RNA–Protein interactions for RNA: ENST00000367094.6

TULP4-201, Transcript of tubby like protein 4, humanhuman

TSL 1 (best) BASIC

Gene TULP4, Length 5,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4-201ENST00000367094 PLEKHG5O94827 1062 aa12.82□□□□□ -0.36
TULP4-201ENST00000367094 ITPRIPQ8IWB1 547 aa12.81□□□□□ -0.36
TULP4-201ENST00000367094 GBP4Q96PP9 640 aa12.81□□□□□ -0.36
TULP4-201ENST00000367094 TSHZ2Q9NRE2 1034 aa12.8□□□□□ -0.36
TULP4-201ENST00000367094 EID1Q9Y6B2 187 aa12.8□□□□□ -0.36
TULP4-201ENST00000367094 CNTLNQ9NXG0 1405 aa12.8□□□□□ -0.36
TULP4-201ENST00000367094 HMMRO75330 724 aa12.8□□□□□ -0.36
TULP4-201ENST00000367094 KIAA2012Q0VF49 1180 aa12.8□□□□□ -0.36
TULP4-201ENST00000367094 EVC2Q86UK5 1308 aa12.8□□□□□ -0.36
TULP4-201ENST00000367094 PANK3Q9H999 370 aa12.8□□□□□ -0.36
TULP4-201ENST00000367094 PRDM2Q13029 1718 aa12.8□□□□□ -0.36
TULP4-201ENST00000367094 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.8□□□□□ -0.36
TULP4-201ENST00000367094 CGNL1Q0VF96 1302 aa12.79□□□□□ -0.36
TULP4-201ENST00000367094 E9PSI1 815 aa12.79□□□□□ -0.36
TULP4-201ENST00000367094 HTATSF1O43719 755 aaKnown RBP12.79□□□□□ -0.36
TULP4-201ENST00000367094 SMC4Q9NTJ3 1288 aa12.79□□□□□ -0.36
TULP4-201ENST00000367094 CCDC7Q96M83 1385 aa12.79□□□□□ -0.36
TULP4-201ENST00000367094 IFT140Q96RY7 1462 aa12.79□□□□□ -0.36
TULP4-201ENST00000367094 ANKRD50Q9ULJ7 1429 aa12.79□□□□□ -0.36
TULP4-201ENST00000367094 HECW1Q76N89 1606 aa12.79□□□□□ -0.36
TULP4-201ENST00000367094 PLCB2Q00722 1185 aa12.79□□□□□ -0.36
TULP4-201ENST00000367094 IPO9Q96P70 1041 aaKnown RBP12.79□□□□□ -0.36
TULP4-201ENST00000367094 STK31Q9BXU1 1019 aa12.78□□□□□ -0.36
TULP4-201ENST00000367094 MRC2Q9UBG0 1479 aa12.78□□□□□ -0.36
TULP4-201ENST00000367094 CENPQQ7L2Z9 268 aaPredicted RBP12.78□□□□□ -0.36
TULP4-201ENST00000367094 TIAM1Q13009 1591 aa12.78□□□□□ -0.36
TULP4-201ENST00000367094 DNMBPQ6XZF7 1577 aa12.77□□□□□ -0.36
TULP4-201ENST00000367094 KIAA1211Q6ZU35 1233 aa12.76□□□□□ -0.37
TULP4-201ENST00000367094 SYNJ2O15056 1496 aa12.76□□□□□ -0.37
TULP4-201ENST00000367094 PLEKHH2Q8IVE3 1493 aa12.76□□□□□ -0.37
TULP4-201ENST00000367094 CCDC34Q96HJ3 373 aa12.76□□□□□ -0.37
TULP4-201ENST00000367094 TOPBP1Q92547 1522 aa12.76□□□□□ -0.37
TULP4-201ENST00000367094 RRP1P56182 461 aaKnown RBP12.75□□□□□ -0.37
TULP4-201ENST00000367094 AQRO60306 1485 aaKnown RBP eCLIP12.74□□□□□ -0.373e-6■■■■□ 25.1
TULP4-201ENST00000367094 DEKP35659 375 aaKnown RBP12.74□□□□□ -0.37
TULP4-201ENST00000367094 HFM1A2PYH4 1435 aa12.74□□□□□ -0.37
TULP4-201ENST00000367094 AAMPQ13685 434 aa12.73□□□□□ -0.37
TULP4-201ENST00000367094 GPATCH3Q96I76 525 aa12.73□□□□□ -0.37
TULP4-201ENST00000367094 TRAK1Q9UPV9 953 aa12.73□□□□□ -0.37
TULP4-201ENST00000367094 SYAP1Q96A49 352 aaPredicted RBP12.73□□□□□ -0.37
TULP4-201ENST00000367094 SUPT6HQ7KZ85 1726 aaKnown RBP12.72□□□□□ -0.37
TULP4-201ENST00000367094 SOX12O15370 315 aa12.72□□□□□ -0.37
TULP4-201ENST00000367094 CCDC146Q8IYE0 955 aa12.72□□□□□ -0.37
TULP4-201ENST00000367094 BRD4O60885 1362 aaPredicted RBP12.72□□□□□ -0.37
TULP4-201ENST00000367094 MAP3K1Q13233 1512 aa12.71□□□□□ -0.37
TULP4-201ENST00000367094 TRHP20396 242 aaPredicted RBP12.71□□□□□ -0.37
TULP4-201ENST00000367094 POLA1P09884 1462 aaPredicted RBP12.71□□□□□ -0.37
TULP4-201ENST00000367094 KIF7Q2M1P5 1343 aa12.71□□□□□ -0.37
TULP4-201ENST00000367094 TPM4P67936 248 aa12.71□□□□□ -0.38
TULP4-201ENST00000367094 DRC7Q8IY82 874 aa12.7□□□□□ -0.38
TULP4-201ENST00000367094 WASHC2AQ641Q2 1341 aa12.7□□□□□ -0.38
TULP4-201ENST00000367094 CUL7Q14999 1698 aa12.7□□□□□ -0.38
TULP4-201ENST00000367094 CC2D2AQ9P2K1 1620 aa12.69□□□□□ -0.38
TULP4-201ENST00000367094 ZKSCAN2Q63HK3 967 aa12.69□□□□□ -0.38
TULP4-201ENST00000367094 ARHGAP5Q13017 1502 aa12.69□□□□□ -0.38
TULP4-201ENST00000367094 PAK3O75914 559 aaPredicted RBP12.69□□□□□ -0.38
TULP4-201ENST00000367094 FAM161AQ3B820 660 aa12.69□□□□□ -0.38
TULP4-201ENST00000367094 TROQ12816 1431 aaPredicted RBP12.69□□□□□ -0.38
TULP4-201ENST00000367094 GOLGA6L1Q8N7Z2 621 aa12.69□□□□□ -0.38
TULP4-201ENST00000367094 NGDNQ8NEJ9 315 aaKnown RBP12.69□□□□□ -0.38
TULP4-201ENST00000367094 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.69□□□□□ -0.38
TULP4-201ENST00000367094 TNNT3P45378 269 aaPredicted RBP12.68□□□□□ -0.38
TULP4-201ENST00000367094 COG3Q96JB2 828 aa12.68□□□□□ -0.38
TULP4-201ENST00000367094 ABCA10Q8WWZ4 1543 aa12.68□□□□□ -0.38
TULP4-201ENST00000367094 SCAPERQ9BY12 1400 aa12.68□□□□□ -0.38
TULP4-201ENST00000367094 OSCARQ8IYS5 282 aa12.68□□□□□ -0.38
TULP4-201ENST00000367094 KIAA1107Q9UPP5 1409 aa12.68□□□□□ -0.38
TULP4-201ENST00000367094 PEG3Q9GZU2 1588 aa12.67□□□□□ -0.38
TULP4-201ENST00000367094 NPHP1O15259 732 aa12.67□□□□□ -0.38
TULP4-201ENST00000367094 CSPP1Q1MSJ5 1256 aa12.67□□□□□ -0.38
TULP4-201ENST00000367094 AMPHP49418 695 aa12.67□□□□□ -0.38
TULP4-201ENST00000367094 FANCIQ9NVI1 1328 aa12.67□□□□□ -0.38
TULP4-201ENST00000367094 TULP1O00294 542 aaPredicted RBP12.66□□□□□ -0.38
TULP4-201ENST00000367094 ZNF644Q9H582 1327 aaPredicted RBP12.66□□□□□ -0.38
TULP4-201ENST00000367094 MFAP1P55081 439 aaKnown RBP12.66□□□□□ -0.38
TULP4-201ENST00000367094 NOC3LQ8WTT2 800 aaKnown RBP12.66□□□□□ -0.38
TULP4-201ENST00000367094 NAP1L2Q9ULW6 460 aaPredicted RBP12.66□□□□□ -0.38
TULP4-201ENST00000367094 ROCK1Q13464 1354 aa12.65□□□□□ -0.38
TULP4-201ENST00000367094 CSB-PGBD3P0DP91 1061 aa12.65□□□□□ -0.38
TULP4-201ENST00000367094 LAMC3Q9Y6N6 1575 aa12.65□□□□□ -0.38
TULP4-201ENST00000367094 C9orf84Q5VXU9 1444 aa12.64□□□□□ -0.39
TULP4-201ENST00000367094 GNL2Q13823 731 aaKnown RBP12.64□□□□□ -0.39
TULP4-201ENST00000367094 RUNDC1Q96C34 613 aa12.64□□□□□ -0.39
TULP4-201ENST00000367094 DDX19BQ9UMR2 479 aa12.64□□□□□ -0.39
TULP4-201ENST00000367094 ST18O60284 1047 aa12.64□□□□□ -0.39
TULP4-201ENST00000367094 PDE4AP27815 886 aa12.64□□□□□ -0.39
TULP4-201ENST00000367094 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.63□□□□□ -0.394e-7■■■■□ 19.8
TULP4-201ENST00000367094 PRG4Q92954 1404 aaPredicted RBP12.63□□□□□ -0.39
TULP4-201ENST00000367094 DDX11L8A8MPP1 907 aa12.63□□□□□ -0.39
TULP4-201ENST00000367094 DIAPH1O60610 1272 aaKnown RBP12.63□□□□□ -0.39
TULP4-201ENST00000367094 CLUAP1Q96AJ1 413 aa12.63□□□□□ -0.39
TULP4-201ENST00000367094 CHMP4CQ96CF2 233 aa12.63□□□□□ -0.39
TULP4-201ENST00000367094 APBB1O00213 710 aa12.62□□□□□ -0.39
TULP4-201ENST00000367094 KIAA0586Q9BVV6 1533 aa12.62□□□□□ -0.39
TULP4-201ENST00000367094 SPRYD3Q8NCJ5 442 aa12.62□□□□□ -0.39
TULP4-201ENST00000367094 EXOC6Q8TAG9 804 aa12.62□□□□□ -0.39
TULP4-201ENST00000367094 CRBNQ96SW2 442 aa12.62□□□□□ -0.39
TULP4-201ENST00000367094 DAPK1P53355 1430 aa12.62□□□□□ -0.39
TULP4-201ENST00000367094 API5Q9BZZ5 524 aaKnown RBP12.62□□□□□ -0.39
TULP4-201ENST00000367094 GOLGA6L3A6NEY3 463 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms