RNA–Protein interactions for RNA: ENST00000300403.10

TPX2-201, Transcript of TPX2, microtubule nucleation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPX2, Length 3,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPX2-201ENST00000300403 ANP32EQ9BTT0 268 aa16.61■□□□□ 0.25
TPX2-201ENST00000300403 CDC42BPBQ9Y5S2 1711 aa16.61■□□□□ 0.25
TPX2-201ENST00000300403 ERICH6BQ5W0A0 696 aa16.6■□□□□ 0.25
TPX2-201ENST00000300403 NBPF1Q3BBV0 1214 aa16.6■□□□□ 0.25
TPX2-201ENST00000300403 PREX2Q70Z35 1606 aa16.59■□□□□ 0.25
TPX2-201ENST00000300403 CHD1O14646 1710 aa16.58■□□□□ 0.24
TPX2-201ENST00000300403 PNISRQ8TF01 805 aaKnown RBP16.58■□□□□ 0.24
TPX2-201ENST00000300403 TTC37Q6PGP7 1564 aa16.58■□□□□ 0.24
TPX2-201ENST00000300403 ERCC6L2Q5T890 1561 aa16.56■□□□□ 0.24
TPX2-201ENST00000300403 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.56■□□□□ 0.247e-9■□□□□ 11
TPX2-201ENST00000300403 PLEKHH2Q8IVE3 1493 aa16.56■□□□□ 0.24
TPX2-201ENST00000300403 NUDCQ9Y266 331 aa16.55■□□□□ 0.24
TPX2-201ENST00000300403 SALL2Q9Y467 1007 aaPredicted RBP16.54■□□□□ 0.24
TPX2-201ENST00000300403 PRAG1Q86YV5 1406 aa16.53■□□□□ 0.24
TPX2-201ENST00000300403 MYBBP1AQ9BQG0 1328 aaKnown RBP16.53■□□□□ 0.24
TPX2-201ENST00000300403 SMG6Q86US8 1419 aaKnown RBP16.53■□□□□ 0.24
TPX2-201ENST00000300403 PLA2R1Q13018 1463 aa16.52■□□□□ 0.24
TPX2-201ENST00000300403 RALBP1Q15311 655 aa16.51■□□□□ 0.23
TPX2-201ENST00000300403 ABCC2Q92887 1545 aa16.5■□□□□ 0.23
TPX2-201ENST00000300403 EFCAB2Q5VUJ9 269 aa16.5■□□□□ 0.23
TPX2-201ENST00000300403 A2MP01023 1474 aa16.49■□□□□ 0.23
TPX2-201ENST00000300403 CC2D1BQ5T0F9 858 aaKnown RBP16.48■□□□□ 0.23
TPX2-201ENST00000300403 BRD4O60885 1362 aaPredicted RBP16.48■□□□□ 0.23
TPX2-201ENST00000300403 KTN1Q86UP2 1357 aaKnown RBP16.47■□□□□ 0.23
TPX2-201ENST00000300403 MYO5CQ9NQX4 1742 aa16.46■□□□□ 0.23
TPX2-201ENST00000300403 MSH5O43196 834 aa16.46■□□□□ 0.23
TPX2-201ENST00000300403 SHROOM2Q13796 1616 aa16.46■□□□□ 0.23
TPX2-201ENST00000300403 NLRP13Q86W25 1043 aa16.46■□□□□ 0.22
TPX2-201ENST00000300403 AFAP1Q8N556 730 aa16.45■□□□□ 0.22
TPX2-201ENST00000300403 CCDC136Q96JN2 1154 aa16.45■□□□□ 0.22
TPX2-201ENST00000300403 UNC13BO14795 1591 aa16.45■□□□□ 0.22
TPX2-201ENST00000300403 MAST1Q9Y2H9 1570 aa16.45■□□□□ 0.22
TPX2-201ENST00000300403 TRPM1Q7Z4N2 1603 aa16.45■□□□□ 0.22
TPX2-201ENST00000300403 MYT1LQ9UL68 1186 aa16.45■□□□□ 0.22
TPX2-201ENST00000300403 DISP3Q9P2K9 1392 aa16.45■□□□□ 0.22
TPX2-201ENST00000300403 PLCH2O75038 1416 aa16.44■□□□□ 0.22
TPX2-201ENST00000300403 TESK2Q96S53 571 aa16.44■□□□□ 0.22
TPX2-201ENST00000300403 TRAPPC8Q9Y2L5 1435 aa16.44■□□□□ 0.22
TPX2-201ENST00000300403 DUOX2Q9NRD8 1548 aa16.44■□□□□ 0.22
TPX2-201ENST00000300403 PANK3Q9H999 370 aa16.43■□□□□ 0.22
TPX2-201ENST00000300403 LRPPRCP42704 1394 aaKnown RBP16.43■□□□□ 0.22
TPX2-201ENST00000300403 SPAG9O60271 1321 aaKnown RBP16.43■□□□□ 0.22
TPX2-201ENST00000300403 PER1O15534 1290 aaPredicted RBP16.43■□□□□ 0.22
TPX2-201ENST00000300403 GPRASP1Q5JY77 1395 aa16.42■□□□□ 0.22
TPX2-201ENST00000300403 TMF1P82094 1093 aa16.42■□□□□ 0.22
TPX2-201ENST00000300403 PLXNC1O60486 1568 aa16.42■□□□□ 0.22
TPX2-201ENST00000300403 FANCIQ9NVI1 1328 aa16.41■□□□□ 0.22
TPX2-201ENST00000300403 IQGAP3Q86VI3 1631 aa16.41■□□□□ 0.22
TPX2-201ENST00000300403 ERICH6Q7L0X2 663 aa16.4■□□□□ 0.22
TPX2-201ENST00000300403 ERBINQ96RT1 1412 aa16.4■□□□□ 0.22
TPX2-201ENST00000300403 PARD3Q8TEW0 1356 aa16.4■□□□□ 0.22
TPX2-201ENST00000300403 RNF123Q5XPI4 1314 aa16.4■□□□□ 0.22
TPX2-201ENST00000300403 COL17A1Q9UMD9 1497 aaPredicted RBP16.38■□□□□ 0.21
TPX2-201ENST00000300403 ZCCHC11Q5TAX3 1644 aaKnown RBP16.38■□□□□ 0.21
TPX2-201ENST00000300403 E9PCH4 1651 aa16.38■□□□□ 0.21
TPX2-201ENST00000300403 PRDM15P57071 1507 aaPredicted RBP16.36■□□□□ 0.21
TPX2-201ENST00000300403 ABCC1P33527 1531 aa16.35■□□□□ 0.21
TPX2-201ENST00000300403 CDCA7LQ96GN5 454 aa16.35■□□□□ 0.21
TPX2-201ENST00000300403 RCAN3Q9UKA8 241 aa16.35■□□□□ 0.21
TPX2-201ENST00000300403 ATP10AO60312 1499 aa16.34■□□□□ 0.21
TPX2-201ENST00000300403 MAGI2Q86UL8 1455 aa16.34■□□□□ 0.21
TPX2-201ENST00000300403 KIF3BO15066 747 aa16.33■□□□□ 0.2
TPX2-201ENST00000300403 RRP1P56182 461 aaKnown RBP16.33■□□□□ 0.2
TPX2-201ENST00000300403 EIF2AK4Q9P2K8 1649 aaKnown RBP16.33■□□□□ 0.2
TPX2-201ENST00000300403 WASHC2CQ9Y4E1 1318 aa16.31■□□□□ 0.2
TPX2-201ENST00000300403 EXOC6Q8TAG9 804 aa16.31■□□□□ 0.2
TPX2-201ENST00000300403 KNSTRNQ9Y448 316 aa16.31■□□□□ 0.2
TPX2-201ENST00000300403 UHRF1BP1LA0JNW5 1464 aa16.31■□□□□ 0.2
TPX2-201ENST00000300403 CLASP1Q7Z460 1538 aa16.3■□□□□ 0.2
TPX2-201ENST00000300403 PDE3BQ13370 1112 aa16.29■□□□□ 0.2
TPX2-201ENST00000300403 LAMC1P11047 1609 aa16.28■□□□□ 0.2
TPX2-201ENST00000300403 SCAPERQ9BY12 1400 aa16.28■□□□□ 0.2
TPX2-201ENST00000300403 KANK1Q14678 1352 aa16.27■□□□□ 0.2
TPX2-201ENST00000300403 PLIN1O60240 522 aa16.26■□□□□ 0.19
TPX2-201ENST00000300403 ADAMTS8Q9UP79 889 aa16.26■□□□□ 0.19
TPX2-201ENST00000300403 ZFYVE16Q7Z3T8 1539 aa16.26■□□□□ 0.19
TPX2-201ENST00000300403 FANCAO15360 1455 aa16.26■□□□□ 0.19
TPX2-201ENST00000300403 RTEL1-TNFRSF6BF6WH68 1400 aa16.26■□□□□ 0.19
TPX2-201ENST00000300403 WDR43Q15061 677 aaKnown RBP eCLIP16.24■□□□□ 0.19
TPX2-201ENST00000300403 CDCA8Q53HL2 280 aa16.24■□□□□ 0.19
TPX2-201ENST00000300403 WDR7Q9Y4E6 1490 aa16.24■□□□□ 0.19
TPX2-201ENST00000300403 PPP2R1AP30153 589 aa16.23■□□□□ 0.19
TPX2-201ENST00000300403 CFAP70Q5T0N1 1121 aa16.23■□□□□ 0.19
TPX2-201ENST00000300403 TRPM2O94759 1503 aa16.23■□□□□ 0.19
TPX2-201ENST00000300403 MADDQ8WXG6 1647 aa16.22■□□□□ 0.19
TPX2-201ENST00000300403 SCAF11Q99590 1463 aaKnown RBP16.22■□□□□ 0.19
TPX2-201ENST00000300403 RNF17Q9BXT8 1623 aaKnown RBP16.22■□□□□ 0.19
TPX2-201ENST00000300403 CHGAP10645 457 aaKnown RBP16.22■□□□□ 0.19
TPX2-201ENST00000300403 ADGRL1O94910 1474 aa16.22■□□□□ 0.19
TPX2-201ENST00000300403 AMER1Q5JTC6 1135 aaPredicted RBP16.21■□□□□ 0.19
TPX2-201ENST00000300403 CLTCL1P53675 1640 aa16.21■□□□□ 0.19
TPX2-201ENST00000300403 ATP7AQ04656 1500 aa16.21■□□□□ 0.19
TPX2-201ENST00000300403 PTPRTO14522 1441 aa16.21■□□□□ 0.19
TPX2-201ENST00000300403 BLMP54132 1417 aaPredicted RBP16.2■□□□□ 0.18
TPX2-201ENST00000300403 STAC3Q96MF2 364 aa16.19■□□□□ 0.18
TPX2-201ENST00000300403 SPHKAPQ2M3C7 1700 aa16.19■□□□□ 0.18
TPX2-201ENST00000300403 ADGRF5Q8IZF2 1346 aa16.19■□□□□ 0.18
TPX2-201ENST00000300403 ANP32AP39687 249 aaKnown RBP16.18■□□□□ 0.18
TPX2-201ENST00000300403 UGGT1Q9NYU2 1555 aa16.18■□□□□ 0.18
TPX2-201ENST00000300403 EIF3AQ14152 1382 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms