RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 SALL2Q9Y467 1007 aaPredicted RBP15.69■□□□□ 0.1
CSPG4P4Y-201ENST00000333235 ARHGAP5Q13017 1502 aa15.69■□□□□ 0.1
CSPG4P4Y-201ENST00000333235 KTN1Q86UP2 1357 aaKnown RBP15.69■□□□□ 0.1
CSPG4P4Y-201ENST00000333235 KDM5CP41229 1560 aa15.69■□□□□ 0.1
CSPG4P4Y-201ENST00000333235 FANCIQ9NVI1 1328 aa15.69■□□□□ 0.1
CSPG4P4Y-201ENST00000333235 POLR1AO95602 1720 aaPredicted RBP15.69■□□□□ 0.1
CSPG4P4Y-201ENST00000333235 NLRP13Q86W25 1043 aa15.67■□□□□ 0.1
CSPG4P4Y-201ENST00000333235 BRD4O60885 1362 aaPredicted RBP15.67■□□□□ 0.1
CSPG4P4Y-201ENST00000333235 ARHGEF5Q12774 1597 aa15.67■□□□□ 0.1
CSPG4P4Y-201ENST00000333235 BCORL1Q5H9F3 1711 aa15.66■□□□□ 0.1
CSPG4P4Y-201ENST00000333235 KDM5DQ9BY66 1539 aa15.66■□□□□ 0.1
CSPG4P4Y-201ENST00000333235 FAM135AQ9P2D6 1515 aa15.66■□□□□ 0.1
CSPG4P4Y-201ENST00000333235 MYT1LQ9UL68 1186 aa15.66■□□□□ 0.1
CSPG4P4Y-201ENST00000333235 EFCAB2Q5VUJ9 269 aa15.65■□□□□ 0.1
CSPG4P4Y-201ENST00000333235 NBPF1Q3BBV0 1214 aa15.65■□□□□ 0.1
CSPG4P4Y-201ENST00000333235 TMF1P82094 1093 aa15.64■□□□□ 0.09
CSPG4P4Y-201ENST00000333235 CC2D1BQ5T0F9 858 aaKnown RBP15.63■□□□□ 0.09
CSPG4P4Y-201ENST00000333235 PLEKHH2Q8IVE3 1493 aa15.63■□□□□ 0.09
CSPG4P4Y-201ENST00000333235 SYCP2Q9BX26 1530 aa15.62■□□□□ 0.09
CSPG4P4Y-201ENST00000333235 SAMD9LQ8IVG5 1584 aa15.61■□□□□ 0.09
CSPG4P4Y-201ENST00000333235 PRAG1Q86YV5 1406 aa15.61■□□□□ 0.09
CSPG4P4Y-201ENST00000333235 MSH5O43196 834 aa15.59■□□□□ 0.09
CSPG4P4Y-201ENST00000333235 PREX2Q70Z35 1606 aa15.58■□□□□ 0.08
CSPG4P4Y-201ENST00000333235 PANK3Q9H999 370 aa15.58■□□□□ 0.08
CSPG4P4Y-201ENST00000333235 PDE3BQ13370 1112 aa15.57■□□□□ 0.08
CSPG4P4Y-201ENST00000333235 RCAN3Q9UKA8 241 aa15.57■□□□□ 0.08
CSPG4P4Y-201ENST00000333235 ANP32AP39687 249 aaKnown RBP15.56■□□□□ 0.08
CSPG4P4Y-201ENST00000333235 WASHC2CQ9Y4E1 1318 aa15.56■□□□□ 0.08
CSPG4P4Y-201ENST00000333235 SPAG9O60271 1321 aaKnown RBP15.56■□□□□ 0.08
CSPG4P4Y-201ENST00000333235 LRPPRCP42704 1394 aaKnown RBP15.55■□□□□ 0.08
CSPG4P4Y-201ENST00000333235 KNSTRNQ9Y448 316 aa15.55■□□□□ 0.08
CSPG4P4Y-201ENST00000333235 CDCA8Q53HL2 280 aa15.54■□□□□ 0.08
CSPG4P4Y-201ENST00000333235 RNF123Q5XPI4 1314 aa15.54■□□□□ 0.08
CSPG4P4Y-201ENST00000333235 CDC42BPBQ9Y5S2 1711 aa15.54■□□□□ 0.08
CSPG4P4Y-201ENST00000333235 RRP1P56182 461 aaKnown RBP15.54■□□□□ 0.08
CSPG4P4Y-201ENST00000333235 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.53■□□□□ 0.08
CSPG4P4Y-201ENST00000333235 A2MP01023 1474 aa15.53■□□□□ 0.08
CSPG4P4Y-201ENST00000333235 ERBINQ96RT1 1412 aa15.52■□□□□ 0.08
CSPG4P4Y-201ENST00000333235 PARD3Q8TEW0 1356 aa15.52■□□□□ 0.08
CSPG4P4Y-201ENST00000333235 DUOX2Q9NRD8 1548 aa15.52■□□□□ 0.08
CSPG4P4Y-201ENST00000333235 GPRASP1Q5JY77 1395 aa15.52■□□□□ 0.08
CSPG4P4Y-201ENST00000333235 TTC37Q6PGP7 1564 aa15.52■□□□□ 0.07
CSPG4P4Y-201ENST00000333235 ABCC2Q92887 1545 aa15.52■□□□□ 0.07
CSPG4P4Y-201ENST00000333235 WDR43Q15061 677 aaKnown RBP eCLIP15.52■□□□□ 0.07
CSPG4P4Y-201ENST00000333235 PER1O15534 1290 aaPredicted RBP15.51■□□□□ 0.07
CSPG4P4Y-201ENST00000333235 TESK2Q96S53 571 aa15.51■□□□□ 0.07
CSPG4P4Y-201ENST00000333235 PLA2R1Q13018 1463 aa15.51■□□□□ 0.07
CSPG4P4Y-201ENST00000333235 PLCH2O75038 1416 aa15.51■□□□□ 0.07
CSPG4P4Y-201ENST00000333235 DISP3Q9P2K9 1392 aa15.5■□□□□ 0.07
CSPG4P4Y-201ENST00000333235 AFAP1Q8N556 730 aa15.5■□□□□ 0.07
CSPG4P4Y-201ENST00000333235 MAST1Q9Y2H9 1570 aa15.49■□□□□ 0.07
CSPG4P4Y-201ENST00000333235 KANK1Q14678 1352 aa15.49■□□□□ 0.07
CSPG4P4Y-201ENST00000333235 EXOC6Q8TAG9 804 aa15.48■□□□□ 0.07
CSPG4P4Y-201ENST00000333235 COL17A1Q9UMD9 1497 aaPredicted RBP15.48■□□□□ 0.07
CSPG4P4Y-201ENST00000333235 NOP58Q9Y2X3 529 aaKnown RBP15.48■□□□□ 0.07
CSPG4P4Y-201ENST00000333235 CHD1O14646 1710 aa15.47■□□□□ 0.07
CSPG4P4Y-201ENST00000333235 UNC13BO14795 1591 aa15.47■□□□□ 0.07
CSPG4P4Y-201ENST00000333235 STAC3Q96MF2 364 aa15.47■□□□□ 0.07
CSPG4P4Y-201ENST00000333235 TRPM1Q7Z4N2 1603 aa15.47■□□□□ 0.07
CSPG4P4Y-201ENST00000333235 MYO5CQ9NQX4 1742 aa15.47■□□□□ 0.07
CSPG4P4Y-201ENST00000333235 EIF2AK4Q9P2K8 1649 aaKnown RBP15.46■□□□□ 0.07
CSPG4P4Y-201ENST00000333235 CDCA7LQ96GN5 454 aa15.46■□□□□ 0.07
CSPG4P4Y-201ENST00000333235 KIF3BO15066 747 aa15.45■□□□□ 0.06
CSPG4P4Y-201ENST00000333235 PLXNC1O60486 1568 aa15.45■□□□□ 0.06
CSPG4P4Y-201ENST00000333235 TRAPPC8Q9Y2L5 1435 aa15.44■□□□□ 0.06
CSPG4P4Y-201ENST00000333235 ZBTB47Q9UFB7 747 aaPredicted RBP15.44■□□□□ 0.06
CSPG4P4Y-201ENST00000333235 IQGAP3Q86VI3 1631 aa15.44■□□□□ 0.06
CSPG4P4Y-201ENST00000333235 EIF3AQ14152 1382 aaKnown RBP15.43■□□□□ 0.06
CSPG4P4Y-201ENST00000333235 ATP10AO60312 1499 aa15.42■□□□□ 0.06
CSPG4P4Y-201ENST00000333235 NPM2Q86SE8 214 aaKnown RBP15.42■□□□□ 0.06
CSPG4P4Y-201ENST00000333235 ERCC6L2Q5T890 1561 aa15.42■□□□□ 0.06
CSPG4P4Y-201ENST00000333235 SLC24A1O60721 1099 aa15.42■□□□□ 0.06
CSPG4P4Y-201ENST00000333235 PRDM15P57071 1507 aaPredicted RBP15.42■□□□□ 0.06
CSPG4P4Y-201ENST00000333235 TCERG1O14776 1098 aaKnown RBP15.42■□□□□ 0.06
CSPG4P4Y-201ENST00000333235 ADAMTS8Q9UP79 889 aa15.41■□□□□ 0.06
CSPG4P4Y-201ENST00000333235 PLIN1O60240 522 aa15.4■□□□□ 0.06
CSPG4P4Y-201ENST00000333235 IPO9Q96P70 1041 aaKnown RBP15.4■□□□□ 0.06
CSPG4P4Y-201ENST00000333235 CHGAP10645 457 aaKnown RBP15.39■□□□□ 0.05
CSPG4P4Y-201ENST00000333235 SHROOM2Q13796 1616 aa15.39■□□□□ 0.05
CSPG4P4Y-201ENST00000333235 PPP2R1AP30153 589 aa15.39■□□□□ 0.05
CSPG4P4Y-201ENST00000333235 NBR1Q14596 966 aa15.39■□□□□ 0.05
CSPG4P4Y-201ENST00000333235 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.39■□□□□ 0.05
CSPG4P4Y-201ENST00000333235 E9PCH4 1651 aa15.38■□□□□ 0.05
CSPG4P4Y-201ENST00000333235 RTL5Q5HYW3 569 aaPredicted RBP15.38■□□□□ 0.05
CSPG4P4Y-201ENST00000333235 RTEL1-TNFRSF6BF6WH68 1400 aa15.37■□□□□ 0.05
CSPG4P4Y-201ENST00000333235 ABCC1P33527 1531 aa15.37■□□□□ 0.05
CSPG4P4Y-201ENST00000333235 LAMC1P11047 1609 aa15.36■□□□□ 0.05
CSPG4P4Y-201ENST00000333235 MAGI2Q86UL8 1455 aa15.36■□□□□ 0.05
CSPG4P4Y-201ENST00000333235 SCAF11Q99590 1463 aaKnown RBP15.36■□□□□ 0.05
CSPG4P4Y-201ENST00000333235 INSRP06213 1382 aa15.36■□□□□ 0.05
CSPG4P4Y-201ENST00000333235 NPM1P06748 294 aaKnown RBP eCLIP15.35■□□□□ 0.05
CSPG4P4Y-201ENST00000333235 GOLGA2Q08379 1002 aa15.35■□□□□ 0.05
CSPG4P4Y-201ENST00000333235 UHRF1BP1LA0JNW5 1464 aa15.35■□□□□ 0.05
CSPG4P4Y-201ENST00000333235 CRBNQ96SW2 442 aa15.35■□□□□ 0.05
CSPG4P4Y-201ENST00000333235 SCAPERQ9BY12 1400 aa15.35■□□□□ 0.05
CSPG4P4Y-201ENST00000333235 ZCCHC11Q5TAX3 1644 aaKnown RBP15.35■□□□□ 0.05
CSPG4P4Y-201ENST00000333235 BLMP54132 1417 aaPredicted RBP15.33■□□□□ 0.05
CSPG4P4Y-201ENST00000333235 AMER1Q5JTC6 1135 aaPredicted RBP15.33■□□□□ 0.04
CSPG4P4Y-201ENST00000333235 CFAP70Q5T0N1 1121 aa15.33■□□□□ 0.04
CSPG4P4Y-201ENST00000333235 PDE4AP27815 886 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms