RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 FAM135AQ9P2D6 1515 aa34.33■■■■□ 3.09
HOXB3-201ENST00000311626 ARHGEF12Q9NZN5 1544 aa34.32■■■■□ 3.09
HOXB3-201ENST00000311626 SALL2Q9Y467 1007 aaPredicted RBP34.32■■■■□ 3.08
HOXB3-201ENST00000311626 SMG6Q86US8 1419 aaKnown RBP34.31■■■■□ 3.08
HOXB3-201ENST00000311626 ARHGEF5Q12774 1597 aa34.31■■■■□ 3.08
HOXB3-201ENST00000311626 SYCP2Q9BX26 1530 aa34.29■■■■□ 3.08
HOXB3-201ENST00000311626 CCDC144AA2RUR9 1427 aa34.26■■■■□ 3.07
HOXB3-201ENST00000311626 ARHGAP5Q13017 1502 aa34.25■■■■□ 3.07
HOXB3-201ENST00000311626 PREX2Q70Z35 1606 aa34.23■■■■□ 3.07
HOXB3-201ENST00000311626 TTC37Q6PGP7 1564 aa34.22■■■■□ 3.07
HOXB3-201ENST00000311626 MYBBP1AQ9BQG0 1328 aaKnown RBP34.2■■■■□ 3.07
HOXB3-201ENST00000311626 PLA2R1Q13018 1463 aa34.2■■■■□ 3.07
HOXB3-201ENST00000311626 RSPH4AQ5TD94 716 aa34.19■■■■□ 3.06
HOXB3-201ENST00000311626 FANCIQ9NVI1 1328 aa34.19■■■■□ 3.06
HOXB3-201ENST00000311626 PRAG1Q86YV5 1406 aa34.19■■■■□ 3.06
HOXB3-201ENST00000311626 ERCC6L2Q5T890 1561 aa34.19■■■■□ 3.06
HOXB3-201ENST00000311626 PLEKHH2Q8IVE3 1493 aa34.18■■■■□ 3.06
HOXB3-201ENST00000311626 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.16■■■■□ 3.06
HOXB3-201ENST00000311626 CHD1O14646 1710 aa34.16■■■■□ 3.06
HOXB3-201ENST00000311626 RALBP1Q15311 655 aa34.14■■■■□ 3.06
HOXB3-201ENST00000311626 CC2D1BQ5T0F9 858 aaKnown RBP34.13■■■■□ 3.05
HOXB3-201ENST00000311626 CCDC136Q96JN2 1154 aa34.13■■■■□ 3.05
HOXB3-201ENST00000311626 A2MP01023 1474 aa34.11■■■■□ 3.05
HOXB3-201ENST00000311626 BRD4O60885 1362 aaPredicted RBP34.1■■■■□ 3.05
HOXB3-201ENST00000311626 LRPPRCP42704 1394 aaKnown RBP34.09■■■■□ 3.05
HOXB3-201ENST00000311626 RNF123Q5XPI4 1314 aa34.09■■■■□ 3.05
HOXB3-201ENST00000311626 TRPM1Q7Z4N2 1603 aa34.08■■■■□ 3.05
HOXB3-201ENST00000311626 DISP3Q9P2K9 1392 aa34.07■■■■□ 3.04
HOXB3-201ENST00000311626 ERICH6Q7L0X2 663 aa34.05■■■■□ 3.04
HOXB3-201ENST00000311626 PER1O15534 1290 aaPredicted RBP34.05■■■■□ 3.04
HOXB3-201ENST00000311626 KTN1Q86UP2 1357 aaKnown RBP34.04■■■■□ 3.04
HOXB3-201ENST00000311626 TESK2Q96S53 571 aa34.03■■■■□ 3.04
HOXB3-201ENST00000311626 E9PCH4 1651 aa34.02■■■■□ 3.04
HOXB3-201ENST00000311626 PANK3Q9H999 370 aa34.02■■■■□ 3.04
HOXB3-201ENST00000311626 NLRP13Q86W25 1043 aa34.01■■■■□ 3.04
HOXB3-201ENST00000311626 UNC13BO14795 1591 aa33.99■■■■□ 3.03
HOXB3-201ENST00000311626 PARD3Q8TEW0 1356 aa33.98■■■■□ 3.03
HOXB3-201ENST00000311626 CDCA7LQ96GN5 454 aa33.97■■■■□ 3.03
HOXB3-201ENST00000311626 ABCC2Q92887 1545 aa33.95■■■■□ 3.03
HOXB3-201ENST00000311626 MAST1Q9Y2H9 1570 aa33.94■■■■□ 3.02
HOXB3-201ENST00000311626 MYO5CQ9NQX4 1742 aa33.94■■■■□ 3.02
HOXB3-201ENST00000311626 GPRASP1Q5JY77 1395 aa33.93■■■■□ 3.02
HOXB3-201ENST00000311626 EXOC6Q8TAG9 804 aa33.92■■■■□ 3.02
HOXB3-201ENST00000311626 EFCAB2Q5VUJ9 269 aa33.92■■■■□ 3.02
HOXB3-201ENST00000311626 TRAPPC8Q9Y2L5 1435 aa33.92■■■■□ 3.02
HOXB3-201ENST00000311626 AFAP1Q8N556 730 aa33.91■■■■□ 3.02
HOXB3-201ENST00000311626 ERBINQ96RT1 1412 aa33.91■■■■□ 3.02
HOXB3-201ENST00000311626 COL17A1Q9UMD9 1497 aaPredicted RBP33.9■■■■□ 3.02
HOXB3-201ENST00000311626 SHROOM2Q13796 1616 aa33.9■■■■□ 3.02
HOXB3-201ENST00000311626 IQGAP3Q86VI3 1631 aa33.9■■■■□ 3.02
HOXB3-201ENST00000311626 RRP1P56182 461 aaKnown RBP33.9■■■■□ 3.02
HOXB3-201ENST00000311626 RCAN3Q9UKA8 241 aa33.89■■■■□ 3.02
HOXB3-201ENST00000311626 TMF1P82094 1093 aa33.88■■■■□ 3.01
HOXB3-201ENST00000311626 DUOX2Q9NRD8 1548 aa33.88■■■■□ 3.01
HOXB3-201ENST00000311626 PLXNC1O60486 1568 aa33.86■■■■□ 3.01
HOXB3-201ENST00000311626 PRDM15P57071 1507 aaPredicted RBP33.86■■■■□ 3.01
HOXB3-201ENST00000311626 PLCH2O75038 1416 aa33.85■■■■□ 3.01
HOXB3-201ENST00000311626 PLIN1O60240 522 aa33.82■■■■□ 3
HOXB3-201ENST00000311626 SPAG9O60271 1321 aaKnown RBP33.8■■■■□ 3
HOXB3-201ENST00000311626 ZCCHC11Q5TAX3 1644 aaKnown RBP33.77■■■■□ 3
HOXB3-201ENST00000311626 MYT1LQ9UL68 1186 aa33.77■■■■□ 3
HOXB3-201ENST00000311626 PAK3O75914 559 aaPredicted RBP33.76■■■■□ 3
HOXB3-201ENST00000311626 MAGI2Q86UL8 1455 aa33.74■■■□□ 2.99
HOXB3-201ENST00000311626 ATP10AO60312 1499 aa33.72■■■□□ 2.99
HOXB3-201ENST00000311626 ADAMTS8Q9UP79 889 aa33.71■■■□□ 2.99
HOXB3-201ENST00000311626 ABCC1P33527 1531 aa33.71■■■□□ 2.99
HOXB3-201ENST00000311626 EIF2AK4Q9P2K8 1649 aaKnown RBP33.7■■■□□ 2.99
HOXB3-201ENST00000311626 LAMC1P11047 1609 aa33.69■■■□□ 2.98
HOXB3-201ENST00000311626 PDE3BQ13370 1112 aa33.69■■■□□ 2.98
HOXB3-201ENST00000311626 WASHC2CQ9Y4E1 1318 aa33.68■■■□□ 2.98
HOXB3-201ENST00000311626 NOP58Q9Y2X3 529 aaKnown RBP33.66■■■□□ 2.98
HOXB3-201ENST00000311626 KNSTRNQ9Y448 316 aa33.66■■■□□ 2.98
HOXB3-201ENST00000311626 SKAP1Q86WV1 359 aa33.65■■■□□ 2.98
HOXB3-201ENST00000311626 KIF3BO15066 747 aa33.62■■■□□ 2.97
HOXB3-201ENST00000311626 PPP2R1AP30153 589 aa33.62■■■□□ 2.97
HOXB3-201ENST00000311626 WDR7Q9Y4E6 1490 aa33.61■■■□□ 2.97
HOXB3-201ENST00000311626 BLMP54132 1417 aaPredicted RBP33.61■■■□□ 2.97
HOXB3-201ENST00000311626 NBR1Q14596 966 aa33.6■■■□□ 2.97
HOXB3-201ENST00000311626 NPM2Q86SE8 214 aaKnown RBP33.59■■■□□ 2.97
HOXB3-201ENST00000311626 CRBNQ96SW2 442 aa33.58■■■□□ 2.97
HOXB3-201ENST00000311626 MADDQ8WXG6 1647 aa33.58■■■□□ 2.97
HOXB3-201ENST00000311626 RNF17Q9BXT8 1623 aaKnown RBP33.58■■■□□ 2.97
HOXB3-201ENST00000311626 ANP32AP39687 249 aaKnown RBP33.57■■■□□ 2.96
HOXB3-201ENST00000311626 AMER1Q5JTC6 1135 aaPredicted RBP33.57■■■□□ 2.96
HOXB3-201ENST00000311626 C20orf194Q5TEA3 1177 aa33.56■■■□□ 2.96
HOXB3-201ENST00000311626 CLTCL1P53675 1640 aa33.54■■■□□ 2.96
HOXB3-201ENST00000311626 WDR43Q15061 677 aaKnown RBP eCLIP33.54■■■□□ 2.96
HOXB3-201ENST00000311626 CFAP70Q5T0N1 1121 aa33.53■■■□□ 2.96
HOXB3-201ENST00000311626 ZFYVE16Q7Z3T8 1539 aa33.53■■■□□ 2.96
HOXB3-201ENST00000311626 UHRF1BP1LA0JNW5 1464 aa33.53■■■□□ 2.96
HOXB3-201ENST00000311626 CLASP1Q7Z460 1538 aa33.52■■■□□ 2.96
HOXB3-201ENST00000311626 SCAPERQ9BY12 1400 aa33.52■■■□□ 2.96
HOXB3-201ENST00000311626 IPO9Q96P70 1041 aaKnown RBP33.51■■■□□ 2.95
HOXB3-201ENST00000311626 CCDC146Q8IYE0 955 aa33.5■■■□□ 2.95
HOXB3-201ENST00000311626 PLEKHH1Q9ULM0 1364 aa33.5■■■□□ 2.95
HOXB3-201ENST00000311626 TRPM2O94759 1503 aa33.5■■■□□ 2.95
HOXB3-201ENST00000311626 SCAF11Q99590 1463 aaKnown RBP33.49■■■□□ 2.95
HOXB3-201ENST00000311626 UGGT1Q9NYU2 1555 aa33.48■■■□□ 2.95
HOXB3-201ENST00000311626 BCL11AQ9H165 835 aa33.48■■■□□ 2.95
HOXB3-201ENST00000311626 PTPRTO14522 1441 aa33.47■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms