RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 CNGB1Q14028 1251 aaPredicted RBP33.2■■■□□ 2.91
CPNE1-202ENST00000352393 TRPM1Q7Z4N2 1603 aa33.2■■■□□ 2.91
CPNE1-202ENST00000352393 BRD4O60885 1362 aaPredicted RBP33.18■■■□□ 2.9
CPNE1-202ENST00000352393 ST20-MTHFSA0A0A6YYL1 179 aa33.16■■■□□ 2.9
CPNE1-202ENST00000352393 TMC1Q8TDI8 760 aa33.16■■■□□ 2.9
CPNE1-202ENST00000352393 HNRNPMP52272 730 aaKnown RBP eCLIP33.14■■■□□ 2.91e-7■■■■□ 25.4
CPNE1-202ENST00000352393 UNC13BO14795 1591 aa33.14■■■□□ 2.89
CPNE1-202ENST00000352393 ERICH6Q7L0X2 663 aa33.13■■■□□ 2.89
CPNE1-202ENST00000352393 MYBBP1AQ9BQG0 1328 aaKnown RBP33.13■■■□□ 2.89
CPNE1-202ENST00000352393 DCAF11Q8TEB1 546 aa33.12■■■□□ 2.89
CPNE1-202ENST00000352393 MAST1Q9Y2H9 1570 aa33.12■■■□□ 2.89
CPNE1-202ENST00000352393 KDM2AQ9Y2K7 1162 aa33.11■■■□□ 2.89
CPNE1-202ENST00000352393 PRAG1Q86YV5 1406 aa33.11■■■□□ 2.89
CPNE1-202ENST00000352393 RALBP1Q15311 655 aa33.1■■■□□ 2.89
CPNE1-202ENST00000352393 LAMC1P11047 1609 aa33.09■■■□□ 2.89
CPNE1-202ENST00000352393 CCDC144AA2RUR9 1427 aa33.04■■■□□ 2.88
CPNE1-202ENST00000352393 SYCP2Q9BX26 1530 aa33.03■■■□□ 2.88
CPNE1-202ENST00000352393 CCDC136Q96JN2 1154 aa33.02■■■□□ 2.88
CPNE1-202ENST00000352393 GPRASP1Q5JY77 1395 aa33.01■■■□□ 2.88
CPNE1-202ENST00000352393 PARD3Q8TEW0 1356 aa33.01■■■□□ 2.88
CPNE1-202ENST00000352393 RSPH4AQ5TD94 716 aa33.01■■■□□ 2.88
CPNE1-202ENST00000352393 PLXNC1O60486 1568 aa33■■■□□ 2.87
CPNE1-202ENST00000352393 TTC37Q6PGP7 1564 aa33■■■□□ 2.87
CPNE1-202ENST00000352393 IQGAP3Q86VI3 1631 aa33■■■□□ 2.87
CPNE1-202ENST00000352393 MYO5CQ9NQX4 1742 aa33■■■□□ 2.87
CPNE1-202ENST00000352393 PLA2R1Q13018 1463 aa33■■■□□ 2.87
CPNE1-202ENST00000352393 PRDM15P57071 1507 aaPredicted RBP32.99■■■□□ 2.87
CPNE1-202ENST00000352393 A2MP01023 1474 aa32.98■■■□□ 2.87
CPNE1-202ENST00000352393 COL17A1Q9UMD9 1497 aaPredicted RBP32.97■■■□□ 2.87
CPNE1-202ENST00000352393 SENP3-EIF4A1A0A087X0R7 540 aa32.96■■■□□ 2.87
CPNE1-202ENST00000352393 BCL11AQ9H165 835 aa32.95■■■□□ 2.86
CPNE1-202ENST00000352393 EIF2AK4Q9P2K8 1649 aaKnown RBP32.94■■■□□ 2.86
CPNE1-202ENST00000352393 ARHGAP5Q13017 1502 aa32.93■■■□□ 2.86
CPNE1-202ENST00000352393 NLRP13Q86W25 1043 aa32.92■■■□□ 2.86
CPNE1-202ENST00000352393 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.92■■■□□ 2.861e-38■■□□□ 13.2
CPNE1-202ENST00000352393 MAGI2Q86UL8 1455 aa32.88■■■□□ 2.85
CPNE1-202ENST00000352393 SHROOM2Q13796 1616 aa32.87■■■□□ 2.85
CPNE1-202ENST00000352393 ZMYM4Q5VZL5 1548 aa32.86■■■□□ 2.85
CPNE1-202ENST00000352393 PER1O15534 1290 aaPredicted RBP32.86■■■□□ 2.85
CPNE1-202ENST00000352393 RRP1P56182 461 aaKnown RBP32.86■■■□□ 2.85
CPNE1-202ENST00000352393 CHD1O14646 1710 aa32.86■■■□□ 2.85
CPNE1-202ENST00000352393 ATP10AO60312 1499 aa32.86■■■□□ 2.85
CPNE1-202ENST00000352393 NBPF1Q3BBV0 1214 aa32.86■■■□□ 2.85
CPNE1-202ENST00000352393 RNF17Q9BXT8 1623 aaKnown RBP32.86■■■□□ 2.85
CPNE1-202ENST00000352393 PLEKHH2Q8IVE3 1493 aa32.85■■■□□ 2.85
CPNE1-202ENST00000352393 NOP58Q9Y2X3 529 aaKnown RBP32.84■■■□□ 2.85
CPNE1-202ENST00000352393 INSRP06213 1382 aa32.83■■■□□ 2.85
CPNE1-202ENST00000352393 DUOX2Q9NRD8 1548 aa32.83■■■□□ 2.85
CPNE1-202ENST00000352393 MYT1LQ9UL68 1186 aa32.83■■■□□ 2.85
CPNE1-202ENST00000352393 DISP3Q9P2K9 1392 aa32.82■■■□□ 2.84
CPNE1-202ENST00000352393 PDE3BQ13370 1112 aa32.81■■■□□ 2.84
CPNE1-202ENST00000352393 WASHC2CQ9Y4E1 1318 aa32.81■■■□□ 2.84
CPNE1-202ENST00000352393 TESK2Q96S53 571 aa32.8■■■□□ 2.84
CPNE1-202ENST00000352393 BLMP54132 1417 aaPredicted RBP32.79■■■□□ 2.84
CPNE1-202ENST00000352393 RGL3Q3MIN7 710 aa32.79■■■□□ 2.84
CPNE1-202ENST00000352393 ERBINQ96RT1 1412 aa32.78■■■□□ 2.84
CPNE1-202ENST00000352393 RCAN3Q9UKA8 241 aa32.78■■■□□ 2.84
CPNE1-202ENST00000352393 ABCC2Q92887 1545 aa32.77■■■□□ 2.84
CPNE1-202ENST00000352393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.72■■■□□ 2.839e-9■□□□□ 10.7
CPNE1-202ENST00000352393 PAK3O75914 559 aaPredicted RBP32.71■■■□□ 2.83
CPNE1-202ENST00000352393 EXOC6Q8TAG9 804 aa32.71■■■□□ 2.83
CPNE1-202ENST00000352393 ANP32AP39687 249 aaKnown RBP32.71■■■□□ 2.83
CPNE1-202ENST00000352393 IPO9Q96P70 1041 aaKnown RBP32.68■■■□□ 2.82
CPNE1-202ENST00000352393 IQGAP1P46940 1657 aa32.67■■■□□ 2.82
CPNE1-202ENST00000352393 MADDQ8WXG6 1647 aa32.66■■■□□ 2.82
CPNE1-202ENST00000352393 SALL2Q9Y467 1007 aaPredicted RBP32.65■■■□□ 2.82
CPNE1-202ENST00000352393 ERCC6L2Q5T890 1561 aa32.64■■■□□ 2.82
CPNE1-202ENST00000352393 PANK3Q9H999 370 aa32.64■■■□□ 2.82
CPNE1-202ENST00000352393 ABCC1P33527 1531 aa32.64■■■□□ 2.82
CPNE1-202ENST00000352393 TMF1P82094 1093 aa32.63■■■□□ 2.81
CPNE1-202ENST00000352393 CC2D1BQ5T0F9 858 aaKnown RBP32.63■■■□□ 2.81
CPNE1-202ENST00000352393 CDCA7LQ96GN5 454 aa32.61■■■□□ 2.81
CPNE1-202ENST00000352393 PLCH2O75038 1416 aa32.6■■■□□ 2.81
CPNE1-202ENST00000352393 SPHKAPQ2M3C7 1700 aa32.6■■■□□ 2.81
CPNE1-202ENST00000352393 TCERG1O14776 1098 aaKnown RBP32.59■■■□□ 2.81
CPNE1-202ENST00000352393 WDR7Q9Y4E6 1490 aa32.58■■■□□ 2.81
CPNE1-202ENST00000352393 ZCCHC11Q5TAX3 1644 aaKnown RBP32.57■■■□□ 2.8
CPNE1-202ENST00000352393 CEP152O94986 1710 aa32.57■■■□□ 2.8
CPNE1-202ENST00000352393 TRPM2O94759 1503 aa32.55■■■□□ 2.8
CPNE1-202ENST00000352393 SYNMO15061 1565 aa32.53■■■□□ 2.8
CPNE1-202ENST00000352393 DEKP35659 375 aaKnown RBP32.5■■■□□ 2.79
CPNE1-202ENST00000352393 ZBTB47Q9UFB7 747 aaPredicted RBP32.5■■■□□ 2.79
CPNE1-202ENST00000352393 TRAPPC8Q9Y2L5 1435 aa32.5■■■□□ 2.79
CPNE1-202ENST00000352393 MS4A1P11836 297 aa32.49■■■□□ 2.79
CPNE1-202ENST00000352393 DEPDC5O75140 1603 aa32.48■■■□□ 2.79
CPNE1-202ENST00000352393 MYOM1P52179 1685 aa32.46■■■□□ 2.79
CPNE1-202ENST00000352393 ZFYVE16Q7Z3T8 1539 aa32.46■■■□□ 2.79
CPNE1-202ENST00000352393 CLASP1Q7Z460 1538 aa32.46■■■□□ 2.79
CPNE1-202ENST00000352393 NBR1Q14596 966 aa32.46■■■□□ 2.79
CPNE1-202ENST00000352393 CLTCL1P53675 1640 aa32.46■■■□□ 2.79
CPNE1-202ENST00000352393 UHRF1BP1LA0JNW5 1464 aa32.46■■■□□ 2.79
CPNE1-202ENST00000352393 EFCAB2Q5VUJ9 269 aa32.45■■■□□ 2.79
CPNE1-202ENST00000352393 SCAPERQ9BY12 1400 aa32.45■■■□□ 2.79
CPNE1-202ENST00000352393 PTPRTO14522 1441 aa32.44■■■□□ 2.78
CPNE1-202ENST00000352393 PDE4AP27815 886 aa32.44■■■□□ 2.78
CPNE1-202ENST00000352393 SCAF11Q99590 1463 aaKnown RBP32.44■■■□□ 2.78
CPNE1-202ENST00000352393 PLIN1O60240 522 aa32.42■■■□□ 2.78
CPNE1-202ENST00000352393 BACH2Q9BYV9 841 aa32.42■■■□□ 2.78
CPNE1-202ENST00000352393 TET3O43151 1660 aa32.42■■■□□ 2.78
CPNE1-202ENST00000352393 ARAP3Q8WWN8 1544 aa32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms