST00000376020 GOLGA6L19H0YKK7 550 aa10.81□□□□□ -0.68
SHROOM4-202ENST00000376020 MCM5P33992 734 aa10.81□□□□□ -0.68
SHROOM4-202ENST00000376020 POGKQ9P215 609 aa10.81□□□□□ -0.68
SHROOM4-202ENST00000376020 TPM1P09493 284 aa10.81□□□□□ -0.68
SHROOM4-202ENST00000376020 FGD5Q6ZNL6 1462 aa10.81□□□□□ -0.68
SHROOM4-202ENST00000376020 PDCP20941 246 aa10.8□□□□□ -0.68
SHROOM4-202ENST00000376020 HOOK1Q9UJC3 728 aaKnown RBP10.8□□□□□ -0.68
SHROOM4-202ENST00000376020 NAT10Q9H0A0 1025 aaKnown RBP10.8□□□□□ -0.68
SHROOM4-202ENST00000376020 GZF1Q9H116 711 aaPredicted RBP10.8□□□□□ -0.68
SHROOM4-202ENST00000376020 PRXQ9BXM0 1461 aa10.8□□□□□ -0.68
SHROOM4-202ENST00000376020 STK31Q9BXU1 1019 aa10.8□□□□□ -0.68
SHROOM4-202ENST00000376020 ITSN2Q9NZM3 1697 aa10.79□□□□□ -0.68
SHROOM4-202ENST00000376020 SYNJ1O43426 1573 aa10.79□□□□□ -0.68
SHROOM4-202ENST00000376020 RUFY2Q8WXA3 655 aa10.79□□□□□ -0.68
SHROOM4-202ENST00000376020 RTF1Q92541 710 aaKnown RBP10.79□□□□□ -0.68
SHROOM4-202ENST00000376020 GNL2Q13823 731 aaKnown RBP10.79□□□□□ -0.68
SHROOM4-202ENST00000376020 CWC22Q9HCG8 908 aaKnown RBP10.79□□□□□ -0.68
SHROOM4-202ENST00000376020 BIVM-ERCC5R4GMW8 1640 aa10.78□□□□□ -0.68
SHROOM4-202ENST00000376020 KIF2AO00139 706 aaPredicted RBP10.78□□□□□ -0.68
SHROOM4-202ENST00000376020 FHOD3Q2V2M9 1422 aa10.78□□□□□ -0.68
SHROOM4-202ENST00000376020 U2SURPO15042 1029 aaKnown RBP10.78□□□□□ -0.68
SHROOM4-202ENST00000376020 BACH2Q9BYV9 841 aa10.78□□□□□ -0.68
SHROOM4-202ENST00000376020 PEG3Q9GZU2 1588 aa10.78□□□□□ -0.68
SHROOM4-202ENST00000376020 MFAP1P55081 439 aaKnown RBP10.78□□□□□ -0.68
SHROOM4-202ENST00000376020 PKNOX2Q96KN3 472 aa10.77□□□□□ -0.69
SHROOM4-202ENST00000376020 RABEP1Q15276 862 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms