RNA–Protein interactions for RNA: ENST00000355648.8

PHACTR3-201, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-201ENST00000355648 LETM1O95202 739 aaPredicted RBP13.95□□□□□ -0.18
PHACTR3-201ENST00000355648 HSP90B1P14625 803 aaKnown RBP13.95□□□□□ -0.18
PHACTR3-201ENST00000355648 POGKQ9P215 609 aa13.95□□□□□ -0.18
PHACTR3-201ENST00000355648 PBRM1Q86U86 1689 aa13.94□□□□□ -0.18
PHACTR3-201ENST00000355648 ARID3AQ99856 593 aa13.94□□□□□ -0.18
PHACTR3-201ENST00000355648 IGSF3O75054 1194 aa13.93□□□□□ -0.18
PHACTR3-201ENST00000355648 IRX3P78415 501 aaPredicted RBP13.93□□□□□ -0.18
PHACTR3-201ENST00000355648 RGS22Q8NE09 1264 aa13.93□□□□□ -0.18
PHACTR3-201ENST00000355648 GRIN2BQ13224 1484 aa13.93□□□□□ -0.18
PHACTR3-201ENST00000355648 VPS8Q8N3P4 1428 aa13.93□□□□□ -0.18
PHACTR3-201ENST00000355648 CDK11BP21127 795 aaKnown RBP13.92□□□□□ -0.18
PHACTR3-201ENST00000355648 ECM2O94769 699 aaPredicted RBP13.92□□□□□ -0.18
PHACTR3-201ENST00000355648 ZSCAN20P17040 1043 aaPredicted RBP13.92□□□□□ -0.18
PHACTR3-201ENST00000355648 VGLL3A8MV65 326 aa13.91□□□□□ -0.18
PHACTR3-201ENST00000355648 RIPK4P57078 832 aa13.91□□□□□ -0.18
PHACTR3-201ENST00000355648 TRIM44Q96DX7 344 aaPredicted RBP13.91□□□□□ -0.18
PHACTR3-201ENST00000355648 ARHGAP35Q9NRY4 1499 aa13.9□□□□□ -0.18
PHACTR3-201ENST00000355648 MRE11P49959 708 aa13.9□□□□□ -0.18
PHACTR3-201ENST00000355648 ARAP1Q96P48 1450 aa13.9□□□□□ -0.18
PHACTR3-201ENST00000355648 RGL2O15211 777 aa13.9□□□□□ -0.18
PHACTR3-201ENST00000355648 ISY1Q9ULR0 285 aaKnown RBP13.9□□□□□ -0.18
PHACTR3-201ENST00000355648 FHAD1B1AJZ9 1412 aa13.89□□□□□ -0.19
PHACTR3-201ENST00000355648 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.89□□□□□ -0.19
PHACTR3-201ENST00000355648 MYH16Q9H6N6 1097 aa13.89□□□□□ -0.19
PHACTR3-201ENST00000355648 EIF4G3O43432 1585 aaKnown RBP13.88□□□□□ -0.19
PHACTR3-201ENST00000355648 OFD1O75665 1012 aa13.88□□□□□ -0.19
PHACTR3-201ENST00000355648 FAM13BQ9NYF5 915 aa13.88□□□□□ -0.19
PHACTR3-201ENST00000355648 SLC4A3P48751 1232 aa13.87□□□□□ -0.19
PHACTR3-201ENST00000355648 DNTTIP2Q5QJE6 756 aaKnown RBP13.87□□□□□ -0.19
PHACTR3-201ENST00000355648 SLC20A2Q08357 652 aa13.86□□□□□ -0.19
PHACTR3-201ENST00000355648 NECTIN2Q92692 538 aa13.86□□□□□ -0.19
PHACTR3-201ENST00000355648 CCDC94Q9BW85 323 aaPredicted RBP13.86□□□□□ -0.19
PHACTR3-201ENST00000355648 NUDCQ9Y266 331 aa13.86□□□□□ -0.19
PHACTR3-201ENST00000355648 ADAMTS12P58397 1594 aa13.86□□□□□ -0.19
PHACTR3-201ENST00000355648 CTTNBP2Q8WZ74 1663 aa13.85□□□□□ -0.19
PHACTR3-201ENST00000355648 CLGNO14967 610 aa13.85□□□□□ -0.19
PHACTR3-201ENST00000355648 MMP14P50281 582 aa13.85□□□□□ -0.19
PHACTR3-201ENST00000355648 ATF5Q9Y2D1 282 aaPredicted RBP13.85□□□□□ -0.19
PHACTR3-201ENST00000355648 AKNAQ7Z591 1439 aa13.84□□□□□ -0.19
PHACTR3-201ENST00000355648 ERBB4Q15303 1308 aa13.84□□□□□ -0.19
PHACTR3-201ENST00000355648 C1orf115Q9H7X2 142 aa13.84□□□□□ -0.19
PHACTR3-201ENST00000355648 PRDM10Q9NQV6 1147 aa13.84□□□□□ -0.19
PHACTR3-201ENST00000355648 MAPKBP1O60336 1514 aa13.84□□□□□ -0.19
PHACTR3-201ENST00000355648 SNAPC4Q5SXM2 1469 aa13.83□□□□□ -0.19
PHACTR3-201ENST00000355648 DYNC1I1O14576 645 aa13.83□□□□□ -0.2
PHACTR3-201ENST00000355648 P3H3Q8IVL6 736 aa13.83□□□□□ -0.2
PHACTR3-201ENST00000355648 PANK2Q9BZ23 570 aa13.83□□□□□ -0.2
PHACTR3-201ENST00000355648 MAGI1Q96QZ7 1491 aaPredicted RBP13.79□□□□□ -0.2
PHACTR3-201ENST00000355648 ZBTB7CA1YPR0 619 aa13.79□□□□□ -0.2
PHACTR3-201ENST00000355648 CNPY4Q8N129 248 aa13.79□□□□□ -0.2
PHACTR3-201ENST00000355648 DNAJC2Q99543 621 aaKnown RBP13.79□□□□□ -0.2
PHACTR3-201ENST00000355648 PTMSP20962 102 aa13.78□□□□□ -0.2
PHACTR3-201ENST00000355648 AXDND1Q5T1B0 1012 aaPredicted RBP13.78□□□□□ -0.2
PHACTR3-201ENST00000355648 CHMP7Q8WUX9 453 aaPredicted RBP13.77□□□□□ -0.21
PHACTR3-201ENST00000355648 EFCAB5A4FU69 1503 aa13.77□□□□□ -0.21
PHACTR3-201ENST00000355648 PHLDB1Q86UU1 1377 aa13.77□□□□□ -0.21
PHACTR3-201ENST00000355648 FHOD3Q2V2M9 1422 aa13.76□□□□□ -0.21
PHACTR3-201ENST00000355648 GRIN2AQ12879 1464 aa13.76□□□□□ -0.21
PHACTR3-201ENST00000355648 GRPEL1Q9HAV7 217 aa13.76□□□□□ -0.21
PHACTR3-201ENST00000355648 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.75□□□□□ -0.21
PHACTR3-201ENST00000355648 SYNJ2O15056 1496 aa13.75□□□□□ -0.21
PHACTR3-201ENST00000355648 ZSCAN30Q86W11 494 aa13.75□□□□□ -0.21
PHACTR3-201ENST00000355648 FAM9BQ8IZU0 186 aa13.75□□□□□ -0.21
PHACTR3-201ENST00000355648 ZNF622Q969S3 477 aaKnown RBP eCLIP13.75□□□□□ -0.21
PHACTR3-201ENST00000355648 HDAC5Q9UQL6 1122 aa13.75□□□□□ -0.21
PHACTR3-201ENST00000355648 RRBP1Q9P2E9 1410 aaKnown RBP13.75□□□□□ -0.21
PHACTR3-201ENST00000355648 IQGAP2Q13576 1575 aa13.73□□□□□ -0.21
PHACTR3-201ENST00000355648 PROM2Q8N271 834 aa13.73□□□□□ -0.21
PHACTR3-201ENST00000355648 HIRIP3Q9BW71 556 aaPredicted RBP13.73□□□□□ -0.21
PHACTR3-201ENST00000355648 SAMD9Q5K651 1589 aa13.73□□□□□ -0.21
PHACTR3-201ENST00000355648 UQCRHLA0A096LP55 91 aa13.72□□□□□ -0.21
PHACTR3-201ENST00000355648 PTMAP06454 111 aaKnown RBP13.72□□□□□ -0.21
PHACTR3-201ENST00000355648 UQCRHP07919 91 aa13.72□□□□□ -0.21
PHACTR3-201ENST00000355648 CHGAP10645 457 aaKnown RBP13.72□□□□□ -0.21
PHACTR3-201ENST00000355648 NEUROD2Q15784 382 aa13.72□□□□□ -0.21
PHACTR3-201ENST00000355648 KANK4Q5T7N3 995 aaPredicted RBP13.72□□□□□ -0.21
PHACTR3-201ENST00000355648 KCNG1Q9UIX4 513 aa13.72□□□□□ -0.21
PHACTR3-201ENST00000355648 WWC1Q8IX03 1113 aa13.72□□□□□ -0.21
PHACTR3-201ENST00000355648 MSNP26038 577 aaKnown RBP13.71□□□□□ -0.21
PHACTR3-201ENST00000355648 KIAA0586Q9BVV6 1533 aa13.71□□□□□ -0.21
PHACTR3-201ENST00000355648 MAPK8IP2Q13387 824 aaPredicted RBP13.71□□□□□ -0.22
PHACTR3-201ENST00000355648 BECN1Q14457 450 aa13.71□□□□□ -0.22
PHACTR3-201ENST00000355648 FAM161AQ3B820 660 aa13.71□□□□□ -0.22
PHACTR3-201ENST00000355648 YY1AP1Q9H869 796 aa13.71□□□□□ -0.22
PHACTR3-201ENST00000355648 MRS2Q9HD23 443 aa13.71□□□□□ -0.22
PHACTR3-201ENST00000355648 APPP05067 770 aa13.7□□□□□ -0.22
PHACTR3-201ENST00000355648 PSEN1P49768 467 aa13.69□□□□□ -0.22
PHACTR3-201ENST00000355648 R3HCC1Q9Y3T6 440 aaKnown RBP13.69□□□□□ -0.22
PHACTR3-201ENST00000355648 FAM193AP78312 1265 aa13.68□□□□□ -0.22
PHACTR3-201ENST00000355648 FMN1Q68DA7 1419 aa13.68□□□□□ -0.22
PHACTR3-201ENST00000355648 SPDYE4A6NLX3 237 aa13.68□□□□□ -0.22
PHACTR3-201ENST00000355648 IRX5P78411 483 aaPredicted RBP13.68□□□□□ -0.22
PHACTR3-201ENST00000355648 CCDC173Q0VFZ6 552 aa13.68□□□□□ -0.22
PHACTR3-201ENST00000355648 CGNQ9P2M7 1197 aaKnown RBP13.68□□□□□ -0.22
PHACTR3-201ENST00000355648 ATP1B4Q9UN42 357 aaPredicted RBP13.68□□□□□ -0.22
PHACTR3-201ENST00000355648 RRP1P56182 461 aaKnown RBP13.67□□□□□ -0.22
PHACTR3-201ENST00000355648 CSPP1Q1MSJ5 1256 aa13.67□□□□□ -0.22
PHACTR3-201ENST00000355648 CEP170Q5SW79 1584 aa13.67□□□□□ -0.22
PHACTR3-201ENST00000355648 UGGT2Q9NYU1 1516 aa13.67□□□□□ -0.22
PHACTR3-201ENST00000355648 CCDC184Q52MB2 194 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms