RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 ZNF608Q9ULD9 1512 aaPredicted RBP10.25□□□□□ -0.77
CD46-201ENST00000322875 CRBNQ96SW2 442 aa10.25□□□□□ -0.77
CD46-201ENST00000322875 RRAGDQ9NQL2 400 aaPredicted RBP10.25□□□□□ -0.77
CD46-201ENST00000322875 PLEKHH2Q8IVE3 1493 aa10.25□□□□□ -0.77
CD46-201ENST00000322875 FAM161AQ3B820 660 aa10.24□□□□□ -0.77
CD46-201ENST00000322875 KIAA1107Q9UPP5 1409 aa10.24□□□□□ -0.77
CD46-201ENST00000322875 ADGBQ8N7X0 1667 aa10.24□□□□□ -0.77
CD46-201ENST00000322875 CDCA7LQ96GN5 454 aa10.23□□□□□ -0.77
CD46-201ENST00000322875 CENPQQ7L2Z9 268 aaPredicted RBP10.23□□□□□ -0.77
CD46-201ENST00000322875 PLIN1O60240 522 aa10.22□□□□□ -0.77
CD46-201ENST00000322875 MAGI1Q96QZ7 1491 aaPredicted RBP10.22□□□□□ -0.77
CD46-201ENST00000322875 USP19O94966 1318 aa10.21□□□□□ -0.77
CD46-201ENST00000322875 NLRP13Q86W25 1043 aa10.21□□□□□ -0.77
CD46-201ENST00000322875 SLC4A1APQ9BWU0 796 aaKnown RBP10.21□□□□□ -0.78
CD46-201ENST00000322875 CDK13Q14004 1512 aaKnown RBP10.21□□□□□ -0.78
CD46-201ENST00000322875 CROCC2H7BZ55 1655 aa10.21□□□□□ -0.78
CD46-201ENST00000322875 ADGRL2O95490 1459 aa10.2□□□□□ -0.78
CD46-201ENST00000322875 CEP170Q5SW79 1584 aa10.2□□□□□ -0.78
CD46-201ENST00000322875 NLRP1Q9C000 1473 aa10.2□□□□□ -0.78
CD46-201ENST00000322875 C20orf194Q5TEA3 1177 aa10.2□□□□□ -0.78
CD46-201ENST00000322875 CHD1O14646 1710 aa10.19□□□□□ -0.78
CD46-201ENST00000322875 PER1O15534 1290 aaPredicted RBP10.19□□□□□ -0.78
CD46-201ENST00000322875 POGKQ9P215 609 aa10.18□□□□□ -0.78
CD46-201ENST00000322875 KIAA0586Q9BVV6 1533 aa10.18□□□□□ -0.78
CD46-201ENST00000322875 CLASP1Q7Z460 1538 aa10.17□□□□□ -0.78
CD46-201ENST00000322875 DAXXQ9UER7 740 aaPredicted RBP10.17□□□□□ -0.78
CD46-201ENST00000322875 CNGB1Q14028 1251 aaPredicted RBP10.17□□□□□ -0.78
CD46-201ENST00000322875 TRPM1Q7Z4N2 1603 aa10.17□□□□□ -0.78
CD46-201ENST00000322875 KDM5DQ9BY66 1539 aa10.17□□□□□ -0.78
CD46-201ENST00000322875 FSD2A1L4K1 749 aa10.17□□□□□ -0.78
CD46-201ENST00000322875 GLIPR1L2Q4G1C9 344 aa10.17□□□□□ -0.78
CD46-201ENST00000322875 ZMYND15Q9H091 742 aa10.17□□□□□ -0.78
CD46-201ENST00000322875 ANTXR1Q9H6X2 564 aa10.17□□□□□ -0.78
CD46-201ENST00000322875 CLCN1P35523 988 aa10.16□□□□□ -0.78
CD46-201ENST00000322875 LAMC1P11047 1609 aa10.16□□□□□ -0.78
CD46-201ENST00000322875 PBRM1Q86U86 1689 aa10.16□□□□□ -0.78
CD46-201ENST00000322875 L1TD1Q5T7N2 865 aaKnown RBP10.16□□□□□ -0.78
CD46-201ENST00000322875 RIMBP3CA6NJZ7 1639 aa10.16□□□□□ -0.78
CD46-201ENST00000322875 RIMBP3BA6NNM3 1639 aa10.16□□□□□ -0.78
CD46-201ENST00000322875 RIMBP3Q9UFD9 1639 aa10.16□□□□□ -0.78
CD46-201ENST00000322875 RRP9O43818 475 aaKnown RBP10.15□□□□□ -0.78
CD46-201ENST00000322875 ZNF521Q96K83 1311 aa10.15□□□□□ -0.78
CD46-201ENST00000322875 ST20-MTHFSA0A0A6YYL1 179 aa10.15□□□□□ -0.79
CD46-201ENST00000322875 POLR3GLQ9BT43 218 aa10.14□□□□□ -0.79
CD46-201ENST00000322875 SYNJ2O15056 1496 aa10.14□□□□□ -0.79
CD46-201ENST00000322875 EIF3AQ14152 1382 aaKnown RBP10.13□□□□□ -0.79
CD46-201ENST00000322875 DUSP27Q5VZP5 1158 aa10.13□□□□□ -0.79
CD46-201ENST00000322875 CARD11Q9BXL7 1154 aa10.13□□□□□ -0.79
CD46-201ENST00000322875 COL17A1Q9UMD9 1497 aaPredicted RBP10.13□□□□□ -0.79
CD46-201ENST00000322875 IQGAP2Q13576 1575 aa10.13□□□□□ -0.79
CD46-201ENST00000322875 XRCC6P12956 609 aaKnown RBP eCLIP10.12□□□□□ -0.79
CD46-201ENST00000322875 CAMSAP2Q08AD1 1489 aa10.12□□□□□ -0.79
CD46-201ENST00000322875 ZNF644Q9H582 1327 aaPredicted RBP10.12□□□□□ -0.79
CD46-201ENST00000322875 ITSN2Q9NZM3 1697 aa10.11□□□□□ -0.79
CD46-201ENST00000322875 PLEKHH1Q9ULM0 1364 aa10.11□□□□□ -0.79
CD46-201ENST00000322875 TRMT2AQ8IZ69 625 aaKnown RBP10.11□□□□□ -0.79
CD46-201ENST00000322875 ADCY10Q96PN6 1610 aa10.1□□□□□ -0.79
CD46-201ENST00000322875 GPRASP1Q5JY77 1395 aa10.1□□□□□ -0.79
CD46-201ENST00000322875 TDRD9Q8NDG6 1382 aaKnown RBP10.1□□□□□ -0.79
CD46-201ENST00000322875 PRDM15P57071 1507 aaPredicted RBP10.1□□□□□ -0.79
CD46-201ENST00000322875 PKD2Q13563 968 aa10.1□□□□□ -0.79
CD46-201ENST00000322875 PTPRGP23470 1445 aa10.1□□□□□ -0.79
CD46-201ENST00000322875 VSIG10Q8N0Z9 540 aa10.1□□□□□ -0.79
CD46-201ENST00000322875 ZMYM3Q14202 1370 aa10.09□□□□□ -0.79
CD46-201ENST00000322875 ABCC10Q5T3U5 1492 aa10.09□□□□□ -0.79
CD46-201ENST00000322875 HSP90AA2PQ14568 343 aaPredicted RBP10.09□□□□□ -0.79
CD46-201ENST00000322875 ZNF326Q5BKZ1 582 aaKnown RBP10.09□□□□□ -0.79
CD46-201ENST00000322875 PRAG1Q86YV5 1406 aa10.08□□□□□ -0.8
CD46-201ENST00000322875 SEC24BO95487 1268 aa10.08□□□□□ -0.8
CD46-201ENST00000322875 NUP153P49790 1475 aaKnown RBP10.08□□□□□ -0.8
CD46-201ENST00000322875 CCDC144AA2RUR9 1427 aa10.08□□□□□ -0.8
CD46-201ENST00000322875 PNNQ9H307 717 aaKnown RBP10.08□□□□□ -0.8
CD46-201ENST00000322875 CENPJQ9HC77 1338 aaPredicted RBP10.07□□□□□ -0.8
CD46-201ENST00000322875 HSP90AA1P07900 732 aaKnown RBP10.07□□□□□ -0.8
CD46-201ENST00000322875 CHMP7Q8WUX9 453 aaPredicted RBP10.07□□□□□ -0.8
CD46-201ENST00000322875 PLXNC1O60486 1568 aa10.07□□□□□ -0.8
CD46-201ENST00000322875 CDC42BPAQ5VT25 1732 aa10.06□□□□□ -0.8
CD46-201ENST00000322875 SHANK2Q9UPX8 1470 aa10.06□□□□□ -0.8
CD46-201ENST00000322875 ABCC2Q92887 1545 aa10.06□□□□□ -0.8
CD46-201ENST00000322875 ANKRD50Q9ULJ7 1429 aa10.06□□□□□ -0.8
CD46-201ENST00000322875 IGHDP01880 384 aa10.06□□□□□ -0.8
CD46-201ENST00000322875 BECN1Q14457 450 aa10.06□□□□□ -0.8
CD46-201ENST00000322875 PANK2Q9BZ23 570 aa10.06□□□□□ -0.8
CD46-201ENST00000322875 GPATCH8Q9UKJ3 1502 aaKnown RBP10.05□□□□□ -0.8
CD46-201ENST00000322875 ADAMTS12P58397 1594 aa10.05□□□□□ -0.8
CD46-201ENST00000322875 RAPGEF6Q8TEU7 1601 aa10.05□□□□□ -0.8
CD46-201ENST00000322875 GOLGA6L3A6NEY3 463 aa10.05□□□□□ -0.8
CD46-201ENST00000322875 RGS3P49796 1198 aa10.05□□□□□ -0.8
CD46-201ENST00000322875 SLFN5Q08AF3 891 aa10.05□□□□□ -0.8
CD46-201ENST00000322875 TESK2Q96S53 571 aa10.05□□□□□ -0.8
CD46-201ENST00000322875 ADAMTS8Q9UP79 889 aa10.05□□□□□ -0.8
CD46-201ENST00000322875 DISP3Q9P2K9 1392 aa10.05□□□□□ -0.8
CD46-201ENST00000322875 NAP1L5Q96NT1 182 aaPredicted RBP10.05□□□□□ -0.8
CD46-201ENST00000322875 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.04□□□□□ -0.8
CD46-201ENST00000322875 KIAA0556O60303 1618 aa10.04□□□□□ -0.8
CD46-201ENST00000322875 MAPK8IP3Q9UPT6 1336 aa10.04□□□□□ -0.8
CD46-201ENST00000322875 TBC1D32Q96NH3 1257 aa10.04□□□□□ -0.8
CD46-201ENST00000322875 ANKRD30AQ9BXX3 1397 aa10.04□□□□□ -0.8
CD46-201ENST00000322875 RTEL1-TNFRSF6BF6WH68 1400 aa10.04□□□□□ -0.8
CD46-201ENST00000322875 NKTRP30414 1462 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms