RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 GOLGA2Q08379 1002 aa16.12■□□□□ 0.17
SLC6A1-201ENST00000287766 FANCIQ9NVI1 1328 aa16.12■□□□□ 0.17
SLC6A1-201ENST00000287766 SRPK2P78362 688 aaKnown RBP16.11■□□□□ 0.17
SLC6A1-201ENST00000287766 PDE4AP27815 886 aa16.1■□□□□ 0.17
SLC6A1-201ENST00000287766 TRAK1Q9UPV9 953 aa16.1■□□□□ 0.17
SLC6A1-201ENST00000287766 PLCB2Q00722 1185 aa16.1■□□□□ 0.17
SLC6A1-201ENST00000287766 KANK1Q14678 1352 aa16.1■□□□□ 0.17
SLC6A1-201ENST00000287766 VSIG10Q8N0Z9 540 aa16.09■□□□□ 0.17
SLC6A1-201ENST00000287766 MAPK8IP3Q9UPT6 1336 aa16.09■□□□□ 0.17
SLC6A1-201ENST00000287766 EHBP1L1Q8N3D4 1523 aa16.09■□□□□ 0.17
SLC6A1-201ENST00000287766 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.09■□□□□ 0.17
SLC6A1-201ENST00000287766 BCL2L13Q9BXK5 485 aa16.09■□□□□ 0.17
SLC6A1-201ENST00000287766 U2AF1L5P0DN76 240 aaPredicted RBP16.08■□□□□ 0.17
SLC6A1-201ENST00000287766 U2AF1Q01081 240 aaKnown RBP eCLIP16.08■□□□□ 0.17
SLC6A1-201ENST00000287766 GRIN2BQ13224 1484 aa16.08■□□□□ 0.16
SLC6A1-201ENST00000287766 PDE3BQ13370 1112 aa16.07■□□□□ 0.16
SLC6A1-201ENST00000287766 APAF1O14727 1248 aa16.07■□□□□ 0.16
SLC6A1-201ENST00000287766 RSPH4AQ5TD94 716 aa16.07■□□□□ 0.16
SLC6A1-201ENST00000287766 EPRSP07814 1512 aaKnown RBP16.07■□□□□ 0.16
SLC6A1-201ENST00000287766 GZF1Q9H116 711 aaPredicted RBP16.07■□□□□ 0.16
SLC6A1-201ENST00000287766 PNISRQ8TF01 805 aaKnown RBP16.06■□□□□ 0.16
SLC6A1-201ENST00000287766 MLECQ14165 292 aa16.06■□□□□ 0.16
SLC6A1-201ENST00000287766 DAPK1P53355 1430 aa16.06■□□□□ 0.16
SLC6A1-201ENST00000287766 MAP3K1Q13233 1512 aa16.05■□□□□ 0.16
SLC6A1-201ENST00000287766 SLKQ9H2G2 1235 aaPredicted RBP16.05■□□□□ 0.16
SLC6A1-201ENST00000287766 MSH5O43196 834 aa16.05■□□□□ 0.16
SLC6A1-201ENST00000287766 PAK3O75914 559 aaPredicted RBP16.05■□□□□ 0.16
SLC6A1-201ENST00000287766 ZBTB7CA1YPR0 619 aa16.04■□□□□ 0.16
SLC6A1-201ENST00000287766 SOX12O15370 315 aa16.04■□□□□ 0.16
SLC6A1-201ENST00000287766 L1TD1Q5T7N2 865 aaKnown RBP16.04■□□□□ 0.16
SLC6A1-201ENST00000287766 SUPT6HQ7KZ85 1726 aaKnown RBP16.03■□□□□ 0.16
SLC6A1-201ENST00000287766 MIA2Q96PC5 1412 aa16.03■□□□□ 0.16
SLC6A1-201ENST00000287766 ADAMTS8Q9UP79 889 aa16.03■□□□□ 0.16
SLC6A1-201ENST00000287766 ANKRD30BQ9BXX2 1392 aa16.02■□□□□ 0.16
SLC6A1-201ENST00000287766 AFAP1Q8N556 730 aa16.02■□□□□ 0.15
SLC6A1-201ENST00000287766 URB2Q14146 1524 aaKnown RBP16.02■□□□□ 0.15
SLC6A1-201ENST00000287766 KIAA1107Q9UPP5 1409 aa16.01■□□□□ 0.15
SLC6A1-201ENST00000287766 PTPN23Q9H3S7 1636 aa16.01■□□□□ 0.15
SLC6A1-201ENST00000287766 MSNP26038 577 aaKnown RBP16.01■□□□□ 0.15
SLC6A1-201ENST00000287766 ANO8Q9HCE9 1232 aaPredicted RBP16.01■□□□□ 0.15
SLC6A1-201ENST00000287766 SKAP1Q86WV1 359 aa16■□□□□ 0.15
SLC6A1-201ENST00000287766 MYH16Q9H6N6 1097 aa16■□□□□ 0.15
SLC6A1-201ENST00000287766 ABCC5O15440 1437 aa15.99■□□□□ 0.15
SLC6A1-201ENST00000287766 COG6Q9Y2V7 657 aa15.98■□□□□ 0.15
SLC6A1-201ENST00000287766 TROQ12816 1431 aaPredicted RBP15.98■□□□□ 0.15
SLC6A1-201ENST00000287766 HSP90AA2PQ14568 343 aaPredicted RBP15.98■□□□□ 0.15
SLC6A1-201ENST00000287766 C14orf37Q86TY3 774 aa15.98■□□□□ 0.15
SLC6A1-201ENST00000287766 SNAPC4Q5SXM2 1469 aa15.97■□□□□ 0.15
SLC6A1-201ENST00000287766 C9orf84Q5VXU9 1444 aa15.96■□□□□ 0.15
SLC6A1-201ENST00000287766 CENPJQ9HC77 1338 aaPredicted RBP15.96■□□□□ 0.15
SLC6A1-201ENST00000287766 PLB1Q6P1J6 1458 aa15.96■□□□□ 0.15
SLC6A1-201ENST00000287766 HECW1Q76N89 1606 aa15.96■□□□□ 0.14
SLC6A1-201ENST00000287766 PRKCSHP14314 528 aaPredicted RBP15.95■□□□□ 0.14
SLC6A1-201ENST00000287766 ITPRIPQ8IWB1 547 aa15.95■□□□□ 0.14
SLC6A1-201ENST00000287766 BRD4O60885 1362 aaPredicted RBP15.94■□□□□ 0.14
SLC6A1-201ENST00000287766 WASHC2CQ9Y4E1 1318 aa15.94■□□□□ 0.14
SLC6A1-201ENST00000287766 HSP90AB1P08238 724 aaKnown RBP15.94■□□□□ 0.14
SLC6A1-201ENST00000287766 CFAP70Q5T0N1 1121 aa15.93■□□□□ 0.14
SLC6A1-201ENST00000287766 APBB1O00213 710 aa15.93■□□□□ 0.14
SLC6A1-201ENST00000287766 TMEM132EQ6IEE7 984 aa15.92■□□□□ 0.14
SLC6A1-201ENST00000287766 IQGAP2Q13576 1575 aa15.92■□□□□ 0.14
SLC6A1-201ENST00000287766 SMC4Q9NTJ3 1288 aa15.92■□□□□ 0.14
SLC6A1-201ENST00000287766 EIF3AQ14152 1382 aaKnown RBP15.92■□□□□ 0.14
SLC6A1-201ENST00000287766 NCOA1Q15788 1441 aa15.91■□□□□ 0.14
SLC6A1-201ENST00000287766 MRC2Q9UBG0 1479 aa15.91■□□□□ 0.14
SLC6A1-201ENST00000287766 ZNF608Q9ULD9 1512 aaPredicted RBP15.91■□□□□ 0.14
SLC6A1-201ENST00000287766 CUL7Q14999 1698 aa15.9■□□□□ 0.14
SLC6A1-201ENST00000287766 CENPQQ7L2Z9 268 aaPredicted RBP15.9■□□□□ 0.14
SLC6A1-201ENST00000287766 MFAP1P55081 439 aaKnown RBP15.89■□□□□ 0.14
SLC6A1-201ENST00000287766 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.89■□□□□ 0.14
SLC6A1-201ENST00000287766 THOC2Q8NI27 1593 aaKnown RBP15.89■□□□□ 0.13
SLC6A1-201ENST00000287766 ELL2O00472 640 aaPredicted RBP15.89■□□□□ 0.13
SLC6A1-201ENST00000287766 PPP2R1AP30153 589 aa15.89■□□□□ 0.13
SLC6A1-201ENST00000287766 ARHGEF11O15085 1522 aa15.88■□□□□ 0.13
SLC6A1-201ENST00000287766 PANK1Q8TE04 598 aa15.88■□□□□ 0.13
SLC6A1-201ENST00000287766 RSPH6AQ9H0K4 717 aa15.88■□□□□ 0.13
SLC6A1-201ENST00000287766 ROCK1Q13464 1354 aa15.88■□□□□ 0.13
SLC6A1-201ENST00000287766 FAM161AQ3B820 660 aa15.88■□□□□ 0.13
SLC6A1-201ENST00000287766 SMG6Q86US8 1419 aaKnown RBP15.88■□□□□ 0.13
SLC6A1-201ENST00000287766 KIAA0586Q9BVV6 1533 aa15.87■□□□□ 0.13
SLC6A1-201ENST00000287766 NUTM2FA1L443 756 aa15.87■□□□□ 0.13
SLC6A1-201ENST00000287766 RWDD1Q9H446 243 aaPredicted RBP15.87■□□□□ 0.13
SLC6A1-201ENST00000287766 RPRD2Q5VT52 1461 aaKnown RBP15.87■□□□□ 0.13
SLC6A1-201ENST00000287766 HSCBQ8IWL3 235 aa15.86■□□□□ 0.13
SLC6A1-201ENST00000287766 E9PSI1 815 aa15.86■□□□□ 0.13
SLC6A1-201ENST00000287766 ARHGAP5Q13017 1502 aa15.85■□□□□ 0.13
SLC6A1-201ENST00000287766 CAMSAP2Q08AD1 1489 aa15.85■□□□□ 0.13
SLC6A1-201ENST00000287766 IFT140Q96RY7 1462 aa15.85■□□□□ 0.13
SLC6A1-201ENST00000287766 BCAR3O75815 825 aa15.85■□□□□ 0.13
SLC6A1-201ENST00000287766 GOLGA6L3A6NEY3 463 aa15.85■□□□□ 0.13
SLC6A1-201ENST00000287766 GSE1Q14687 1217 aa15.84■□□□□ 0.13
SLC6A1-201ENST00000287766 MINK1Q8N4C8 1332 aaPredicted RBP15.84■□□□□ 0.13
SLC6A1-201ENST00000287766 C20orf194Q5TEA3 1177 aa15.84■□□□□ 0.13
SLC6A1-201ENST00000287766 MS4A1P11836 297 aa15.84■□□□□ 0.13
SLC6A1-201ENST00000287766 CHAF1AQ13111 956 aaPredicted RBP15.84■□□□□ 0.13
SLC6A1-201ENST00000287766 HDGFL2Q7Z4V5 671 aaPredicted RBP15.84■□□□□ 0.13
SLC6A1-201ENST00000287766 SYNJ2O15056 1496 aa15.82■□□□□ 0.12
SLC6A1-201ENST00000287766 FOXD4L1Q9NU39 408 aa15.82■□□□□ 0.12
SLC6A1-201ENST00000287766 LAMC3Q9Y6N6 1575 aa15.82■□□□□ 0.12
SLC6A1-201ENST00000287766 ZRSR1Q15695 479 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms