RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 U2AF1Q01081 240 aaKnown RBP eCLIP15.6■□□□□ 0.092e-9■■□□□ 12.6
FN1-201ENST00000323926 CPLX2Q6PUV4 134 aaKnown RBP15.6■□□□□ 0.09
FN1-201ENST00000323926 MPHOSPH9Q99550 1183 aa15.59■□□□□ 0.09
FN1-201ENST00000323926 RRBP1Q9P2E9 1410 aaKnown RBP15.59■□□□□ 0.09
FN1-201ENST00000323926 HSP90B1P14625 803 aaKnown RBP15.59■□□□□ 0.09
FN1-201ENST00000323926 EVC2Q86UK5 1308 aa15.59■□□□□ 0.09
FN1-201ENST00000323926 ITPRIPQ8IWB1 547 aa15.59■□□□□ 0.09
FN1-201ENST00000323926 CECR2Q9BXF3 1484 aa15.58■□□□□ 0.09
FN1-201ENST00000323926 RUFY2Q8WXA3 655 aa15.58■□□□□ 0.08
FN1-201ENST00000323926 SMC4Q9NTJ3 1288 aa15.58■□□□□ 0.08
FN1-201ENST00000323926 CENPJQ9HC77 1338 aaPredicted RBP15.58■□□□□ 0.08
FN1-201ENST00000323926 HIRIP3Q9BW71 556 aaPredicted RBP15.57■□□□□ 0.08
FN1-201ENST00000323926 MYOM3Q5VTT5 1437 aa15.57■□□□□ 0.08
FN1-201ENST00000323926 SETQ01105 290 aaPredicted RBP15.57■□□□□ 0.08
FN1-201ENST00000323926 ANKRD20A12PQ8NF67 263 aa15.56■□□□□ 0.08
FN1-201ENST00000323926 REC8O95072 547 aa15.56■□□□□ 0.08
FN1-201ENST00000323926 VGFO15240 615 aaPredicted RBP15.56■□□□□ 0.08
FN1-201ENST00000323926 G3V3G9 751 aa15.56■□□□□ 0.08
FN1-201ENST00000323926 DCAF8Q5TAQ9 597 aa15.56■□□□□ 0.08
FN1-201ENST00000323926 ISY1Q9ULR0 285 aaKnown RBP15.55■□□□□ 0.08
FN1-201ENST00000323926 PLEKHH2Q8IVE3 1493 aa15.55■□□□□ 0.08
FN1-201ENST00000323926 CFAP65Q6ZU64 1925 aaKnown RBP15.55■□□□□ 0.08
FN1-201ENST00000323926 TULP1O00294 542 aaPredicted RBP15.55■□□□□ 0.08
FN1-201ENST00000323926 CENPQQ7L2Z9 268 aaPredicted RBP15.55■□□□□ 0.08
FN1-201ENST00000323926 MYBBP1AQ9BQG0 1328 aaKnown RBP15.55■□□□□ 0.08
FN1-201ENST00000323926 A0A0U1RQG5 324 aaPredicted RBP15.54■□□□□ 0.08
FN1-201ENST00000323926 CSB-PGBD3P0DP91 1061 aa15.54■□□□□ 0.08
FN1-201ENST00000323926 WASHC2CQ9Y4E1 1318 aa15.54■□□□□ 0.08
FN1-201ENST00000323926 NEXNQ0ZGT2 675 aa15.54■□□□□ 0.08
FN1-201ENST00000323926 DHX8Q14562 1220 aaKnown RBP15.54■□□□□ 0.08
FN1-201ENST00000323926 NOL10Q9BSC4 688 aaKnown RBP15.53■□□□□ 0.08
FN1-201ENST00000323926 FANCD2Q9BXW9 1451 aa15.53■□□□□ 0.08
FN1-201ENST00000323926 FYCO1Q9BQS8 1478 aa15.53■□□□□ 0.08
FN1-201ENST00000323926 AKAP17AQ02040 695 aaKnown RBP15.53■□□□□ 0.08
FN1-201ENST00000323926 ITSN2Q9NZM3 1697 aa15.53■□□□□ 0.08
FN1-201ENST00000323926 PAK3O75914 559 aaPredicted RBP15.52■□□□□ 0.08
FN1-201ENST00000323926 CCDC47Q96A33 483 aaKnown RBP15.52■□□□□ 0.08
FN1-201ENST00000323926 GOLGA6L3A6NEY3 463 aa15.52■□□□□ 0.07
FN1-201ENST00000323926 TRIM6-TRIM34B2RNG4 842 aa15.52■□□□□ 0.07
FN1-201ENST00000323926 TRHP20396 242 aaPredicted RBP15.52■□□□□ 0.07
FN1-201ENST00000323926 RASSF8Q8NHQ8 419 aa15.52■□□□□ 0.07
FN1-201ENST00000323926 E9PSI1 815 aa15.52■□□□□ 0.07
FN1-201ENST00000323926 IPO7O95373 1038 aaKnown RBP15.51■□□□□ 0.07
FN1-201ENST00000323926 GAPVD1Q14C86 1478 aa15.51■□□□□ 0.07
FN1-201ENST00000323926 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.51■□□□□ 0.07
FN1-201ENST00000323926 GOLGA6L19H0YKK7 550 aa15.5■□□□□ 0.07
FN1-201ENST00000323926 AMPHP49418 695 aa15.5■□□□□ 0.07
FN1-201ENST00000323926 RNF20Q5VTR2 975 aa15.5■□□□□ 0.07
FN1-201ENST00000323926 SYNE3Q6ZMZ3 975 aa15.5■□□□□ 0.07
FN1-201ENST00000323926 GGT6Q6P531 493 aa15.49■□□□□ 0.07
FN1-201ENST00000323926 EHBP1L1Q8N3D4 1523 aa15.49■□□□□ 0.07
FN1-201ENST00000323926 C1orf141Q5JVX7 400 aa15.49■□□□□ 0.07
FN1-201ENST00000323926 KIF21AQ7Z4S6 1674 aa15.49■□□□□ 0.07
FN1-201ENST00000323926 HSPA5P11021 654 aaKnown RBP15.49■□□□□ 0.07
FN1-201ENST00000323926 ZBED9Q6R2W3 1325 aa15.49■□□□□ 0.07
FN1-201ENST00000323926 NGDNQ8NEJ9 315 aaKnown RBP15.49■□□□□ 0.07
FN1-201ENST00000323926 DDX58O95786 925 aaKnown RBP15.48■□□□□ 0.07
FN1-201ENST00000323926 RDXP35241 583 aaKnown RBP15.48■□□□□ 0.07
FN1-201ENST00000323926 TCEAL9Q9UHQ7 104 aa15.48■□□□□ 0.07
FN1-201ENST00000323926 SF3A1Q15459 793 aaKnown RBP15.47■□□□□ 0.07
FN1-201ENST00000323926 B4GALNT3Q6L9W6 998 aa15.47■□□□□ 0.07
FN1-201ENST00000323926 ATAD2BQ9ULI0 1458 aa15.47■□□□□ 0.07
FN1-201ENST00000323926 PLEKHG5O94827 1062 aa15.47■□□□□ 0.07
FN1-201ENST00000323926 H3BQV1 296 aa15.47■□□□□ 0.07
FN1-201ENST00000323926 HSP90AB4PQ58FF6 505 aa15.47■□□□□ 0.07
FN1-201ENST00000323926 IFFO2Q5TF58 517 aa15.47■□□□□ 0.07
FN1-201ENST00000323926 ZKSCAN1P17029 563 aaPredicted RBP15.46■□□□□ 0.07
FN1-201ENST00000323926 TPD52L1Q16890 204 aaPredicted RBP15.46■□□□□ 0.07
FN1-201ENST00000323926 UNC13AQ9UPW8 1703 aa15.46■□□□□ 0.07
FN1-201ENST00000323926 IPO9Q96P70 1041 aaKnown RBP15.45■□□□□ 0.06
FN1-201ENST00000323926 PDIA4P13667 645 aaKnown RBP15.45■□□□□ 0.06
FN1-201ENST00000323926 TNNT3P45378 269 aaPredicted RBP15.45■□□□□ 0.06
FN1-201ENST00000323926 SIN3AQ96ST3 1273 aa15.45■□□□□ 0.06
FN1-201ENST00000323926 CC2D2AQ9P2K1 1620 aa15.45■□□□□ 0.06
FN1-201ENST00000323926 CCDC7Q96M83 1385 aa15.45■□□□□ 0.06
FN1-201ENST00000323926 CHMP3Q9Y3E7 222 aa15.45■□□□□ 0.06
FN1-201ENST00000323926 CTTNBP2Q8WZ74 1663 aa15.45■□□□□ 0.06
FN1-201ENST00000323926 CDR1P51861 262 aa15.44■□□□□ 0.06
FN1-201ENST00000323926 COG3Q96JB2 828 aa15.44■□□□□ 0.06
FN1-201ENST00000323926 DDX19BQ9UMR2 479 aa15.44■□□□□ 0.06
FN1-201ENST00000323926 MFAP1P55081 439 aaKnown RBP15.44■□□□□ 0.06
FN1-201ENST00000323926 TRIM29Q14134 588 aa15.44■□□□□ 0.06
FN1-201ENST00000323926 CNTLNQ9NXG0 1405 aa15.44■□□□□ 0.06
FN1-201ENST00000323926 GTF2E1P29083 439 aaPredicted RBP15.43■□□□□ 0.06
FN1-201ENST00000323926 NINLQ9Y2I6 1382 aa15.43■□□□□ 0.06
FN1-201ENST00000323926 FAM184AQ8NB25 1140 aa15.43■□□□□ 0.06
FN1-201ENST00000323926 MYO6Q9UM54 1294 aa15.42■□□□□ 0.06
FN1-201ENST00000323926 TRIM34Q9BYJ4 488 aa15.42■□□□□ 0.06
FN1-201ENST00000323926 KIF3BO15066 747 aa15.42■□□□□ 0.06
FN1-201ENST00000323926 MARCH6O60337 910 aa15.42■□□□□ 0.06
FN1-201ENST00000323926 FRAT2O75474 233 aaPredicted RBP15.42■□□□□ 0.06
FN1-201ENST00000323926 STK26Q9P289 416 aa15.42■□□□□ 0.06
FN1-201ENST00000323926 TOP2BQ02880 1626 aa15.42■□□□□ 0.06
FN1-201ENST00000323926 KIF7Q2M1P5 1343 aa15.42■□□□□ 0.06
FN1-201ENST00000323926 MTERF4Q7Z6M4 381 aaKnown RBP15.41■□□□□ 0.06
FN1-201ENST00000323926 USP47Q96K76 1375 aa15.41■□□□□ 0.06
FN1-201ENST00000323926 HMGXB3Q12766 1538 aa15.4■□□□□ 0.06
FN1-201ENST00000323926 SYNJ2O15056 1496 aa15.4■□□□□ 0.06
FN1-201ENST00000323926 NAT10Q9H0A0 1025 aaKnown RBP15.4■□□□□ 0.06
FN1-201ENST00000323926 TRDNQ13061 729 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms