RNA–Protein interactions for RNA: ENST00000333149.6

TRIM50-201, Transcript of tripartite motif containing 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM50, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-201ENST00000333149 B4GALNT3Q6L9W6 998 aa24.31■■□□□ 1.48
TRIM50-201ENST00000333149 LRPPRCP42704 1394 aaKnown RBP24.29■■□□□ 1.48
TRIM50-201ENST00000333149 CCDC141Q6ZP82 1450 aa24.28■■□□□ 1.48
TRIM50-201ENST00000333149 E9PCH4 1651 aa24.28■■□□□ 1.48
TRIM50-201ENST00000333149 HNRNPMP52272 730 aaKnown RBP eCLIP24.27■■□□□ 1.48
TRIM50-201ENST00000333149 BRD4O60885 1362 aaPredicted RBP24.27■■□□□ 1.48
TRIM50-201ENST00000333149 SAMD9LQ8IVG5 1584 aa24.27■■□□□ 1.48
TRIM50-201ENST00000333149 PREX2Q70Z35 1606 aa24.27■■□□□ 1.48
TRIM50-201ENST00000333149 CDC42BPBQ9Y5S2 1711 aa24.26■■□□□ 1.47
TRIM50-201ENST00000333149 ST20-MTHFSA0A0A6YYL1 179 aa24.26■■□□□ 1.47
TRIM50-201ENST00000333149 RALBP1Q15311 655 aa24.26■■□□□ 1.47
TRIM50-201ENST00000333149 POLR3GLQ9BT43 218 aa24.26■■□□□ 1.47
TRIM50-201ENST00000333149 FAM135AQ9P2D6 1515 aa24.26■■□□□ 1.47
TRIM50-201ENST00000333149 TMC1Q8TDI8 760 aa24.25■■□□□ 1.47
TRIM50-201ENST00000333149 RIMBP3CA6NJZ7 1639 aa24.25■■□□□ 1.47
TRIM50-201ENST00000333149 RIMBP3BA6NNM3 1639 aa24.25■■□□□ 1.47
TRIM50-201ENST00000333149 RIMBP3Q9UFD9 1639 aa24.25■■□□□ 1.47
TRIM50-201ENST00000333149 NPM1P06748 294 aaKnown RBP eCLIP24.23■■□□□ 1.47
TRIM50-201ENST00000333149 DCAF11Q8TEB1 546 aa24.23■■□□□ 1.47
TRIM50-201ENST00000333149 MAST1Q9Y2H9 1570 aa24.23■■□□□ 1.47
TRIM50-201ENST00000333149 MYBBP1AQ9BQG0 1328 aaKnown RBP24.23■■□□□ 1.47
TRIM50-201ENST00000333149 CYB5RLQ6IPT4 315 aa24.22■■□□□ 1.47
TRIM50-201ENST00000333149 TRPM1Q7Z4N2 1603 aa24.21■■□□□ 1.47
TRIM50-201ENST00000333149 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.2■■□□□ 1.47
TRIM50-201ENST00000333149 KDM2AQ9Y2K7 1162 aa24.2■■□□□ 1.47
TRIM50-201ENST00000333149 PRAG1Q86YV5 1406 aa24.2■■□□□ 1.46
TRIM50-201ENST00000333149 UNC13BO14795 1591 aa24.19■■□□□ 1.46
TRIM50-201ENST00000333149 GPRASP1Q5JY77 1395 aa24.18■■□□□ 1.46
TRIM50-201ENST00000333149 WDR7Q9Y4E6 1490 aa24.18■■□□□ 1.46
TRIM50-201ENST00000333149 TTC37Q6PGP7 1564 aa24.16■■□□□ 1.46
TRIM50-201ENST00000333149 LAMC1P11047 1609 aa24.16■■□□□ 1.46
TRIM50-201ENST00000333149 ASXL2Q76L83 1435 aa24.16■■□□□ 1.46
TRIM50-201ENST00000333149 CCDC144AA2RUR9 1427 aa24.16■■□□□ 1.46
TRIM50-201ENST00000333149 PLA2R1Q13018 1463 aa24.14■■□□□ 1.46
TRIM50-201ENST00000333149 PARD3Q8TEW0 1356 aa24.14■■□□□ 1.45
TRIM50-201ENST00000333149 CNGB1Q14028 1251 aaPredicted RBP24.13■■□□□ 1.45
TRIM50-201ENST00000333149 PLXNC1O60486 1568 aa24.11■■□□□ 1.45
TRIM50-201ENST00000333149 WASHC2CQ9Y4E1 1318 aa24.11■■□□□ 1.45
TRIM50-201ENST00000333149 ATP10AO60312 1499 aa24.1■■□□□ 1.45
TRIM50-201ENST00000333149 SYCP2Q9BX26 1530 aa24.1■■□□□ 1.45
TRIM50-201ENST00000333149 IQGAP3Q86VI3 1631 aa24.1■■□□□ 1.45
TRIM50-201ENST00000333149 PER1O15534 1290 aaPredicted RBP24.1■■□□□ 1.45
TRIM50-201ENST00000333149 NLRP13Q86W25 1043 aa24.1■■□□□ 1.45
TRIM50-201ENST00000333149 CCDC136Q96JN2 1154 aa24.09■■□□□ 1.45
TRIM50-201ENST00000333149 INSRP06213 1382 aa24.09■■□□□ 1.45
TRIM50-201ENST00000333149 A2MP01023 1474 aa24.08■■□□□ 1.45
TRIM50-201ENST00000333149 ERICH6Q7L0X2 663 aa24.08■■□□□ 1.45
TRIM50-201ENST00000333149 PLEKHH2Q8IVE3 1493 aa24.08■■□□□ 1.45
TRIM50-201ENST00000333149 MYO5CQ9NQX4 1742 aa24.08■■□□□ 1.45
TRIM50-201ENST00000333149 PRDM15P57071 1507 aaPredicted RBP24.08■■□□□ 1.45
TRIM50-201ENST00000333149 PLCH2O75038 1416 aa24.08■■□□□ 1.44
TRIM50-201ENST00000333149 ARHGAP5Q13017 1502 aa24.06■■□□□ 1.44
TRIM50-201ENST00000333149 COL17A1Q9UMD9 1497 aaPredicted RBP24.06■■□□□ 1.44
TRIM50-201ENST00000333149 PDE3BQ13370 1112 aa24.06■■□□□ 1.44
TRIM50-201ENST00000333149 ZMYM4Q5VZL5 1548 aa24.06■■□□□ 1.44
TRIM50-201ENST00000333149 MAGI2Q86UL8 1455 aa24.05■■□□□ 1.44
TRIM50-201ENST00000333149 EIF2AK4Q9P2K8 1649 aaKnown RBP24.04■■□□□ 1.44
TRIM50-201ENST00000333149 NBPF1Q3BBV0 1214 aa24.03■■□□□ 1.44
TRIM50-201ENST00000333149 TESK2Q96S53 571 aa24.03■■□□□ 1.44
TRIM50-201ENST00000333149 DUOX2Q9NRD8 1548 aa24.02■■□□□ 1.44
TRIM50-201ENST00000333149 ABCA9Q8IUA7 1624 aa24.02■■□□□ 1.44
TRIM50-201ENST00000333149 EFCAB2Q5VUJ9 269 aa24.01■■□□□ 1.43
TRIM50-201ENST00000333149 MYT1LQ9UL68 1186 aa24■■□□□ 1.43
TRIM50-201ENST00000333149 RRP1P56182 461 aaKnown RBP23.99■■□□□ 1.43
TRIM50-201ENST00000333149 ERBINQ96RT1 1412 aa23.99■■□□□ 1.43
TRIM50-201ENST00000333149 ARAP3Q8WWN8 1544 aa23.98■■□□□ 1.43
TRIM50-201ENST00000333149 RGL3Q3MIN7 710 aa23.98■■□□□ 1.43
TRIM50-201ENST00000333149 RCAN3Q9UKA8 241 aa23.96■■□□□ 1.43
TRIM50-201ENST00000333149 DISP3Q9P2K9 1392 aa23.95■■□□□ 1.43
TRIM50-201ENST00000333149 BLMP54132 1417 aaPredicted RBP23.94■■□□□ 1.42
TRIM50-201ENST00000333149 RNF17Q9BXT8 1623 aaKnown RBP23.94■■□□□ 1.42
TRIM50-201ENST00000333149 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.93■■□□□ 1.42
TRIM50-201ENST00000333149 SENP3-EIF4A1A0A087X0R7 540 aa23.92■■□□□ 1.42
TRIM50-201ENST00000333149 NOP58Q9Y2X3 529 aaKnown RBP23.92■■□□□ 1.42
TRIM50-201ENST00000333149 TMF1P82094 1093 aa23.91■■□□□ 1.42
TRIM50-201ENST00000333149 FANCAO15360 1455 aa23.89■■□□□ 1.42
TRIM50-201ENST00000333149 PANK3Q9H999 370 aa23.89■■□□□ 1.41
TRIM50-201ENST00000333149 CD109Q6YHK3 1445 aa23.89■■□□□ 1.41
TRIM50-201ENST00000333149 BCL11AQ9H165 835 aa23.88■■□□□ 1.41
TRIM50-201ENST00000333149 ABCC1P33527 1531 aa23.87■■□□□ 1.41
TRIM50-201ENST00000333149 EXOC6Q8TAG9 804 aa23.86■■□□□ 1.41
TRIM50-201ENST00000333149 IPO9Q96P70 1041 aaKnown RBP23.85■■□□□ 1.41
TRIM50-201ENST00000333149 STAC3Q96MF2 364 aa23.84■■□□□ 1.41
TRIM50-201ENST00000333149 TCERG1O14776 1098 aaKnown RBP23.84■■□□□ 1.41
TRIM50-201ENST00000333149 ANP32AP39687 249 aaKnown RBP23.84■■□□□ 1.41
TRIM50-201ENST00000333149 CC2D1BQ5T0F9 858 aaKnown RBP23.83■■□□□ 1.4
TRIM50-201ENST00000333149 TRAPPC8Q9Y2L5 1435 aa23.81■■□□□ 1.4
TRIM50-201ENST00000333149 MADDQ8WXG6 1647 aa23.81■■□□□ 1.4
TRIM50-201ENST00000333149 IQGAP1P46940 1657 aa23.81■■□□□ 1.4
TRIM50-201ENST00000333149 PAK3O75914 559 aaPredicted RBP23.81■■□□□ 1.4
TRIM50-201ENST00000333149 CDCA7LQ96GN5 454 aa23.81■■□□□ 1.4
TRIM50-201ENST00000333149 RTEL1-TNFRSF6BF6WH68 1400 aa23.8■■□□□ 1.4
TRIM50-201ENST00000333149 GLI2P10070 1586 aa23.79■■□□□ 1.4
TRIM50-201ENST00000333149 ADGRL1O94910 1474 aa23.78■■□□□ 1.4
TRIM50-201ENST00000333149 TRPM2O94759 1503 aa23.78■■□□□ 1.4
TRIM50-201ENST00000333149 SALL2Q9Y467 1007 aaPredicted RBP23.78■■□□□ 1.4
TRIM50-201ENST00000333149 PTPRTO14522 1441 aa23.78■■□□□ 1.4
TRIM50-201ENST00000333149 SCAPERQ9BY12 1400 aa23.78■■□□□ 1.4
TRIM50-201ENST00000333149 MS4A1P11836 297 aa23.77■■□□□ 1.4
TRIM50-201ENST00000333149 FAM69CQ0P6D2 419 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms