RNA–Protein interactions for RNA: ENST00000373344.9

ATRX-201, Transcript of ATRX, chromatin remodeler, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATRX, Length 11,220 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-201ENST00000373344 GOLGA6L22H0YM25 854 aa6.66□□□□□ -1.34
ATRX-201ENST00000373344 ZNF644Q9H582 1327 aaPredicted RBP6.66□□□□□ -1.34
ATRX-201ENST00000373344 SF3B2Q13435 895 aaKnown RBP6.66□□□□□ -1.34
ATRX-201ENST00000373344 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.66□□□□□ -1.34
ATRX-201ENST00000373344 EVC2Q86UK5 1308 aa6.66□□□□□ -1.34
ATRX-201ENST00000373344 RAPGEF3O95398 923 aa6.65□□□□□ -1.34
ATRX-201ENST00000373344 ST20-MTHFSA0A0A6YYL1 179 aa6.65□□□□□ -1.34
ATRX-201ENST00000373344 IPO8O15397 1037 aaKnown RBP6.65□□□□□ -1.34
ATRX-201ENST00000373344 ITPRIPQ8IWB1 547 aa6.65□□□□□ -1.34
ATRX-201ENST00000373344 TTC5Q8N0Z6 440 aa6.65□□□□□ -1.34
ATRX-201ENST00000373344 SMC4Q9NTJ3 1288 aa6.65□□□□□ -1.34
ATRX-201ENST00000373344 PMFBP1Q8TBY8 1022 aa6.65□□□□□ -1.35
ATRX-201ENST00000373344 NECTIN2Q92692 538 aa6.65□□□□□ -1.35
ATRX-201ENST00000373344 EIF2S2P20042 333 aaKnown RBP6.65□□□□□ -1.35
ATRX-201ENST00000373344 TIMELESSQ9UNS1 1208 aa6.65□□□□□ -1.35
ATRX-201ENST00000373344 PROSER2Q86WR7 435 aaPredicted RBP6.64□□□□□ -1.35
ATRX-201ENST00000373344 CHMP4AQ9BY43 222 aa6.64□□□□□ -1.35
ATRX-201ENST00000373344 UACAQ9BZF9 1416 aa6.64□□□□□ -1.35
ATRX-201ENST00000373344 HSP90AB1P08238 724 aaKnown RBP6.64□□□□□ -1.35
ATRX-201ENST00000373344 GNL2Q13823 731 aaKnown RBP6.64□□□□□ -1.35
ATRX-201ENST00000373344 PRG4Q92954 1404 aaPredicted RBP6.64□□□□□ -1.35
ATRX-201ENST00000373344 EIF5BO60841 1220 aaKnown RBP6.64□□□□□ -1.35
ATRX-201ENST00000373344 TMEM132EQ6IEE7 984 aa6.64□□□□□ -1.35
ATRX-201ENST00000373344 STRN4Q9NRL3 753 aa6.64□□□□□ -1.35
ATRX-201ENST00000373344 ARHGAP5Q13017 1502 aa6.64□□□□□ -1.35
ATRX-201ENST00000373344 CLUAP1Q96AJ1 413 aa6.64□□□□□ -1.35
ATRX-201ENST00000373344 RRP7AQ9Y3A4 280 aaKnown RBP6.64□□□□□ -1.35
ATRX-201ENST00000373344 TRIM6-TRIM34B2RNG4 842 aa6.63□□□□□ -1.35
ATRX-201ENST00000373344 KIAA1211Q6ZU35 1233 aa6.63□□□□□ -1.35
ATRX-201ENST00000373344 ABTB2Q8N961 1025 aa6.63□□□□□ -1.35
ATRX-201ENST00000373344 MCCP23508 829 aa6.63□□□□□ -1.35
ATRX-201ENST00000373344 RAPGEF4Q8WZA2 1011 aa6.62□□□□□ -1.35
ATRX-201ENST00000373344 GRIN2BQ13224 1484 aa6.62□□□□□ -1.35
ATRX-201ENST00000373344 RAD21O60216 631 aa6.62□□□□□ -1.35
ATRX-201ENST00000373344 PANK3Q9H999 370 aa6.62□□□□□ -1.35
ATRX-201ENST00000373344 IGF1RP08069 1367 aa6.62□□□□□ -1.35
ATRX-201ENST00000373344 THEMISQ8N1K5 641 aaPredicted RBP6.62□□□□□ -1.35
ATRX-201ENST00000373344 FBXW7Q969H0 707 aa6.62□□□□□ -1.35
ATRX-201ENST00000373344 SPRYD3Q8NCJ5 442 aa6.62□□□□□ -1.35
ATRX-201ENST00000373344 DDRGK1Q96HY6 314 aa6.62□□□□□ -1.35
ATRX-201ENST00000373344 TRIM44Q96DX7 344 aaPredicted RBP6.62□□□□□ -1.35
ATRX-201ENST00000373344 SLC26A8Q96RN1 970 aa6.61□□□□□ -1.35
ATRX-201ENST00000373344 NLRP6P59044 892 aa6.61□□□□□ -1.35
ATRX-201ENST00000373344 NCAPD3P42695 1498 aa6.61□□□□□ -1.35
ATRX-201ENST00000373344 MRC2Q9UBG0 1479 aa6.61□□□□□ -1.35
ATRX-201ENST00000373344 RALBP1Q15311 655 aa6.61□□□□□ -1.35
ATRX-201ENST00000373344 TOMM22Q9NS69 142 aa6.61□□□□□ -1.35
ATRX-201ENST00000373344 LMOD3Q0VAK6 560 aa6.61□□□□□ -1.35
ATRX-201ENST00000373344 GOLGA6L4A6NEF3 574 aa6.61□□□□□ -1.35
ATRX-201ENST00000373344 NLRP2Q9NX02 1062 aa6.6□□□□□ -1.35
ATRX-201ENST00000373344 CGNL1Q0VF96 1302 aa6.6□□□□□ -1.35
ATRX-201ENST00000373344 BCL2L13Q9BXK5 485 aa6.6□□□□□ -1.35
ATRX-201ENST00000373344 VPS37DQ86XT2 251 aa6.6□□□□□ -1.35
ATRX-201ENST00000373344 SYNJ2O15056 1496 aa6.6□□□□□ -1.35
ATRX-201ENST00000373344 HDAC5Q9UQL6 1122 aa6.59□□□□□ -1.35
ATRX-201ENST00000373344 DHX57Q6P158 1386 aaKnown RBP6.59□□□□□ -1.35
ATRX-201ENST00000373344 FAM177BA6PVY3 158 aa6.59□□□□□ -1.35
ATRX-201ENST00000373344 NEXNQ0ZGT2 675 aa6.59□□□□□ -1.35
ATRX-201ENST00000373344 ANKLE2Q86XL3 938 aa6.59□□□□□ -1.35
ATRX-201ENST00000373344 HMOX1P09601 288 aa6.59□□□□□ -1.35
ATRX-201ENST00000373344 DDX54Q8TDD1 881 aaKnown RBP6.59□□□□□ -1.35
ATRX-201ENST00000373344 GPATCH3Q96I76 525 aa6.59□□□□□ -1.35
ATRX-201ENST00000373344 VPS53Q5VIR6 699 aa6.58□□□□□ -1.36
ATRX-201ENST00000373344 CABP2Q9NPB3 220 aa6.58□□□□□ -1.36
ATRX-201ENST00000373344 SNAPC4Q5SXM2 1469 aa6.58□□□□□ -1.36
ATRX-201ENST00000373344 KIF15Q9NS87 1388 aa6.58□□□□□ -1.36
ATRX-201ENST00000373344 AIMP1Q12904 312 aaKnown RBP6.58□□□□□ -1.36
ATRX-201ENST00000373344 C9orf78Q9NZ63 289 aaPredicted RBP6.58□□□□□ -1.36
ATRX-201ENST00000373344 SCAPERQ9BY12 1400 aa6.58□□□□□ -1.36
ATRX-201ENST00000373344 DNTTIP2Q5QJE6 756 aaKnown RBP6.58□□□□□ -1.36
ATRX-201ENST00000373344 TRIM34Q9BYJ4 488 aa6.58□□□□□ -1.36
ATRX-201ENST00000373344 PTMAP06454 111 aaKnown RBP6.57□□□□□ -1.36
ATRX-201ENST00000373344 RBM33Q96EV2 1170 aaKnown RBP6.57□□□□□ -1.36
ATRX-201ENST00000373344 TCERG1O14776 1098 aaKnown RBP6.57□□□□□ -1.36
ATRX-201ENST00000373344 GGNBP2Q9H3C7 697 aa6.57□□□□□ -1.36
ATRX-201ENST00000373344 RCAN3Q9UKA8 241 aa6.57□□□□□ -1.36
ATRX-201ENST00000373344 GPRASP1Q5JY77 1395 aa6.57□□□□□ -1.36
ATRX-201ENST00000373344 DIAPH1O60610 1272 aaKnown RBP6.57□□□□□ -1.36
ATRX-201ENST00000373344 SAMD1Q6SPF0 538 aaPredicted RBP6.57□□□□□ -1.36
ATRX-201ENST00000373344 TOM1L2Q6ZVM7 507 aa6.57□□□□□ -1.36
ATRX-201ENST00000373344 HSP90B1P14625 803 aaKnown RBP6.57□□□□□ -1.36
ATRX-201ENST00000373344 XPCQ01831 940 aaPredicted RBP6.56□□□□□ -1.36
ATRX-201ENST00000373344 RBM42Q9BTD8 480 aaKnown RBP6.56□□□□□ -1.36
ATRX-201ENST00000373344 IFT140Q96RY7 1462 aa6.56□□□□□ -1.36
ATRX-201ENST00000373344 MYOM3Q5VTT5 1437 aa6.56□□□□□ -1.36
ATRX-201ENST00000373344 HMMRO75330 724 aa6.56□□□□□ -1.36
ATRX-201ENST00000373344 PDE3BQ13370 1112 aa6.56□□□□□ -1.36
ATRX-201ENST00000373344 RILPL2Q969X0 211 aa6.56□□□□□ -1.36
ATRX-201ENST00000373344 PPP4R2Q9NY27 417 aa6.56□□□□□ -1.36
ATRX-201ENST00000373344 CFAP44Q96MT7 982 aa6.55□□□□□ -1.36
ATRX-201ENST00000373344 PRAM1Q96QH2 718 aa6.55□□□□□ -1.36
ATRX-201ENST00000373344 PLIN1O60240 522 aa6.55□□□□□ -1.36
ATRX-201ENST00000373344 NLRP13Q86W25 1043 aa6.55□□□□□ -1.36
ATRX-201ENST00000373344 HSCBQ8IWL3 235 aa6.55□□□□□ -1.36
ATRX-201ENST00000373344 NOL10Q9BSC4 688 aaKnown RBP6.55□□□□□ -1.36
ATRX-201ENST00000373344 CFAP70Q5T0N1 1121 aa6.55□□□□□ -1.36
ATRX-201ENST00000373344 CWC22Q9HCG8 908 aaKnown RBP6.55□□□□□ -1.36
ATRX-201ENST00000373344 RIPK4P57078 832 aa6.55□□□□□ -1.36
ATRX-201ENST00000373344 RWDD1Q9H446 243 aaPredicted RBP6.55□□□□□ -1.36
ATRX-201ENST00000373344 RIC3Q7Z5B4 369 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms