RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 MAST1Q9Y2H9 1570 aa17.32■□□□□ 0.36
CTPS1-202ENST00000372621 UNC13BO14795 1591 aa17.32■□□□□ 0.36
CTPS1-202ENST00000372621 ST20-MTHFSA0A0A6YYL1 179 aa17.32■□□□□ 0.36
CTPS1-202ENST00000372621 LRPPRCP42704 1394 aaKnown RBP17.31■□□□□ 0.36
CTPS1-202ENST00000372621 KTN1Q86UP2 1357 aaKnown RBP17.31■□□□□ 0.36
CTPS1-202ENST00000372621 RSPH4AQ5TD94 716 aa17.3■□□□□ 0.36
CTPS1-202ENST00000372621 DCAF11Q8TEB1 546 aa17.3■□□□□ 0.36
CTPS1-202ENST00000372621 PRAG1Q86YV5 1406 aa17.29■□□□□ 0.36
CTPS1-202ENST00000372621 KDM2AQ9Y2K7 1162 aa17.29■□□□□ 0.36
CTPS1-202ENST00000372621 BRD4O60885 1362 aaPredicted RBP17.28■□□□□ 0.36
CTPS1-202ENST00000372621 TTC37Q6PGP7 1564 aa17.28■□□□□ 0.36
CTPS1-202ENST00000372621 SYCP2Q9BX26 1530 aa17.27■□□□□ 0.36
CTPS1-202ENST00000372621 CNGB1Q14028 1251 aaPredicted RBP17.27■□□□□ 0.36
CTPS1-202ENST00000372621 PLA2R1Q13018 1463 aa17.27■□□□□ 0.35
CTPS1-202ENST00000372621 LAMC1P11047 1609 aa17.27■□□□□ 0.35
CTPS1-202ENST00000372621 TMC1Q8TDI8 760 aa17.26■□□□□ 0.35
CTPS1-202ENST00000372621 MYBBP1AQ9BQG0 1328 aaKnown RBP17.26■□□□□ 0.35
CTPS1-202ENST00000372621 SHROOM2Q13796 1616 aa17.26■□□□□ 0.35
CTPS1-202ENST00000372621 PLXNC1O60486 1568 aa17.26■□□□□ 0.35
CTPS1-202ENST00000372621 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.25■□□□□ 0.35
CTPS1-202ENST00000372621 RALBP1Q15311 655 aa17.25■□□□□ 0.35
CTPS1-202ENST00000372621 IQGAP3Q86VI3 1631 aa17.25■□□□□ 0.35
CTPS1-202ENST00000372621 CCDC144AA2RUR9 1427 aa17.25■□□□□ 0.35
CTPS1-202ENST00000372621 GPRASP1Q5JY77 1395 aa17.24■□□□□ 0.35
CTPS1-202ENST00000372621 CHD1O14646 1710 aa17.24■□□□□ 0.35
CTPS1-202ENST00000372621 MYO5CQ9NQX4 1742 aa17.23■□□□□ 0.35
CTPS1-202ENST00000372621 A2MP01023 1474 aa17.22■□□□□ 0.35
CTPS1-202ENST00000372621 ARHGAP5Q13017 1502 aa17.22■□□□□ 0.35
CTPS1-202ENST00000372621 PRDM15P57071 1507 aaPredicted RBP17.22■□□□□ 0.35
CTPS1-202ENST00000372621 PARD3Q8TEW0 1356 aa17.22■□□□□ 0.35
CTPS1-202ENST00000372621 MAGI2Q86UL8 1455 aa17.2■□□□□ 0.34
CTPS1-202ENST00000372621 ATP10AO60312 1499 aa17.2■□□□□ 0.34
CTPS1-202ENST00000372621 COL17A1Q9UMD9 1497 aaPredicted RBP17.19■□□□□ 0.34
CTPS1-202ENST00000372621 PER1O15534 1290 aaPredicted RBP17.18■□□□□ 0.34
CTPS1-202ENST00000372621 PLEKHH2Q8IVE3 1493 aa17.18■□□□□ 0.34
CTPS1-202ENST00000372621 EIF2AK4Q9P2K8 1649 aaKnown RBP17.18■□□□□ 0.34
CTPS1-202ENST00000372621 ABCC2Q92887 1545 aa17.17■□□□□ 0.34
CTPS1-202ENST00000372621 NBPF1Q3BBV0 1214 aa17.17■□□□□ 0.34
CTPS1-202ENST00000372621 DUOX2Q9NRD8 1548 aa17.17■□□□□ 0.34
CTPS1-202ENST00000372621 NLRP13Q86W25 1043 aa17.15■□□□□ 0.34
CTPS1-202ENST00000372621 TESK2Q96S53 571 aa17.15■□□□□ 0.34
CTPS1-202ENST00000372621 SENP3-EIF4A1A0A087X0R7 540 aa17.15■□□□□ 0.34
CTPS1-202ENST00000372621 ERBINQ96RT1 1412 aa17.14■□□□□ 0.33
CTPS1-202ENST00000372621 RNF17Q9BXT8 1623 aaKnown RBP17.14■□□□□ 0.33
CTPS1-202ENST00000372621 ERCC6L2Q5T890 1561 aa17.14■□□□□ 0.33
CTPS1-202ENST00000372621 CCDC136Q96JN2 1154 aa17.13■□□□□ 0.33
CTPS1-202ENST00000372621 WASHC2CQ9Y4E1 1318 aa17.13■□□□□ 0.33
CTPS1-202ENST00000372621 RGL3Q3MIN7 710 aa17.13■□□□□ 0.33
CTPS1-202ENST00000372621 DISP3Q9P2K9 1392 aa17.13■□□□□ 0.33
CTPS1-202ENST00000372621 ZMYM4Q5VZL5 1548 aa17.12■□□□□ 0.33
CTPS1-202ENST00000372621 INSRP06213 1382 aa17.11■□□□□ 0.33
CTPS1-202ENST00000372621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.1■□□□□ 0.333e-6■■□□□ 13.3
CTPS1-202ENST00000372621 PLCH2O75038 1416 aa17.09■□□□□ 0.33
CTPS1-202ENST00000372621 RRP1P56182 461 aaKnown RBP17.09■□□□□ 0.33
CTPS1-202ENST00000372621 PDE3BQ13370 1112 aa17.08■□□□□ 0.33
CTPS1-202ENST00000372621 ERICH6Q7L0X2 663 aa17.08■□□□□ 0.33
CTPS1-202ENST00000372621 ABCC1P33527 1531 aa17.08■□□□□ 0.32
CTPS1-202ENST00000372621 BLMP54132 1417 aaPredicted RBP17.07■□□□□ 0.32
CTPS1-202ENST00000372621 ZCCHC11Q5TAX3 1644 aaKnown RBP17.07■□□□□ 0.32
CTPS1-202ENST00000372621 MADDQ8WXG6 1647 aa17.05■□□□□ 0.32
CTPS1-202ENST00000372621 RCAN3Q9UKA8 241 aa17.05■□□□□ 0.32
CTPS1-202ENST00000372621 IQGAP1P46940 1657 aa17.05■□□□□ 0.32
CTPS1-202ENST00000372621 PANK3Q9H999 370 aa17.04■□□□□ 0.32
CTPS1-202ENST00000372621 UHRF1BP1LA0JNW5 1464 aa17.04■□□□□ 0.32
CTPS1-202ENST00000372621 TMF1P82094 1093 aa17.03■□□□□ 0.32
CTPS1-202ENST00000372621 TRAPPC8Q9Y2L5 1435 aa17.03■□□□□ 0.32
CTPS1-202ENST00000372621 CEP152O94986 1710 aa17.02■□□□□ 0.32
CTPS1-202ENST00000372621 SPHKAPQ2M3C7 1700 aa17.02■□□□□ 0.32
CTPS1-202ENST00000372621 CC2D1BQ5T0F9 858 aaKnown RBP17.02■□□□□ 0.31
CTPS1-202ENST00000372621 TRPM2O94759 1503 aa17.01■□□□□ 0.31
CTPS1-202ENST00000372621 WDR7Q9Y4E6 1490 aa17.01■□□□□ 0.31
CTPS1-202ENST00000372621 EFCAB2Q5VUJ9 269 aa17.01■□□□□ 0.31
CTPS1-202ENST00000372621 EXOC6Q8TAG9 804 aa17.01■□□□□ 0.31
CTPS1-202ENST00000372621 DEPDC5O75140 1603 aa17.01■□□□□ 0.31
CTPS1-202ENST00000372621 NOP58Q9Y2X3 529 aaKnown RBP17■□□□□ 0.31
CTPS1-202ENST00000372621 CLASP1Q7Z460 1538 aa16.99■□□□□ 0.31
CTPS1-202ENST00000372621 CDCA7LQ96GN5 454 aa16.99■□□□□ 0.31
CTPS1-202ENST00000372621 RTEL1-TNFRSF6BF6WH68 1400 aa16.99■□□□□ 0.31
CTPS1-202ENST00000372621 ARAP3Q8WWN8 1544 aa16.99■□□□□ 0.31
CTPS1-202ENST00000372621 SALL2Q9Y467 1007 aaPredicted RBP16.99■□□□□ 0.31
CTPS1-202ENST00000372621 ZFYVE16Q7Z3T8 1539 aa16.98■□□□□ 0.31
CTPS1-202ENST00000372621 PTPRTO14522 1441 aa16.98■□□□□ 0.31
CTPS1-202ENST00000372621 CLTCL1P53675 1640 aa16.96■□□□□ 0.31
CTPS1-202ENST00000372621 SCAPERQ9BY12 1400 aa16.96■□□□□ 0.31
CTPS1-202ENST00000372621 PAK3O75914 559 aaPredicted RBP16.96■□□□□ 0.31
CTPS1-202ENST00000372621 SYNMO15061 1565 aa16.96■□□□□ 0.31
CTPS1-202ENST00000372621 TET3O43151 1660 aa16.95■□□□□ 0.3
CTPS1-202ENST00000372621 IPO9Q96P70 1041 aaKnown RBP16.95■□□□□ 0.3
CTPS1-202ENST00000372621 MYT1LQ9UL68 1186 aa16.94■□□□□ 0.3
CTPS1-202ENST00000372621 BCL11AQ9H165 835 aa16.94■□□□□ 0.3
CTPS1-202ENST00000372621 MYOM1P52179 1685 aa16.94■□□□□ 0.3
CTPS1-202ENST00000372621 VWDEQ8N2E2 1590 aa16.94■□□□□ 0.3
CTPS1-202ENST00000372621 SCAF11Q99590 1463 aaKnown RBP16.94■□□□□ 0.3
CTPS1-202ENST00000372621 STAC3Q96MF2 364 aa16.93■□□□□ 0.3
CTPS1-202ENST00000372621 KIAA1210Q9ULL0 1709 aa16.93■□□□□ 0.3
CTPS1-202ENST00000372621 NEURL4Q96JN8 1562 aa16.93■□□□□ 0.3
CTPS1-202ENST00000372621 ANP32AP39687 249 aaKnown RBP16.92■□□□□ 0.3
CTPS1-202ENST00000372621 SPAG9O60271 1321 aaKnown RBP16.92■□□□□ 0.3
CTPS1-202ENST00000372621 TCERG1O14776 1098 aaKnown RBP16.92■□□□□ 0.3
CTPS1-202ENST00000372621 AMER1Q5JTC6 1135 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms