RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 CASKIN1Q8WXD9 1431 aa12.6□□□□□ -0.39
CSGALNACT1-201ENST00000332246 PANK1Q8TE04 598 aa12.6□□□□□ -0.39
CSGALNACT1-201ENST00000332246 NUTM2FA1L443 756 aa12.59□□□□□ -0.39
CSGALNACT1-201ENST00000332246 C20orf194Q5TEA3 1177 aa12.59□□□□□ -0.39
CSGALNACT1-201ENST00000332246 ITPRIPQ8IWB1 547 aa12.59□□□□□ -0.39
CSGALNACT1-201ENST00000332246 BRPF3Q9ULD4 1205 aa12.59□□□□□ -0.39
CSGALNACT1-201ENST00000332246 PTPRKQ15262 1439 aa12.59□□□□□ -0.39
CSGALNACT1-201ENST00000332246 ARID3AQ99856 593 aa12.59□□□□□ -0.39
CSGALNACT1-201ENST00000332246 MAPKBP1O60336 1514 aa12.58□□□□□ -0.4
CSGALNACT1-201ENST00000332246 TRIM44Q96DX7 344 aaPredicted RBP12.57□□□□□ -0.4
CSGALNACT1-201ENST00000332246 BCAR3O75815 825 aa12.57□□□□□ -0.4
CSGALNACT1-201ENST00000332246 MYH16Q9H6N6 1097 aa12.56□□□□□ -0.4
CSGALNACT1-201ENST00000332246 HFM1A2PYH4 1435 aa12.56□□□□□ -0.4
CSGALNACT1-201ENST00000332246 CARMIL2Q6F5E8 1435 aa12.56□□□□□ -0.4
CSGALNACT1-201ENST00000332246 HSP90AB1P08238 724 aaKnown RBP12.56□□□□□ -0.4
CSGALNACT1-201ENST00000332246 CCDC144AA2RUR9 1427 aa12.55□□□□□ -0.4
CSGALNACT1-201ENST00000332246 SMC4Q9NTJ3 1288 aa12.55□□□□□ -0.4
CSGALNACT1-201ENST00000332246 TAOK2Q9UL54 1235 aa12.55□□□□□ -0.4
CSGALNACT1-201ENST00000332246 CENPJQ9HC77 1338 aaPredicted RBP12.54□□□□□ -0.4
CSGALNACT1-201ENST00000332246 PRG4Q92954 1404 aaPredicted RBP12.54□□□□□ -0.4
CSGALNACT1-201ENST00000332246 PDE3BQ13370 1112 aa12.54□□□□□ -0.4
CSGALNACT1-201ENST00000332246 TMEM132EQ6IEE7 984 aa12.54□□□□□ -0.4
CSGALNACT1-201ENST00000332246 NFKBIBQ15653 356 aa12.54□□□□□ -0.4
CSGALNACT1-201ENST00000332246 FRAT2O75474 233 aaPredicted RBP12.54□□□□□ -0.4
CSGALNACT1-201ENST00000332246 CDK13Q14004 1512 aaKnown RBP12.53□□□□□ -0.4
CSGALNACT1-201ENST00000332246 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.53□□□□□ -0.44e-6■■■■□ 20.3
CSGALNACT1-201ENST00000332246 GSE1Q14687 1217 aa12.53□□□□□ -0.4
CSGALNACT1-201ENST00000332246 FAM161AQ3B820 660 aa12.53□□□□□ -0.4
CSGALNACT1-201ENST00000332246 AFAP1Q8N556 730 aa12.53□□□□□ -0.4
CSGALNACT1-201ENST00000332246 PLCB2Q00722 1185 aa12.52□□□□□ -0.4
CSGALNACT1-201ENST00000332246 EFCAB2Q5VUJ9 269 aa12.52□□□□□ -0.4
CSGALNACT1-201ENST00000332246 FOXD4L5Q5VV16 416 aaPredicted RBP12.52□□□□□ -0.41
CSGALNACT1-201ENST00000332246 FOXD4L4Q8WXT5 416 aaPredicted RBP12.52□□□□□ -0.41
CSGALNACT1-201ENST00000332246 PCF11O94913 1555 aaKnown RBP12.52□□□□□ -0.41
CSGALNACT1-201ENST00000332246 ANKRD50Q9ULJ7 1429 aa12.52□□□□□ -0.41
CSGALNACT1-201ENST00000332246 BIVM-ERCC5R4GMW8 1640 aa12.51□□□□□ -0.41
CSGALNACT1-201ENST00000332246 DNMBPQ6XZF7 1577 aa12.51□□□□□ -0.41
CSGALNACT1-201ENST00000332246 CFAP70Q5T0N1 1121 aa12.51□□□□□ -0.41
CSGALNACT1-201ENST00000332246 SPAG9O60271 1321 aaKnown RBP12.5□□□□□ -0.41
CSGALNACT1-201ENST00000332246 NOL8Q76FK4 1167 aaKnown RBP12.5□□□□□ -0.41
CSGALNACT1-201ENST00000332246 CENPQQ7L2Z9 268 aaPredicted RBP12.49□□□□□ -0.41
CSGALNACT1-201ENST00000332246 PRDM2Q13029 1718 aa12.49□□□□□ -0.41
CSGALNACT1-201ENST00000332246 HSCBQ8IWL3 235 aa12.49□□□□□ -0.41
CSGALNACT1-201ENST00000332246 BACH2Q9BYV9 841 aa12.49□□□□□ -0.41
CSGALNACT1-201ENST00000332246 FOXD4L6Q3SYB3 417 aaPredicted RBP12.49□□□□□ -0.41
CSGALNACT1-201ENST00000332246 FOXD4L3Q6VB84 417 aaPredicted RBP12.49□□□□□ -0.41
CSGALNACT1-201ENST00000332246 ABCA10Q8WWZ4 1543 aa12.49□□□□□ -0.41
CSGALNACT1-201ENST00000332246 FYCO1Q9BQS8 1478 aa12.48□□□□□ -0.41
CSGALNACT1-201ENST00000332246 RWDD1Q9H446 243 aaPredicted RBP12.47□□□□□ -0.41
CSGALNACT1-201ENST00000332246 PPP2R1AP30153 589 aa12.46□□□□□ -0.41
CSGALNACT1-201ENST00000332246 LMOD2Q6P5Q4 547 aa12.45□□□□□ -0.42
CSGALNACT1-201ENST00000332246 URB2Q14146 1524 aaKnown RBP12.45□□□□□ -0.42
CSGALNACT1-201ENST00000332246 SLC12A5Q9H2X9 1139 aa12.45□□□□□ -0.42
CSGALNACT1-201ENST00000332246 MINK1Q8N4C8 1332 aaPredicted RBP12.45□□□□□ -0.42
CSGALNACT1-201ENST00000332246 GRIN2BQ13224 1484 aa12.45□□□□□ -0.42
CSGALNACT1-201ENST00000332246 ANKRD30BQ9BXX2 1392 aa12.45□□□□□ -0.42
CSGALNACT1-201ENST00000332246 GGNBP2Q9H3C7 697 aa12.44□□□□□ -0.42
CSGALNACT1-201ENST00000332246 GOLGA6L22H0YM25 854 aa12.43□□□□□ -0.42
CSGALNACT1-201ENST00000332246 LNPKQ9C0E8 428 aa12.43□□□□□ -0.42
CSGALNACT1-201ENST00000332246 TSR2Q969E8 191 aaKnown RBP12.43□□□□□ -0.42
CSGALNACT1-201ENST00000332246 PTPRGP23470 1445 aa12.43□□□□□ -0.42
CSGALNACT1-201ENST00000332246 PTMAP06454 111 aaKnown RBP12.43□□□□□ -0.42
CSGALNACT1-201ENST00000332246 MTHFSP49914 203 aa12.42□□□□□ -0.42
CSGALNACT1-201ENST00000332246 SLC4A10Q6U841 1118 aa12.42□□□□□ -0.42
CSGALNACT1-201ENST00000332246 MS4A1P11836 297 aa12.42□□□□□ -0.42
CSGALNACT1-201ENST00000332246 ANKRD45Q5TZF3 282 aa12.42□□□□□ -0.42
CSGALNACT1-201ENST00000332246 DNTTIP2Q5QJE6 756 aaKnown RBP12.41□□□□□ -0.42
CSGALNACT1-201ENST00000332246 MRC2Q9UBG0 1479 aa12.41□□□□□ -0.42
CSGALNACT1-201ENST00000332246 BRD4O60885 1362 aaPredicted RBP12.41□□□□□ -0.42
CSGALNACT1-201ENST00000332246 KANK1Q14678 1352 aa12.41□□□□□ -0.42
CSGALNACT1-201ENST00000332246 E9PSI1 815 aa12.41□□□□□ -0.42
CSGALNACT1-201ENST00000332246 TCP11L2Q8N4U5 519 aa12.41□□□□□ -0.42
CSGALNACT1-201ENST00000332246 WASHC2CQ9Y4E1 1318 aa12.41□□□□□ -0.42
CSGALNACT1-201ENST00000332246 HMOX1P09601 288 aa12.41□□□□□ -0.42
CSGALNACT1-201ENST00000332246 CABP2Q9NPB3 220 aa12.41□□□□□ -0.42
CSGALNACT1-201ENST00000332246 SMG6Q86US8 1419 aaKnown RBP12.41□□□□□ -0.42
CSGALNACT1-201ENST00000332246 EFCAB5A4FU69 1503 aa12.4□□□□□ -0.42
CSGALNACT1-201ENST00000332246 DAPK1P53355 1430 aa12.4□□□□□ -0.42
CSGALNACT1-201ENST00000332246 PMFBP1Q8TBY8 1022 aa12.39□□□□□ -0.43
CSGALNACT1-201ENST00000332246 LAMC3Q9Y6N6 1575 aa12.39□□□□□ -0.43
CSGALNACT1-201ENST00000332246 GOLGA6L3A6NEY3 463 aa12.39□□□□□ -0.43
CSGALNACT1-201ENST00000332246 NECTIN2Q92692 538 aa12.39□□□□□ -0.43
CSGALNACT1-201ENST00000332246 C1orf115Q9H7X2 142 aa12.39□□□□□ -0.43
CSGALNACT1-201ENST00000332246 A0A0G2JS52 829 aa12.38□□□□□ -0.43
CSGALNACT1-201ENST00000332246 PNNQ9H307 717 aaKnown RBP12.38□□□□□ -0.43
CSGALNACT1-201ENST00000332246 KIAA1107Q9UPP5 1409 aa12.38□□□□□ -0.43
CSGALNACT1-201ENST00000332246 USP35Q9P2H5 1018 aa12.38□□□□□ -0.43
CSGALNACT1-201ENST00000332246 NCOA1Q15788 1441 aa12.38□□□□□ -0.43
CSGALNACT1-201ENST00000332246 ZNF428Q96B54 188 aa12.37□□□□□ -0.43
CSGALNACT1-201ENST00000332246 ABCC5O15440 1437 aa12.36□□□□□ -0.43
CSGALNACT1-201ENST00000332246 GLIPR1L2Q4G1C9 344 aa12.36□□□□□ -0.43
CSGALNACT1-201ENST00000332246 LTV1Q96GA3 475 aaPredicted RBP12.36□□□□□ -0.43
CSGALNACT1-201ENST00000332246 EPRSP07814 1512 aaKnown RBP12.36□□□□□ -0.43
CSGALNACT1-201ENST00000332246 ZKSCAN2Q63HK3 967 aa12.36□□□□□ -0.43
CSGALNACT1-201ENST00000332246 PDZRN3Q9UPQ7 1066 aa12.36□□□□□ -0.43
CSGALNACT1-201ENST00000332246 RIPK4P57078 832 aa12.36□□□□□ -0.43
CSGALNACT1-201ENST00000332246 SNAPC4Q5SXM2 1469 aa12.35□□□□□ -0.43
CSGALNACT1-201ENST00000332246 CGNL1Q0VF96 1302 aa12.35□□□□□ -0.43
CSGALNACT1-201ENST00000332246 IPO8O15397 1037 aaKnown RBP12.35□□□□□ -0.43
CSGALNACT1-201ENST00000332246 L1TD1Q5T7N2 865 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms