RNA–Protein interactions for RNA: ENST00000327702.11

CACNA1C-201, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-201ENST00000327702 GTF2E1P29083 439 aaPredicted RBP13.39□□□□□ -0.27
CACNA1C-201ENST00000327702 BECN2A8MW95 431 aa13.38□□□□□ -0.27
CACNA1C-201ENST00000327702 CCDC47Q96A33 483 aaKnown RBP13.38□□□□□ -0.27
CACNA1C-201ENST00000327702 DCAF8L1A6NGE4 600 aa13.38□□□□□ -0.27
CACNA1C-201ENST00000327702 U2AF1L5P0DN76 240 aaPredicted RBP13.38□□□□□ -0.27
CACNA1C-201ENST00000327702 U2AF1Q01081 240 aaKnown RBP eCLIP13.38□□□□□ -0.27
CACNA1C-201ENST00000327702 SIN3AQ96ST3 1273 aa13.38□□□□□ -0.27
CACNA1C-201ENST00000327702 AK7Q96M32 723 aa13.38□□□□□ -0.27
CACNA1C-201ENST00000327702 STK26Q9P289 416 aa13.38□□□□□ -0.27
CACNA1C-201ENST00000327702 CCER2I3L3R5 266 aa13.37□□□□□ -0.27
CACNA1C-201ENST00000327702 SMC4Q9NTJ3 1288 aa13.37□□□□□ -0.27
CACNA1C-201ENST00000327702 CDR1P51861 262 aa13.37□□□□□ -0.27
CACNA1C-201ENST00000327702 ZNF592Q92610 1267 aa13.37□□□□□ -0.27
CACNA1C-201ENST00000327702 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.37□□□□□ -0.271e-7■■■■■ 115.4
CACNA1C-201ENST00000327702 SLC4A10Q6U841 1118 aa13.37□□□□□ -0.27
CACNA1C-201ENST00000327702 IPO7O95373 1038 aaKnown RBP13.36□□□□□ -0.27
CACNA1C-201ENST00000327702 NOM1Q5C9Z4 860 aaKnown RBP13.36□□□□□ -0.27
CACNA1C-201ENST00000327702 TRIM34Q9BYJ4 488 aa13.36□□□□□ -0.27
CACNA1C-201ENST00000327702 SYNE3Q6ZMZ3 975 aa13.36□□□□□ -0.27
CACNA1C-201ENST00000327702 RUFY1Q96T51 708 aa13.36□□□□□ -0.27
CACNA1C-201ENST00000327702 ANKRD20A12PQ8NF67 263 aa13.35□□□□□ -0.27
CACNA1C-201ENST00000327702 IPO9Q96P70 1041 aaKnown RBP13.35□□□□□ -0.27
CACNA1C-201ENST00000327702 AMOTL1Q8IY63 956 aa13.35□□□□□ -0.27
CACNA1C-201ENST00000327702 ATP6V1DQ9Y5K8 247 aa13.34□□□□□ -0.27
CACNA1C-201ENST00000327702 CCNB3Q8WWL7 1395 aa13.34□□□□□ -0.27
CACNA1C-201ENST00000327702 RAD21O60216 631 aa13.34□□□□□ -0.27
CACNA1C-201ENST00000327702 CEP162Q5TB80 1403 aa13.34□□□□□ -0.27
CACNA1C-201ENST00000327702 SKOR2Q2VWA4 1001 aaPredicted RBP13.34□□□□□ -0.27
CACNA1C-201ENST00000327702 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.34□□□□□ -0.27
CACNA1C-201ENST00000327702 TRIM29Q14134 588 aa13.33□□□□□ -0.28
CACNA1C-201ENST00000327702 NOL10Q9BSC4 688 aaKnown RBP13.33□□□□□ -0.28
CACNA1C-201ENST00000327702 KLHL34Q8N239 644 aa13.33□□□□□ -0.28
CACNA1C-201ENST00000327702 HOOK1Q9UJC3 728 aaKnown RBP13.32□□□□□ -0.28
CACNA1C-201ENST00000327702 AEBP2Q6ZN18 517 aaPredicted RBP13.32□□□□□ -0.28
CACNA1C-201ENST00000327702 ACBD3Q9H3P7 528 aa13.32□□□□□ -0.28
CACNA1C-201ENST00000327702 RALBP1Q15311 655 aa13.31□□□□□ -0.28
CACNA1C-201ENST00000327702 MCTP1Q6DN14 999 aa13.31□□□□□ -0.28
CACNA1C-201ENST00000327702 VSIG10Q8N0Z9 540 aa13.31□□□□□ -0.28
CACNA1C-201ENST00000327702 LMOD3Q0VAK6 560 aa13.31□□□□□ -0.28
CACNA1C-201ENST00000327702 MAP7D2Q96T17 732 aa13.31□□□□□ -0.28
CACNA1C-201ENST00000327702 PHF23Q9BUL5 403 aaPredicted RBP13.3□□□□□ -0.28
CACNA1C-201ENST00000327702 MEX3CQ5U5Q3 659 aaKnown RBP13.3□□□□□ -0.28
CACNA1C-201ENST00000327702 HOMER1Q86YM7 354 aa13.3□□□□□ -0.28
CACNA1C-201ENST00000327702 EIF3AQ14152 1382 aaKnown RBP13.3□□□□□ -0.28
CACNA1C-201ENST00000327702 RILPL2Q969X0 211 aa13.3□□□□□ -0.28
CACNA1C-201ENST00000327702 ODF2Q5BJF6 829 aa13.29□□□□□ -0.28
CACNA1C-201ENST00000327702 DDX49Q9Y6V7 483 aaKnown RBP13.29□□□□□ -0.28
CACNA1C-201ENST00000327702 ROCK2O75116 1388 aaKnown RBP13.29□□□□□ -0.28
CACNA1C-201ENST00000327702 HSPA5P11021 654 aaKnown RBP13.29□□□□□ -0.28
CACNA1C-201ENST00000327702 NAP1L1P55209 391 aaKnown RBP13.29□□□□□ -0.28
CACNA1C-201ENST00000327702 CT47A1Q5JQC4 288 aaPredicted RBP13.28□□□□□ -0.28
CACNA1C-201ENST00000327702 LRRFIP1Q32MZ4 808 aaKnown RBP13.28□□□□□ -0.28
CACNA1C-201ENST00000327702 CCDC191Q8NCU4 936 aa13.28□□□□□ -0.28
CACNA1C-201ENST00000327702 FBXW7Q969H0 707 aa13.28□□□□□ -0.28
CACNA1C-201ENST00000327702 CCDC43Q96MW1 224 aaKnown RBP13.27□□□□□ -0.29
CACNA1C-201ENST00000327702 CENPJQ9HC77 1338 aaPredicted RBP13.27□□□□□ -0.29
CACNA1C-201ENST00000327702 DCTN1Q14203 1278 aa13.27□□□□□ -0.29
CACNA1C-201ENST00000327702 ARGLU1Q9NWB6 273 aaPredicted RBP13.26□□□□□ -0.29
CACNA1C-201ENST00000327702 CPLX2Q6PUV4 134 aaKnown RBP13.26□□□□□ -0.29
CACNA1C-201ENST00000327702 HSP90AB2PQ58FF8 381 aa13.26□□□□□ -0.29
CACNA1C-201ENST00000327702 FOXD4L6Q3SYB3 417 aaPredicted RBP13.25□□□□□ -0.29
CACNA1C-201ENST00000327702 FOXD4L3Q6VB84 417 aaPredicted RBP13.25□□□□□ -0.29
CACNA1C-201ENST00000327702 TNIKQ9UKE5 1360 aa13.24□□□□□ -0.29
CACNA1C-201ENST00000327702 DHX16O60231 1041 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-201ENST00000327702 RDXP35241 583 aaKnown RBP13.23□□□□□ -0.29
CACNA1C-201ENST00000327702 AMPHP49418 695 aa13.23□□□□□ -0.29
CACNA1C-201ENST00000327702 MYO6Q9UM54 1294 aa13.23□□□□□ -0.29
CACNA1C-201ENST00000327702 ANO2Q9NQ90 1003 aa13.23□□□□□ -0.29
CACNA1C-201ENST00000327702 EIF4G1Q04637 1599 aaKnown RBP13.23□□□□□ -0.29
CACNA1C-201ENST00000327702 CCDC173Q0VFZ6 552 aa13.23□□□□□ -0.29
CACNA1C-201ENST00000327702 MNS1Q8NEH6 495 aa13.23□□□□□ -0.29
CACNA1C-201ENST00000327702 CCDC146Q8IYE0 955 aa13.22□□□□□ -0.29
CACNA1C-201ENST00000327702 CLUAP1Q96AJ1 413 aa13.22□□□□□ -0.29
CACNA1C-201ENST00000327702 TERF2IPQ9NYB0 399 aa13.22□□□□□ -0.29
CACNA1C-201ENST00000327702 RUFY2Q8WXA3 655 aa13.22□□□□□ -0.29
CACNA1C-201ENST00000327702 DIAPH3Q9NSV4 1193 aa13.22□□□□□ -0.29
CACNA1C-201ENST00000327702 HSP90B2PQ58FF3 399 aa13.22□□□□□ -0.29
CACNA1C-201ENST00000327702 EPS15P42566 896 aa13.21□□□□□ -0.29
CACNA1C-201ENST00000327702 CWC15Q9P013 229 aaKnown RBP13.21□□□□□ -0.29
CACNA1C-201ENST00000327702 EVA1CP58658 441 aa13.21□□□□□ -0.29
CACNA1C-201ENST00000327702 BICD2Q8TD16 824 aa13.21□□□□□ -0.3
CACNA1C-201ENST00000327702 WDR70Q9NW82 654 aa13.21□□□□□ -0.3
CACNA1C-201ENST00000327702 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.21□□□□□ -0.3
CACNA1C-201ENST00000327702 SASS6Q6UVJ0 657 aa13.2□□□□□ -0.3
CACNA1C-201ENST00000327702 GGT6Q6P531 493 aa13.2□□□□□ -0.3
CACNA1C-201ENST00000327702 KIF27Q86VH2 1401 aa13.2□□□□□ -0.3
CACNA1C-201ENST00000327702 ERICH2A1L162 156 aa13.2□□□□□ -0.3
CACNA1C-201ENST00000327702 ZFYVE27Q5T4F4 411 aa13.2□□□□□ -0.3
CACNA1C-201ENST00000327702 ANKRD45Q5TZF3 282 aa13.2□□□□□ -0.3
CACNA1C-201ENST00000327702 SAMD1Q6SPF0 538 aaPredicted RBP13.2□□□□□ -0.3
CACNA1C-201ENST00000327702 CAGE1Q8TC20 777 aa13.2□□□□□ -0.3
CACNA1C-201ENST00000327702 CPLX1O14810 134 aa13.2□□□□□ -0.3
CACNA1C-201ENST00000327702 NFXL1Q6ZNB6 911 aa13.2□□□□□ -0.3
CACNA1C-201ENST00000327702 TIMELESSQ9UNS1 1208 aa13.2□□□□□ -0.3
CACNA1C-201ENST00000327702 FAM13BQ9NYF5 915 aa13.19□□□□□ -0.3
CACNA1C-201ENST00000327702 R3HCC1Q9Y3T6 440 aaKnown RBP13.19□□□□□ -0.3
CACNA1C-201ENST00000327702 CEP164Q9UPV0 1460 aa13.19□□□□□ -0.3
CACNA1C-201ENST00000327702 H0YHG0 523 aa13.19□□□□□ -0.3
CACNA1C-201ENST00000327702 ERCC4Q92889 916 aaPredicted RBP13.19□□□□□ -0.3
CACNA1C-201ENST00000327702 ERCC6Q03468 1493 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms