RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 CHMP4BQ9H444 224 aaKnown RBP17.62■□□□□ 0.41
RAPGEF1-202ENST00000372190 RGS3P49796 1198 aa17.62■□□□□ 0.41
RAPGEF1-202ENST00000372190 TRAK1Q9UPV9 953 aa17.62■□□□□ 0.41
RAPGEF1-202ENST00000372190 CCDC144AA2RUR9 1427 aa17.62■□□□□ 0.41
RAPGEF1-202ENST00000372190 DNAJC5BQ9UF47 199 aa17.61■□□□□ 0.41
RAPGEF1-202ENST00000372190 RRP12Q5JTH9 1297 aaKnown RBP17.61■□□□□ 0.41
RAPGEF1-202ENST00000372190 TEX35Q5T0J7 233 aa17.61■□□□□ 0.41
RAPGEF1-202ENST00000372190 HTATSF1O43719 755 aaKnown RBP17.6■□□□□ 0.41
RAPGEF1-202ENST00000372190 AMPHP49418 695 aa17.6■□□□□ 0.41
RAPGEF1-202ENST00000372190 KTN1Q86UP2 1357 aaKnown RBP17.6■□□□□ 0.41
RAPGEF1-202ENST00000372190 PATL2C9JE40 543 aaKnown RBP17.6■□□□□ 0.41
RAPGEF1-202ENST00000372190 SNAPC4Q5SXM2 1469 aa17.59■□□□□ 0.41
RAPGEF1-202ENST00000372190 SYAP1Q96A49 352 aaPredicted RBP17.59■□□□□ 0.41
RAPGEF1-202ENST00000372190 TMX4Q9H1E5 349 aaPredicted RBP17.59■□□□□ 0.41
RAPGEF1-202ENST00000372190 MS4A1P11836 297 aa17.59■□□□□ 0.41
RAPGEF1-202ENST00000372190 EVA1CP58658 441 aa17.58■□□□□ 0.4
RAPGEF1-202ENST00000372190 TAF7LQ5H9L4 462 aa17.58■□□□□ 0.4
RAPGEF1-202ENST00000372190 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.58■□□□□ 0.4
RAPGEF1-202ENST00000372190 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.58■□□□□ 0.4
RAPGEF1-202ENST00000372190 SYNJ2O15056 1496 aa17.58■□□□□ 0.4
RAPGEF1-202ENST00000372190 TOPBP1Q92547 1522 aa17.57■□□□□ 0.4
RAPGEF1-202ENST00000372190 LTV1Q96GA3 475 aaPredicted RBP17.56■□□□□ 0.4
RAPGEF1-202ENST00000372190 ARHGAP5Q13017 1502 aa17.56■□□□□ 0.4
RAPGEF1-202ENST00000372190 CCER2I3L3R5 266 aa17.56■□□□□ 0.4
RAPGEF1-202ENST00000372190 U2AF1L5P0DN76 240 aaPredicted RBP17.56■□□□□ 0.4
RAPGEF1-202ENST00000372190 U2AF1Q01081 240 aaKnown RBP eCLIP17.56■□□□□ 0.4
RAPGEF1-202ENST00000372190 TPM4P67936 248 aa17.55■□□□□ 0.4
RAPGEF1-202ENST00000372190 GZF1Q9H116 711 aaPredicted RBP17.54■□□□□ 0.4
RAPGEF1-202ENST00000372190 CALD1Q05682 793 aaKnown RBP17.53■□□□□ 0.4
RAPGEF1-202ENST00000372190 FGD1P98174 961 aa17.53■□□□□ 0.4
RAPGEF1-202ENST00000372190 ATF3P18847 181 aa17.52■□□□□ 0.39
RAPGEF1-202ENST00000372190 MYOM3Q5VTT5 1437 aa17.51■□□□□ 0.39
RAPGEF1-202ENST00000372190 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
RAPGEF1-202ENST00000372190 L3MBTL2Q969R5 705 aa17.5■□□□□ 0.39
RAPGEF1-202ENST00000372190 NEFHP12036 1026 aa17.5■□□□□ 0.39
RAPGEF1-202ENST00000372190 CCDC66A2RUB6 948 aa17.49■□□□□ 0.39
RAPGEF1-202ENST00000372190 LAMC3Q9Y6N6 1575 aa17.48■□□□□ 0.39
RAPGEF1-202ENST00000372190 POLA1P09884 1462 aaPredicted RBP17.48■□□□□ 0.39
RAPGEF1-202ENST00000372190 CUX1P39880 1505 aa17.48■□□□□ 0.39
RAPGEF1-202ENST00000372190 PSME1Q06323 249 aa17.48■□□□□ 0.39
RAPGEF1-202ENST00000372190 DNMBPQ6XZF7 1577 aa17.48■□□□□ 0.39
RAPGEF1-202ENST00000372190 CFAP44Q96MT7 982 aa17.48■□□□□ 0.39
RAPGEF1-202ENST00000372190 MINK1Q8N4C8 1332 aaPredicted RBP17.47■□□□□ 0.39
RAPGEF1-202ENST00000372190 RDXP35241 583 aaKnown RBP17.47■□□□□ 0.39
RAPGEF1-202ENST00000372190 EVC2Q86UK5 1308 aa17.47■□□□□ 0.39
RAPGEF1-202ENST00000372190 CHMP4AQ9BY43 222 aa17.46■□□□□ 0.39
RAPGEF1-202ENST00000372190 MCCP23508 829 aa17.46■□□□□ 0.39
RAPGEF1-202ENST00000372190 SPRYD3Q8NCJ5 442 aa17.46■□□□□ 0.39
RAPGEF1-202ENST00000372190 KIF15Q9NS87 1388 aa17.45■□□□□ 0.38
RAPGEF1-202ENST00000372190 MAP7D2Q96T17 732 aa17.45■□□□□ 0.38
RAPGEF1-202ENST00000372190 TPM3P06753 285 aa17.45■□□□□ 0.38
RAPGEF1-202ENST00000372190 COG3Q96JB2 828 aa17.45■□□□□ 0.38
RAPGEF1-202ENST00000372190 MTERF4Q7Z6M4 381 aaKnown RBP17.44■□□□□ 0.38
RAPGEF1-202ENST00000372190 FAM13BQ9NYF5 915 aa17.44■□□□□ 0.38
RAPGEF1-202ENST00000372190 CWC15Q9P013 229 aaKnown RBP17.44■□□□□ 0.38
RAPGEF1-202ENST00000372190 CLSTN1O94985 981 aa17.44■□□□□ 0.38
RAPGEF1-202ENST00000372190 HMMRO75330 724 aa17.44■□□□□ 0.38
RAPGEF1-202ENST00000372190 RALBP1Q15311 655 aa17.44■□□□□ 0.38
RAPGEF1-202ENST00000372190 ZNF644Q9H582 1327 aaPredicted RBP17.44■□□□□ 0.38
RAPGEF1-202ENST00000372190 AFAP1Q8N556 730 aa17.43■□□□□ 0.38
RAPGEF1-202ENST00000372190 CCDC191Q8NCU4 936 aa17.43■□□□□ 0.38
RAPGEF1-202ENST00000372190 KCNJ4P48050 445 aa17.43■□□□□ 0.38
RAPGEF1-202ENST00000372190 PRM3Q9NNZ6 103 aa17.42■□□□□ 0.38
RAPGEF1-202ENST00000372190 TAOK2Q9UL54 1235 aa17.42■□□□□ 0.38
RAPGEF1-202ENST00000372190 PHF23Q9BUL5 403 aaPredicted RBP17.42■□□□□ 0.38
RAPGEF1-202ENST00000372190 STK31Q9BXU1 1019 aa17.41■□□□□ 0.38
RAPGEF1-202ENST00000372190 MSH5O43196 834 aa17.41■□□□□ 0.38
RAPGEF1-202ENST00000372190 NAP1L2Q9ULW6 460 aaPredicted RBP17.41■□□□□ 0.38
RAPGEF1-202ENST00000372190 G3V3G9 751 aa17.41■□□□□ 0.38
RAPGEF1-202ENST00000372190 DCAF8Q5TAQ9 597 aa17.41■□□□□ 0.38
RAPGEF1-202ENST00000372190 BICRAQ9NZM4 1560 aa17.4■□□□□ 0.38
RAPGEF1-202ENST00000372190 C1orf141Q5JVX7 400 aa17.39■□□□□ 0.37
RAPGEF1-202ENST00000372190 TSHZ2Q9NRE2 1034 aa17.39■□□□□ 0.37
RAPGEF1-202ENST00000372190 ISY1Q9ULR0 285 aaKnown RBP17.39■□□□□ 0.37
RAPGEF1-202ENST00000372190 SYNJ1O43426 1573 aa17.39■□□□□ 0.37
RAPGEF1-202ENST00000372190 CCDC70Q6NSX1 233 aa17.39■□□□□ 0.37
RAPGEF1-202ENST00000372190 IPO8O15397 1037 aaKnown RBP17.39■□□□□ 0.37
RAPGEF1-202ENST00000372190 HSP90B1P14625 803 aaKnown RBP17.39■□□□□ 0.37
RAPGEF1-202ENST00000372190 POGZQ7Z3K3 1410 aa17.39■□□□□ 0.37
RAPGEF1-202ENST00000372190 GTF2E1P29083 439 aaPredicted RBP17.38■□□□□ 0.37
RAPGEF1-202ENST00000372190 CASKIN1Q8WXD9 1431 aa17.38■□□□□ 0.37
RAPGEF1-202ENST00000372190 CSPP1Q1MSJ5 1256 aa17.38■□□□□ 0.37
RAPGEF1-202ENST00000372190 PHF14O94880 888 aa17.38■□□□□ 0.37
RAPGEF1-202ENST00000372190 CHMP3Q9Y3E7 222 aa17.38■□□□□ 0.37
RAPGEF1-202ENST00000372190 LMOD3Q0VAK6 560 aa17.37■□□□□ 0.37
RAPGEF1-202ENST00000372190 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.37■□□□□ 0.37
RAPGEF1-202ENST00000372190 IPO9Q96P70 1041 aaKnown RBP17.37■□□□□ 0.37
RAPGEF1-202ENST00000372190 TXNDC2Q86VQ3 553 aa17.36■□□□□ 0.37
RAPGEF1-202ENST00000372190 FYCO1Q9BQS8 1478 aa17.36■□□□□ 0.37
RAPGEF1-202ENST00000372190 DHX57Q6P158 1386 aaKnown RBP17.35■□□□□ 0.37
RAPGEF1-202ENST00000372190 TOP2BQ02880 1626 aa17.34■□□□□ 0.37
RAPGEF1-202ENST00000372190 FGD6Q6ZV73 1430 aa17.34■□□□□ 0.37
RAPGEF1-202ENST00000372190 PROSER2Q86WR7 435 aaPredicted RBP17.34■□□□□ 0.37
RAPGEF1-202ENST00000372190 CGNL1Q0VF96 1302 aa17.34■□□□□ 0.37
RAPGEF1-202ENST00000372190 GSE1Q14687 1217 aa17.34■□□□□ 0.37
RAPGEF1-202ENST00000372190 THEMISQ8N1K5 641 aaPredicted RBP17.34■□□□□ 0.37
RAPGEF1-202ENST00000372190 SLKQ9H2G2 1235 aaPredicted RBP17.33■□□□□ 0.36
RAPGEF1-202ENST00000372190 PDE4CQ08493 712 aa17.33■□□□□ 0.36
RAPGEF1-202ENST00000372190 GNL2Q13823 731 aaKnown RBP17.33■□□□□ 0.36
RAPGEF1-202ENST00000372190 NCOA2Q15596 1464 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms