RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 AMPHP49418 695 aa13.86□□□□□ -0.19
CLCN6-202ENST00000346436 BICRAQ9NZM4 1560 aa13.86□□□□□ -0.19
CLCN6-202ENST00000346436 IPO9Q96P70 1041 aaKnown RBP13.86□□□□□ -0.19
CLCN6-202ENST00000346436 NESP48681 1621 aa13.85□□□□□ -0.19
CLCN6-202ENST00000346436 BECN1Q14457 450 aa13.85□□□□□ -0.19
CLCN6-202ENST00000346436 SPRYD3Q8NCJ5 442 aa13.85□□□□□ -0.19
CLCN6-202ENST00000346436 NBPF8Q3BBV2 869 aa13.84□□□□□ -0.19
CLCN6-202ENST00000346436 TAF7LQ5H9L4 462 aa13.84□□□□□ -0.19
CLCN6-202ENST00000346436 CNTLNQ9NXG0 1405 aa13.83□□□□□ -0.19
CLCN6-202ENST00000346436 VGFO15240 615 aaPredicted RBP13.83□□□□□ -0.19
CLCN6-202ENST00000346436 NLRP13Q86W25 1043 aa13.83□□□□□ -0.2
CLCN6-202ENST00000346436 KLHL34Q8N239 644 aa13.83□□□□□ -0.2
CLCN6-202ENST00000346436 KCNJ4P48050 445 aa13.83□□□□□ -0.2
CLCN6-202ENST00000346436 PANK3Q9H999 370 aa13.82□□□□□ -0.2
CLCN6-202ENST00000346436 AQRO60306 1485 aaKnown RBP eCLIP13.82□□□□□ -0.27e-7■■■■■ 36.6
CLCN6-202ENST00000346436 POGZQ7Z3K3 1410 aa13.82□□□□□ -0.2
CLCN6-202ENST00000346436 MYBBP1AQ9BQG0 1328 aaKnown RBP13.82□□□□□ -0.2
CLCN6-202ENST00000346436 FYCO1Q9BQS8 1478 aa13.81□□□□□ -0.2
CLCN6-202ENST00000346436 SLC4A3P48751 1232 aa13.81□□□□□ -0.2
CLCN6-202ENST00000346436 KIF15Q9NS87 1388 aa13.81□□□□□ -0.2
CLCN6-202ENST00000346436 TCERG1O14776 1098 aaKnown RBP13.81□□□□□ -0.2
CLCN6-202ENST00000346436 FANCIQ9NVI1 1328 aa13.79□□□□□ -0.2
CLCN6-202ENST00000346436 RRP1P56182 461 aaKnown RBP13.79□□□□□ -0.2
CLCN6-202ENST00000346436 CLSTN1O94985 981 aa13.78□□□□□ -0.2
CLCN6-202ENST00000346436 PSME1Q06323 249 aa13.77□□□□□ -0.2
CLCN6-202ENST00000346436 GORABQ5T7V8 394 aa13.77□□□□□ -0.2
CLCN6-202ENST00000346436 PCF11O94913 1555 aaKnown RBP13.77□□□□□ -0.21
CLCN6-202ENST00000346436 CRBNQ96SW2 442 aa13.77□□□□□ -0.21
CLCN6-202ENST00000346436 STK31Q9BXU1 1019 aa13.77□□□□□ -0.21
CLCN6-202ENST00000346436 NUTM2DQ5VT03 806 aaPredicted RBP13.77□□□□□ -0.21
CLCN6-202ENST00000346436 UNC13AQ9UPW8 1703 aa13.77□□□□□ -0.21
CLCN6-202ENST00000346436 C11orf95C9JLR9 678 aaPredicted RBP13.76□□□□□ -0.21
CLCN6-202ENST00000346436 PDE4AP27815 886 aa13.76□□□□□ -0.21
CLCN6-202ENST00000346436 C1orf141Q5JVX7 400 aa13.76□□□□□ -0.21
CLCN6-202ENST00000346436 PRDM2Q13029 1718 aa13.75□□□□□ -0.21
CLCN6-202ENST00000346436 SLKQ9H2G2 1235 aaPredicted RBP13.75□□□□□ -0.21
CLCN6-202ENST00000346436 AKNAQ7Z591 1439 aa13.75□□□□□ -0.21
CLCN6-202ENST00000346436 FRAT2O75474 233 aaPredicted RBP13.75□□□□□ -0.21
CLCN6-202ENST00000346436 HFM1A2PYH4 1435 aa13.75□□□□□ -0.21
CLCN6-202ENST00000346436 LMOD3Q0VAK6 560 aa13.75□□□□□ -0.21
CLCN6-202ENST00000346436 CLUAP1Q96AJ1 413 aa13.74□□□□□ -0.21
CLCN6-202ENST00000346436 POLA1P09884 1462 aaPredicted RBP13.74□□□□□ -0.21
CLCN6-202ENST00000346436 RRP7AQ9Y3A4 280 aaKnown RBP13.74□□□□□ -0.21
CLCN6-202ENST00000346436 CCDC144AA2RUR9 1427 aa13.74□□□□□ -0.21
CLCN6-202ENST00000346436 CFAP44Q96MT7 982 aa13.74□□□□□ -0.21
CLCN6-202ENST00000346436 ANO8Q9HCE9 1232 aaPredicted RBP13.73□□□□□ -0.21
CLCN6-202ENST00000346436 NAP1L2Q9ULW6 460 aaPredicted RBP13.73□□□□□ -0.21
CLCN6-202ENST00000346436 CDCA7LQ96GN5 454 aa13.72□□□□□ -0.21
CLCN6-202ENST00000346436 DMRT2Q9Y5R5 561 aa13.72□□□□□ -0.21
CLCN6-202ENST00000346436 GOLGA6L22H0YM25 854 aa13.72□□□□□ -0.21
CLCN6-202ENST00000346436 NAIPQ13075 1403 aa13.72□□□□□ -0.21
CLCN6-202ENST00000346436 NUTM2FA1L443 756 aa13.72□□□□□ -0.21
CLCN6-202ENST00000346436 TPRNQ4KMQ1 711 aa13.72□□□□□ -0.21
CLCN6-202ENST00000346436 LTV1Q96GA3 475 aaPredicted RBP13.72□□□□□ -0.21
CLCN6-202ENST00000346436 TOPBP1Q92547 1522 aa13.71□□□□□ -0.21
CLCN6-202ENST00000346436 THEMISQ8N1K5 641 aaPredicted RBP13.71□□□□□ -0.21
CLCN6-202ENST00000346436 HMGXB3Q12766 1538 aa13.71□□□□□ -0.21
CLCN6-202ENST00000346436 CHMP3Q9Y3E7 222 aa13.71□□□□□ -0.21
CLCN6-202ENST00000346436 PDE3BQ13370 1112 aa13.71□□□□□ -0.22
CLCN6-202ENST00000346436 PROSER2Q86WR7 435 aaPredicted RBP13.71□□□□□ -0.22
CLCN6-202ENST00000346436 IPO8O15397 1037 aaKnown RBP13.7□□□□□ -0.22
CLCN6-202ENST00000346436 TTC5Q8N0Z6 440 aa13.7□□□□□ -0.22
CLCN6-202ENST00000346436 U2AF1L5P0DN76 240 aaPredicted RBP13.7□□□□□ -0.22
CLCN6-202ENST00000346436 U2AF1Q01081 240 aaKnown RBP eCLIP13.7□□□□□ -0.22
CLCN6-202ENST00000346436 CWC22Q9HCG8 908 aaKnown RBP13.7□□□□□ -0.22
CLCN6-202ENST00000346436 BCL2L13Q9BXK5 485 aa13.7□□□□□ -0.22
CLCN6-202ENST00000346436 MAPKBP1O60336 1514 aa13.69□□□□□ -0.22
CLCN6-202ENST00000346436 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.69□□□□□ -0.22
CLCN6-202ENST00000346436 SYTL4Q96C24 671 aaPredicted RBP13.68□□□□□ -0.22
CLCN6-202ENST00000346436 COG3Q96JB2 828 aa13.68□□□□□ -0.22
CLCN6-202ENST00000346436 EFCAB5A4FU69 1503 aa13.68□□□□□ -0.22
CLCN6-202ENST00000346436 NOL10Q9BSC4 688 aaKnown RBP13.68□□□□□ -0.22
CLCN6-202ENST00000346436 TRIM34Q9BYJ4 488 aa13.68□□□□□ -0.22
CLCN6-202ENST00000346436 CTDP1Q9Y5B0 961 aaPredicted RBP13.67□□□□□ -0.22
CLCN6-202ENST00000346436 CDK13Q14004 1512 aaKnown RBP13.67□□□□□ -0.22
CLCN6-202ENST00000346436 NBPF1Q3BBV0 1214 aa13.67□□□□□ -0.22
CLCN6-202ENST00000346436 GZF1Q9H116 711 aaPredicted RBP13.67□□□□□ -0.22
CLCN6-202ENST00000346436 TRAK1Q9UPV9 953 aa13.67□□□□□ -0.22
CLCN6-202ENST00000346436 ANKRD50Q9ULJ7 1429 aa13.67□□□□□ -0.22
CLCN6-202ENST00000346436 MCCP23508 829 aa13.67□□□□□ -0.22
CLCN6-202ENST00000346436 MRC2Q9UBG0 1479 aa13.66□□□□□ -0.22
CLCN6-202ENST00000346436 APAF1O14727 1248 aa13.66□□□□□ -0.22
CLCN6-202ENST00000346436 GPATCH3Q96I76 525 aa13.66□□□□□ -0.22
CLCN6-202ENST00000346436 DNAJC5BQ9UF47 199 aa13.66□□□□□ -0.22
CLCN6-202ENST00000346436 KRI1Q8N9T8 703 aaKnown RBP13.65□□□□□ -0.22
CLCN6-202ENST00000346436 TAOK2Q9UL54 1235 aa13.65□□□□□ -0.22
CLCN6-202ENST00000346436 PEG3Q9GZU2 1588 aa13.65□□□□□ -0.22
CLCN6-202ENST00000346436 EHBP1L1Q8N3D4 1523 aa13.65□□□□□ -0.22
CLCN6-202ENST00000346436 BIVM-ERCC5R4GMW8 1640 aa13.64□□□□□ -0.23
CLCN6-202ENST00000346436 PRG4Q92954 1404 aaPredicted RBP13.64□□□□□ -0.23
CLCN6-202ENST00000346436 ITPRIPQ8IWB1 547 aa13.64□□□□□ -0.23
CLCN6-202ENST00000346436 TRIM44Q96DX7 344 aaPredicted RBP13.64□□□□□ -0.23
CLCN6-202ENST00000346436 GPRASP1Q5JY77 1395 aa13.64□□□□□ -0.23
CLCN6-202ENST00000346436 CC2D2AQ9P2K1 1620 aa13.64□□□□□ -0.23
CLCN6-202ENST00000346436 EVC2Q86UK5 1308 aa13.64□□□□□ -0.23
CLCN6-202ENST00000346436 HSP90AB1P08238 724 aaKnown RBP13.64□□□□□ -0.23
CLCN6-202ENST00000346436 TEFQ10587 303 aa13.64□□□□□ -0.23
CLCN6-202ENST00000346436 ANKLE2Q86XL3 938 aa13.64□□□□□ -0.23
CLCN6-202ENST00000346436 AMOTL1Q8IY63 956 aa13.63□□□□□ -0.23
CLCN6-202ENST00000346436 CENPJQ9HC77 1338 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms