RNA–Protein interactions for RNA: ENST00000319167.12

TRO-202, Transcript of trophinin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRO, Length 2,326 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-202ENST00000319167 NBPF1Q3BBV0 1214 aa17.67■□□□□ 0.42
TRO-202ENST00000319167 NUDCQ9Y266 331 aa17.67■□□□□ 0.42
TRO-202ENST00000319167 CCDC144AA2RUR9 1427 aa17.67■□□□□ 0.42
TRO-202ENST00000319167 MSH5O43196 834 aa17.66■□□□□ 0.42
TRO-202ENST00000319167 SMG6Q86US8 1419 aaKnown RBP17.66■□□□□ 0.42
TRO-202ENST00000319167 ARHGAP5Q13017 1502 aa17.66■□□□□ 0.42
TRO-202ENST00000319167 CDC42BPBQ9Y5S2 1711 aa17.65■□□□□ 0.42
TRO-202ENST00000319167 SYCP2Q9BX26 1530 aa17.65■□□□□ 0.42
TRO-202ENST00000319167 SALL2Q9Y467 1007 aaPredicted RBP17.63■□□□□ 0.41
TRO-202ENST00000319167 MYBBP1AQ9BQG0 1328 aaKnown RBP17.63■□□□□ 0.41
TRO-202ENST00000319167 PREX2Q70Z35 1606 aa17.62■□□□□ 0.41
TRO-202ENST00000319167 RALBP1Q15311 655 aa17.61■□□□□ 0.41
TRO-202ENST00000319167 PRAG1Q86YV5 1406 aa17.61■□□□□ 0.41
TRO-202ENST00000319167 TTC37Q6PGP7 1564 aa17.6■□□□□ 0.41
TRO-202ENST00000319167 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.6■□□□□ 0.41
TRO-202ENST00000319167 PLEKHH2Q8IVE3 1493 aa17.6■□□□□ 0.41
TRO-202ENST00000319167 FANCIQ9NVI1 1328 aa17.59■□□□□ 0.41
TRO-202ENST00000319167 PLA2R1Q13018 1463 aa17.59■□□□□ 0.41
TRO-202ENST00000319167 BRD4O60885 1362 aaPredicted RBP17.57■□□□□ 0.4
TRO-202ENST00000319167 ERCC6L2Q5T890 1561 aa17.57■□□□□ 0.4
TRO-202ENST00000319167 CCDC136Q96JN2 1154 aa17.56■□□□□ 0.4
TRO-202ENST00000319167 CC2D1BQ5T0F9 858 aaKnown RBP17.56■□□□□ 0.4
TRO-202ENST00000319167 CHD1O14646 1710 aa17.56■□□□□ 0.4
TRO-202ENST00000319167 A2MP01023 1474 aa17.55■□□□□ 0.4
TRO-202ENST00000319167 LRPPRCP42704 1394 aaKnown RBP17.54■□□□□ 0.4
TRO-202ENST00000319167 KTN1Q86UP2 1357 aaKnown RBP17.54■□□□□ 0.4
TRO-202ENST00000319167 RNF123Q5XPI4 1314 aa17.54■□□□□ 0.4
TRO-202ENST00000319167 ERICH6Q7L0X2 663 aa17.53■□□□□ 0.4
TRO-202ENST00000319167 PER1O15534 1290 aaPredicted RBP17.53■□□□□ 0.4
TRO-202ENST00000319167 NLRP13Q86W25 1043 aa17.53■□□□□ 0.4
TRO-202ENST00000319167 TRPM1Q7Z4N2 1603 aa17.52■□□□□ 0.4
TRO-202ENST00000319167 DISP3Q9P2K9 1392 aa17.52■□□□□ 0.39
TRO-202ENST00000319167 EFCAB2Q5VUJ9 269 aa17.52■□□□□ 0.39
TRO-202ENST00000319167 TESK2Q96S53 571 aa17.52■□□□□ 0.39
TRO-202ENST00000319167 PANK3Q9H999 370 aa17.52■□□□□ 0.39
TRO-202ENST00000319167 ABCC2Q92887 1545 aa17.51■□□□□ 0.39
TRO-202ENST00000319167 UNC13BO14795 1591 aa17.5■□□□□ 0.39
TRO-202ENST00000319167 MAST1Q9Y2H9 1570 aa17.5■□□□□ 0.39
TRO-202ENST00000319167 PARD3Q8TEW0 1356 aa17.49■□□□□ 0.39
TRO-202ENST00000319167 GPRASP1Q5JY77 1395 aa17.48■□□□□ 0.39
TRO-202ENST00000319167 TMF1P82094 1093 aa17.48■□□□□ 0.39
TRO-202ENST00000319167 SHROOM2Q13796 1616 aa17.47■□□□□ 0.39
TRO-202ENST00000319167 DUOX2Q9NRD8 1548 aa17.47■□□□□ 0.39
TRO-202ENST00000319167 PLCH2O75038 1416 aa17.47■□□□□ 0.39
TRO-202ENST00000319167 AFAP1Q8N556 730 aa17.47■□□□□ 0.39
TRO-202ENST00000319167 MYO5CQ9NQX4 1742 aa17.47■□□□□ 0.39
TRO-202ENST00000319167 E9PCH4 1651 aa17.47■□□□□ 0.39
TRO-202ENST00000319167 ERBINQ96RT1 1412 aa17.46■□□□□ 0.39
TRO-202ENST00000319167 TRAPPC8Q9Y2L5 1435 aa17.46■□□□□ 0.39
TRO-202ENST00000319167 IQGAP3Q86VI3 1631 aa17.45■□□□□ 0.38
TRO-202ENST00000319167 PLXNC1O60486 1568 aa17.45■□□□□ 0.38
TRO-202ENST00000319167 CDCA7LQ96GN5 454 aa17.45■□□□□ 0.38
TRO-202ENST00000319167 COL17A1Q9UMD9 1497 aaPredicted RBP17.44■□□□□ 0.38
TRO-202ENST00000319167 RCAN3Q9UKA8 241 aa17.44■□□□□ 0.38
TRO-202ENST00000319167 RRP1P56182 461 aaKnown RBP17.44■□□□□ 0.38
TRO-202ENST00000319167 SPAG9O60271 1321 aaKnown RBP17.44■□□□□ 0.38
TRO-202ENST00000319167 MYT1LQ9UL68 1186 aa17.43■□□□□ 0.38
TRO-202ENST00000319167 PRDM15P57071 1507 aaPredicted RBP17.43■□□□□ 0.38
TRO-202ENST00000319167 EXOC6Q8TAG9 804 aa17.42■□□□□ 0.38
TRO-202ENST00000319167 WASHC2CQ9Y4E1 1318 aa17.4■□□□□ 0.38
TRO-202ENST00000319167 ATP10AO60312 1499 aa17.39■□□□□ 0.37
TRO-202ENST00000319167 ZCCHC11Q5TAX3 1644 aaKnown RBP17.39■□□□□ 0.37
TRO-202ENST00000319167 PDE3BQ13370 1112 aa17.38■□□□□ 0.37
TRO-202ENST00000319167 MAGI2Q86UL8 1455 aa17.38■□□□□ 0.37
TRO-202ENST00000319167 EIF2AK4Q9P2K8 1649 aaKnown RBP17.37■□□□□ 0.37
TRO-202ENST00000319167 ABCC1P33527 1531 aa17.37■□□□□ 0.37
TRO-202ENST00000319167 PLIN1O60240 522 aa17.36■□□□□ 0.37
TRO-202ENST00000319167 KNSTRNQ9Y448 316 aa17.36■□□□□ 0.37
TRO-202ENST00000319167 LAMC1P11047 1609 aa17.35■□□□□ 0.37
TRO-202ENST00000319167 ADAMTS8Q9UP79 889 aa17.35■□□□□ 0.37
TRO-202ENST00000319167 KIF3BO15066 747 aa17.33■□□□□ 0.37
TRO-202ENST00000319167 UHRF1BP1LA0JNW5 1464 aa17.32■□□□□ 0.36
TRO-202ENST00000319167 PPP2R1AP30153 589 aa17.31■□□□□ 0.36
TRO-202ENST00000319167 NOP58Q9Y2X3 529 aaKnown RBP17.31■□□□□ 0.36
TRO-202ENST00000319167 PAK3O75914 559 aaPredicted RBP17.3■□□□□ 0.36
TRO-202ENST00000319167 WDR43Q15061 677 aaKnown RBP eCLIP17.3■□□□□ 0.36
TRO-202ENST00000319167 WDR7Q9Y4E6 1490 aa17.29■□□□□ 0.36
TRO-202ENST00000319167 BLMP54132 1417 aaPredicted RBP17.29■□□□□ 0.36
TRO-202ENST00000319167 ANP32AP39687 249 aaKnown RBP17.29■□□□□ 0.36
TRO-202ENST00000319167 RTEL1-TNFRSF6BF6WH68 1400 aa17.29■□□□□ 0.36
TRO-202ENST00000319167 CLASP1Q7Z460 1538 aa17.28■□□□□ 0.36
TRO-202ENST00000319167 CDCA8Q53HL2 280 aa17.28■□□□□ 0.36
TRO-202ENST00000319167 AMER1Q5JTC6 1135 aaPredicted RBP17.28■□□□□ 0.36
TRO-202ENST00000319167 KANK1Q14678 1352 aa17.27■□□□□ 0.36
TRO-202ENST00000319167 SCAPERQ9BY12 1400 aa17.27■□□□□ 0.36
TRO-202ENST00000319167 ZFYVE16Q7Z3T8 1539 aa17.27■□□□□ 0.36
TRO-202ENST00000319167 MADDQ8WXG6 1647 aa17.27■□□□□ 0.36
TRO-202ENST00000319167 SCAF11Q99590 1463 aaKnown RBP17.26■□□□□ 0.35
TRO-202ENST00000319167 CFAP70Q5T0N1 1121 aa17.26■□□□□ 0.35
TRO-202ENST00000319167 RNF17Q9BXT8 1623 aaKnown RBP17.26■□□□□ 0.35
TRO-202ENST00000319167 TRPM2O94759 1503 aa17.26■□□□□ 0.35
TRO-202ENST00000319167 CRBNQ96SW2 442 aa17.26■□□□□ 0.35
TRO-202ENST00000319167 FANCAO15360 1455 aa17.25■□□□□ 0.35
TRO-202ENST00000319167 NPM2Q86SE8 214 aaKnown RBP17.25■□□□□ 0.35
TRO-202ENST00000319167 PTPRTO14522 1441 aa17.25■□□□□ 0.35
TRO-202ENST00000319167 NBR1Q14596 966 aa17.24■□□□□ 0.35
TRO-202ENST00000319167 CLTCL1P53675 1640 aa17.24■□□□□ 0.35
TRO-202ENST00000319167 IPO9Q96P70 1041 aaKnown RBP17.24■□□□□ 0.35
TRO-202ENST00000319167 STAC3Q96MF2 364 aa17.23■□□□□ 0.35
TRO-202ENST00000319167 C20orf194Q5TEA3 1177 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms