RNA–Protein interactions for RNA: ENST00000324767.11

SCAPER-202, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAPER, Length 4,707 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-202ENST00000324767 TRAK1Q9UPV9 953 aa10.04□□□□□ -0.8
SCAPER-202ENST00000324767 CCDC141Q6ZP82 1450 aa10.04□□□□□ -0.8
SCAPER-202ENST00000324767 SUPT16HQ9Y5B9 1047 aaKnown RBP10.04□□□□□ -0.8
SCAPER-202ENST00000324767 IPO8O15397 1037 aaKnown RBP10.04□□□□□ -0.8
SCAPER-202ENST00000324767 SLC52A1Q9NWF4 448 aa10.04□□□□□ -0.8
SCAPER-202ENST00000324767 CGNL1Q0VF96 1302 aa10.03□□□□□ -0.8
SCAPER-202ENST00000324767 MYBBP1AQ9BQG0 1328 aaKnown RBP10.03□□□□□ -0.8
SCAPER-202ENST00000324767 NGDNQ8NEJ9 315 aaKnown RBP10.03□□□□□ -0.8
SCAPER-202ENST00000324767 LAS1LQ9Y4W2 734 aaKnown RBP10.03□□□□□ -0.8
SCAPER-202ENST00000324767 POGZQ7Z3K3 1410 aa10.03□□□□□ -0.8
SCAPER-202ENST00000324767 PLEKHG5O94827 1062 aa10.03□□□□□ -0.8
SCAPER-202ENST00000324767 SCAPERQ9BY12 1400 aa10.03□□□□□ -0.8
SCAPER-202ENST00000324767 U2AF1L5P0DN76 240 aaPredicted RBP10.02□□□□□ -0.8
SCAPER-202ENST00000324767 U2AF1Q01081 240 aaKnown RBP eCLIP10.02□□□□□ -0.8
SCAPER-202ENST00000324767 CASC1Q6TDU7 716 aa10.02□□□□□ -0.8
SCAPER-202ENST00000324767 DDRGK1Q96HY6 314 aa10.02□□□□□ -0.8
SCAPER-202ENST00000324767 WDR97A6NE52 1622 aa10.02□□□□□ -0.8
SCAPER-202ENST00000324767 CFAP44Q96MT7 982 aa10.02□□□□□ -0.81
SCAPER-202ENST00000324767 CDK13Q14004 1512 aaKnown RBP10.02□□□□□ -0.81
SCAPER-202ENST00000324767 CENPJQ9HC77 1338 aaPredicted RBP10.01□□□□□ -0.81
SCAPER-202ENST00000324767 BECN1Q14457 450 aa10.01□□□□□ -0.81
SCAPER-202ENST00000324767 RPGRIP1LQ68CZ1 1315 aa10.01□□□□□ -0.81
SCAPER-202ENST00000324767 PLB1Q6P1J6 1458 aa10□□□□□ -0.81
SCAPER-202ENST00000324767 PAK3O75914 559 aaPredicted RBP10□□□□□ -0.81
SCAPER-202ENST00000324767 HDAC5Q9UQL6 1122 aa9.99□□□□□ -0.81
SCAPER-202ENST00000324767 CD109Q6YHK3 1445 aa9.99□□□□□ -0.81
SCAPER-202ENST00000324767 IRX6P78412 446 aaPredicted RBP9.99□□□□□ -0.81
SCAPER-202ENST00000324767 ANP32BQ92688 251 aaKnown RBP9.98□□□□□ -0.81
SCAPER-202ENST00000324767 FRAT1Q92837 279 aaPredicted RBP9.98□□□□□ -0.81
SCAPER-202ENST00000324767 PANK3Q9H999 370 aa9.98□□□□□ -0.81
SCAPER-202ENST00000324767 ANKRD30BQ9BXX2 1392 aa9.98□□□□□ -0.81
SCAPER-202ENST00000324767 WDR62O43379 1518 aa9.98□□□□□ -0.81
SCAPER-202ENST00000324767 UGGT2Q9NYU1 1516 aa9.98□□□□□ -0.81
SCAPER-202ENST00000324767 CAMSAP2Q08AD1 1489 aa9.97□□□□□ -0.81
SCAPER-202ENST00000324767 AKNAQ7Z591 1439 aa9.97□□□□□ -0.81
SCAPER-202ENST00000324767 PPP6R1Q9UPN7 881 aa9.97□□□□□ -0.81
SCAPER-202ENST00000324767 ADAMTS12P58397 1594 aa9.97□□□□□ -0.81
SCAPER-202ENST00000324767 NAIPQ13075 1403 aa9.97□□□□□ -0.81
SCAPER-202ENST00000324767 COG3Q96JB2 828 aa9.97□□□□□ -0.81
SCAPER-202ENST00000324767 ARHGEF11O15085 1522 aa9.97□□□□□ -0.81
SCAPER-202ENST00000324767 WASHC2AQ641Q2 1341 aa9.97□□□□□ -0.81
SCAPER-202ENST00000324767 GOLGA2Q08379 1002 aa9.97□□□□□ -0.81
SCAPER-202ENST00000324767 NUTM2DQ5VT03 806 aaPredicted RBP9.97□□□□□ -0.81
SCAPER-202ENST00000324767 PRKRIP1Q9H875 184 aaPredicted RBP9.97□□□□□ -0.81
SCAPER-202ENST00000324767 PTPN23Q9H3S7 1636 aa9.97□□□□□ -0.81
SCAPER-202ENST00000324767 SOX12O15370 315 aa9.96□□□□□ -0.82
SCAPER-202ENST00000324767 CSB-PGBD3P0DP91 1061 aa9.96□□□□□ -0.82
SCAPER-202ENST00000324767 AMPHP49418 695 aa9.96□□□□□ -0.82
SCAPER-202ENST00000324767 CCDC7Q96M83 1385 aa9.95□□□□□ -0.82
SCAPER-202ENST00000324767 THEMISQ8N1K5 641 aaPredicted RBP9.95□□□□□ -0.82
SCAPER-202ENST00000324767 CTTNBP2Q8WZ74 1663 aa9.95□□□□□ -0.82
SCAPER-202ENST00000324767 RCAN3Q9UKA8 241 aa9.95□□□□□ -0.82
SCAPER-202ENST00000324767 ADGRL1O94910 1474 aa9.95□□□□□ -0.82
SCAPER-202ENST00000324767 RAPGEF6Q8TEU7 1601 aa9.94□□□□□ -0.82
SCAPER-202ENST00000324767 ANP32EQ9BTT0 268 aa9.94□□□□□ -0.82
SCAPER-202ENST00000324767 ABCC5O15440 1437 aa9.93□□□□□ -0.82
SCAPER-202ENST00000324767 ARXQ96QS3 562 aa9.93□□□□□ -0.82
SCAPER-202ENST00000324767 MINK1Q8N4C8 1332 aaPredicted RBP9.93□□□□□ -0.82
SCAPER-202ENST00000324767 STK31Q9BXU1 1019 aa9.93□□□□□ -0.82
SCAPER-202ENST00000324767 CNTLNQ9NXG0 1405 aa9.92□□□□□ -0.82
SCAPER-202ENST00000324767 NCOA1Q15788 1441 aa9.91□□□□□ -0.82
SCAPER-202ENST00000324767 DENND4BO75064 1496 aaPredicted RBP9.91□□□□□ -0.82
SCAPER-202ENST00000324767 KIF21AQ7Z4S6 1674 aa9.91□□□□□ -0.82
SCAPER-202ENST00000324767 KIF7Q2M1P5 1343 aa9.91□□□□□ -0.82
SCAPER-202ENST00000324767 OS9Q13438 667 aaPredicted RBP9.91□□□□□ -0.82
SCAPER-202ENST00000324767 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.91□□□□□ -0.821e-6■■■■□ 22.6
SCAPER-202ENST00000324767 NUP160Q12769 1436 aa9.9□□□□□ -0.82
SCAPER-202ENST00000324767 ITSN2Q9NZM3 1697 aa9.9□□□□□ -0.82
SCAPER-202ENST00000324767 FANCAO15360 1455 aa9.9□□□□□ -0.82
SCAPER-202ENST00000324767 RAPGEF3O95398 923 aa9.9□□□□□ -0.83
SCAPER-202ENST00000324767 RWDD1Q9H446 243 aaPredicted RBP9.9□□□□□ -0.83
SCAPER-202ENST00000324767 KIAA0556O60303 1618 aa9.89□□□□□ -0.83
SCAPER-202ENST00000324767 EIF4G3O43432 1585 aaKnown RBP9.89□□□□□ -0.83
SCAPER-202ENST00000324767 ZBED9Q6R2W3 1325 aa9.89□□□□□ -0.83
SCAPER-202ENST00000324767 TEX14Q8IWB6 1497 aa9.89□□□□□ -0.83
SCAPER-202ENST00000324767 GOLGA6L22H0YM25 854 aa9.89□□□□□ -0.83
SCAPER-202ENST00000324767 E9PSI1 815 aa9.89□□□□□ -0.83
SCAPER-202ENST00000324767 TXNDC2Q86VQ3 553 aa9.89□□□□□ -0.83
SCAPER-202ENST00000324767 PLCH2O75038 1416 aa9.88□□□□□ -0.83
SCAPER-202ENST00000324767 NPHP1O15259 732 aa9.88□□□□□ -0.83
SCAPER-202ENST00000324767 PMFBP1Q8TBY8 1022 aa9.88□□□□□ -0.83
SCAPER-202ENST00000324767 GPATCH8Q9UKJ3 1502 aaKnown RBP9.88□□□□□ -0.83
SCAPER-202ENST00000324767 ATP10BO94823 1461 aa9.88□□□□□ -0.83
SCAPER-202ENST00000324767 DIAPH1O60610 1272 aaKnown RBP9.88□□□□□ -0.83
SCAPER-202ENST00000324767 BRD4O60885 1362 aaPredicted RBP9.88□□□□□ -0.83
SCAPER-202ENST00000324767 HMMRO75330 724 aa9.87□□□□□ -0.83
SCAPER-202ENST00000324767 NUP153P49790 1475 aaKnown RBP9.87□□□□□ -0.83
SCAPER-202ENST00000324767 CFAP70Q5T0N1 1121 aa9.87□□□□□ -0.83
SCAPER-202ENST00000324767 ATF3P18847 181 aa9.87□□□□□ -0.83
SCAPER-202ENST00000324767 ERBINQ96RT1 1412 aa9.87□□□□□ -0.83
SCAPER-202ENST00000324767 ABCA5Q8WWZ7 1642 aa9.86□□□□□ -0.83
SCAPER-202ENST00000324767 DHX29Q7Z478 1369 aaKnown RBP9.86□□□□□ -0.83
SCAPER-202ENST00000324767 NCLP19338 710 aaKnown RBP9.86□□□□□ -0.83
SCAPER-202ENST00000324767 SENP3-EIF4A1A0A087X0R7 540 aa9.86□□□□□ -0.83
SCAPER-202ENST00000324767 PSME1Q06323 249 aa9.86□□□□□ -0.83
SCAPER-202ENST00000324767 SMC4Q9NTJ3 1288 aa9.86□□□□□ -0.83
SCAPER-202ENST00000324767 ZNF692Q9BU19 519 aaPredicted RBP9.86□□□□□ -0.83
SCAPER-202ENST00000324767 ATAD2Q6PL18 1390 aa9.85□□□□□ -0.83
SCAPER-202ENST00000324767 WDR7Q9Y4E6 1490 aa9.85□□□□□ -0.83
SCAPER-202ENST00000324767 RGS3P49796 1198 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms