RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 TIGD1Q96MW7 591 aa11.74□□□□□ -0.53
BDNF-201ENST00000314915 KIF3AQ9Y496 699 aa11.74□□□□□ -0.53
BDNF-201ENST00000314915 P3H3Q8IVL6 736 aa11.74□□□□□ -0.53
BDNF-201ENST00000314915 BANK1Q8NDB2 785 aa11.74□□□□□ -0.53
BDNF-201ENST00000314915 IGSF3O75054 1194 aa11.73□□□□□ -0.53
BDNF-201ENST00000314915 CCDC173Q0VFZ6 552 aa11.73□□□□□ -0.53
BDNF-201ENST00000314915 TMEM132AQ24JP5 1023 aa11.73□□□□□ -0.53
BDNF-201ENST00000314915 TNIKQ9UKE5 1360 aa11.73□□□□□ -0.53
BDNF-201ENST00000314915 CBX1P83916 185 aa11.73□□□□□ -0.53
BDNF-201ENST00000314915 SASS6Q6UVJ0 657 aa11.72□□□□□ -0.53
BDNF-201ENST00000314915 NUDCQ9Y266 331 aa11.72□□□□□ -0.53
BDNF-201ENST00000314915 OS9Q13438 667 aaPredicted RBP11.72□□□□□ -0.53
BDNF-201ENST00000314915 RB1CC1Q8TDY2 1594 aa11.71□□□□□ -0.53
BDNF-201ENST00000314915 HS1BP3Q53T59 392 aa11.71□□□□□ -0.53
BDNF-201ENST00000314915 PUS7Q96PZ0 661 aaKnown RBP11.71□□□□□ -0.53
BDNF-201ENST00000314915 TRIM6-TRIM34B2RNG4 842 aa11.7□□□□□ -0.54
BDNF-201ENST00000314915 TRIM34Q9BYJ4 488 aa11.7□□□□□ -0.54
BDNF-201ENST00000314915 CALCOCO1Q9P1Z2 691 aa11.69□□□□□ -0.54
BDNF-201ENST00000314915 ZNF500O60304 480 aaPredicted RBP11.69□□□□□ -0.54
BDNF-201ENST00000314915 NPM1P06748 294 aaKnown RBP eCLIP11.68□□□□□ -0.54
BDNF-201ENST00000314915 MYCBPQ99417 103 aaPredicted RBP11.68□□□□□ -0.54
BDNF-201ENST00000314915 NINLQ9Y2I6 1382 aa11.68□□□□□ -0.54
BDNF-201ENST00000314915 CFAP44Q96MT7 982 aa11.68□□□□□ -0.54
BDNF-201ENST00000314915 TNNT3P45378 269 aaPredicted RBP11.68□□□□□ -0.54
BDNF-201ENST00000314915 AKNAQ7Z591 1439 aa11.67□□□□□ -0.54
BDNF-201ENST00000314915 SATB1Q01826 763 aa11.67□□□□□ -0.54
BDNF-201ENST00000314915 GABPB1Q06547 395 aaPredicted RBP11.67□□□□□ -0.54
BDNF-201ENST00000314915 CTR9Q6PD62 1173 aa11.67□□□□□ -0.54
BDNF-201ENST00000314915 TULP2O00295 520 aa11.67□□□□□ -0.54
BDNF-201ENST00000314915 PPP1R9BQ96SB3 815 aa11.67□□□□□ -0.54
BDNF-201ENST00000314915 FAM161AQ3B820 660 aa11.66□□□□□ -0.54
BDNF-201ENST00000314915 CEP83Q9Y592 693 aa11.66□□□□□ -0.54
BDNF-201ENST00000314915 LOC102724159A0A0B4J2E5 919 aa11.65□□□□□ -0.54
BDNF-201ENST00000314915 PWP2Q15269 919 aaKnown RBP11.65□□□□□ -0.54
BDNF-201ENST00000314915 SMARCA2P51531 1590 aa11.65□□□□□ -0.54
BDNF-201ENST00000314915 MCM5P33992 734 aa11.65□□□□□ -0.54
BDNF-201ENST00000314915 CHMP4CQ96CF2 233 aa11.65□□□□□ -0.54
BDNF-201ENST00000314915 GZF1Q9H116 711 aaPredicted RBP11.65□□□□□ -0.54
BDNF-201ENST00000314915 NBPF11Q86T75 865 aa11.64□□□□□ -0.55
BDNF-201ENST00000314915 TRAK2O60296 914 aa11.64□□□□□ -0.55
BDNF-201ENST00000314915 MCM4P33991 863 aa11.64□□□□□ -0.55
BDNF-201ENST00000314915 MFAP1P55081 439 aaKnown RBP11.64□□□□□ -0.55
BDNF-201ENST00000314915 GPATCH11Q8N954 259 aa11.64□□□□□ -0.55
BDNF-201ENST00000314915 TTC36A6NLP5 189 aa11.63□□□□□ -0.55
BDNF-201ENST00000314915 RAI14Q9P0K7 980 aa11.63□□□□□ -0.55
BDNF-201ENST00000314915 GOLIM4O00461 696 aa11.62□□□□□ -0.55
BDNF-201ENST00000314915 HMGN5P82970 282 aaKnown RBP11.62□□□□□ -0.55
BDNF-201ENST00000314915 NCAPGQ9BPX3 1015 aa11.62□□□□□ -0.55
BDNF-201ENST00000314915 HIRIP3Q9BW71 556 aaPredicted RBP11.62□□□□□ -0.55
BDNF-201ENST00000314915 SMC4Q9NTJ3 1288 aa11.62□□□□□ -0.55
BDNF-201ENST00000314915 SH3BP1Q9Y3L3 701 aa11.62□□□□□ -0.55
BDNF-201ENST00000314915 FEZ1Q99689 392 aa11.62□□□□□ -0.55
BDNF-201ENST00000314915 MAP2K1Q02750 393 aaPredicted RBP11.62□□□□□ -0.55
BDNF-201ENST00000314915 RBM28Q9NW13 759 aaKnown RBP11.62□□□□□ -0.55
BDNF-201ENST00000314915 DDX11L8A8MPP1 907 aa11.61□□□□□ -0.55
BDNF-201ENST00000314915 CCDC172P0C7W6 258 aa11.61□□□□□ -0.55
BDNF-201ENST00000314915 KCNA4P22459 653 aa11.61□□□□□ -0.55
BDNF-201ENST00000314915 GTF2A1P52655 376 aaPredicted RBP11.61□□□□□ -0.55
BDNF-201ENST00000314915 ANAPC15P60006 121 aa11.61□□□□□ -0.55
BDNF-201ENST00000314915 FAM9BQ8IZU0 186 aa11.61□□□□□ -0.55
BDNF-201ENST00000314915 SSR1P43307 286 aaKnown RBP11.61□□□□□ -0.55
BDNF-201ENST00000314915 WDR97A6NE52 1622 aa11.61□□□□□ -0.55
BDNF-201ENST00000314915 PRR29P0C7W0 189 aa11.61□□□□□ -0.55
BDNF-201ENST00000314915 UPF2Q9HAU5 1272 aaKnown RBP11.61□□□□□ -0.55
BDNF-201ENST00000314915 NOL7Q9UMY1 257 aaKnown RBP11.61□□□□□ -0.55
BDNF-201ENST00000314915 BRPF1P55201 1214 aaPredicted RBP11.6□□□□□ -0.55
BDNF-201ENST00000314915 MYRIPQ8NFW9 859 aa11.6□□□□□ -0.55
BDNF-201ENST00000314915 NBPF9Q3BBW0 867 aa11.59□□□□□ -0.55
BDNF-201ENST00000314915 PRIMPOLQ96LW4 560 aa11.59□□□□□ -0.55
BDNF-201ENST00000314915 ATP2B3Q16720 1220 aa11.59□□□□□ -0.55
BDNF-201ENST00000314915 BRMS1Q9HCU9 246 aa11.59□□□□□ -0.55
BDNF-201ENST00000314915 CUX2O14529 1486 aa11.58□□□□□ -0.55
BDNF-201ENST00000314915 PABPN1Q86U42 306 aaKnown RBP eCLIP11.58□□□□□ -0.56
BDNF-201ENST00000314915 MRS2Q9HD23 443 aa11.58□□□□□ -0.56
BDNF-201ENST00000314915 CAPN2P17655 700 aa11.58□□□□□ -0.56
BDNF-201ENST00000314915 SEMA3FQ13275 785 aa11.57□□□□□ -0.56
BDNF-201ENST00000314915 CALRP27797 417 aaKnown RBP11.57□□□□□ -0.56
BDNF-201ENST00000314915 CREBRFQ8IUR6 639 aa11.57□□□□□ -0.56
BDNF-201ENST00000314915 ZBTB9Q96C00 473 aa11.57□□□□□ -0.56
BDNF-201ENST00000314915 SLKQ9H2G2 1235 aaPredicted RBP11.56□□□□□ -0.56
BDNF-201ENST00000314915 EXOC6Q8TAG9 804 aa11.56□□□□□ -0.56
BDNF-201ENST00000314915 OGFRQ9NZT2 677 aa11.56□□□□□ -0.56
BDNF-201ENST00000314915 SKOR2Q2VWA4 1001 aaPredicted RBP11.56□□□□□ -0.56
BDNF-201ENST00000314915 PDCL2Q8N4E4 241 aa11.56□□□□□ -0.56
BDNF-201ENST00000314915 IRF6O14896 467 aa11.56□□□□□ -0.56
BDNF-201ENST00000314915 RRP1P56182 461 aaKnown RBP11.56□□□□□ -0.56
BDNF-201ENST00000314915 ANTXR1Q9H6X2 564 aa11.56□□□□□ -0.56
BDNF-201ENST00000314915 KIF1CO43896 1103 aaKnown RBP11.55□□□□□ -0.56
BDNF-201ENST00000314915 GTF2F1P35269 517 aaKnown RBP eCLIP11.55□□□□□ -0.56
BDNF-201ENST00000314915 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.55□□□□□ -0.56
BDNF-201ENST00000314915 TRHP20396 242 aaPredicted RBP11.55□□□□□ -0.56
BDNF-201ENST00000314915 RBM25P49756 843 aaKnown RBP11.55□□□□□ -0.56
BDNF-201ENST00000314915 CLIP1P30622 1438 aa11.55□□□□□ -0.56
BDNF-201ENST00000314915 NASPP49321 788 aaPredicted RBP11.55□□□□□ -0.56
BDNF-201ENST00000314915 MNS1Q8NEH6 495 aa11.55□□□□□ -0.56
BDNF-201ENST00000314915 PRDM16Q9HAZ2 1276 aa11.55□□□□□ -0.56
BDNF-201ENST00000314915 TERF2IPQ9NYB0 399 aa11.55□□□□□ -0.56
BDNF-201ENST00000314915 GOLGA3Q08378 1498 aa11.55□□□□□ -0.56
BDNF-201ENST00000314915 CT47A1Q5JQC4 288 aaPredicted RBP11.54□□□□□ -0.56
BDNF-201ENST00000314915 KTN1Q86UP2 1357 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms