RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 ARID3AQ99856 593 aa18.2■□□□□ 0.5
VPS26B-201ENST00000281187 RRP7AQ9Y3A4 280 aaKnown RBP18.2■□□□□ 0.5
VPS26B-201ENST00000281187 FTSJ3Q8IY81 847 aaKnown RBP18.19■□□□□ 0.5
VPS26B-201ENST00000281187 PANK1Q8TE04 598 aa18.19■□□□□ 0.5
VPS26B-201ENST00000281187 NCLP19338 710 aaKnown RBP18.18■□□□□ 0.5
VPS26B-201ENST00000281187 CHMP7Q8WUX9 453 aaPredicted RBP18.18■□□□□ 0.5
VPS26B-201ENST00000281187 MIA2Q96PC5 1412 aa18.18■□□□□ 0.5
VPS26B-201ENST00000281187 FOXD4L1Q9NU39 408 aa18.17■□□□□ 0.5
VPS26B-201ENST00000281187 SUPT6HQ7KZ85 1726 aaKnown RBP18.16■□□□□ 0.5
VPS26B-201ENST00000281187 EHBP1L1Q8N3D4 1523 aa18.16■□□□□ 0.5
VPS26B-201ENST00000281187 CDK13Q14004 1512 aaKnown RBP18.16■□□□□ 0.5
VPS26B-201ENST00000281187 MYH16Q9H6N6 1097 aa18.14■□□□□ 0.5
VPS26B-201ENST00000281187 CFAP43Q8NDM7 1665 aa18.14■□□□□ 0.49
VPS26B-201ENST00000281187 CENPJQ9HC77 1338 aaPredicted RBP18.13■□□□□ 0.49
VPS26B-201ENST00000281187 HSCBQ8IWL3 235 aa18.13■□□□□ 0.49
VPS26B-201ENST00000281187 DAPK1P53355 1430 aa18.13■□□□□ 0.49
VPS26B-201ENST00000281187 HSP90AB1P08238 724 aaKnown RBP18.12■□□□□ 0.49
VPS26B-201ENST00000281187 POLA1P09884 1462 aaPredicted RBP18.12■□□□□ 0.49
VPS26B-201ENST00000281187 C8orf34Q49A92 452 aa18.11■□□□□ 0.49
VPS26B-201ENST00000281187 ZBTB7CA1YPR0 619 aa18.11■□□□□ 0.49
VPS26B-201ENST00000281187 KIAA1107Q9UPP5 1409 aa18.11■□□□□ 0.49
VPS26B-201ENST00000281187 PKNOX2Q96KN3 472 aa18.11■□□□□ 0.49
VPS26B-201ENST00000281187 GAPVD1Q14C86 1478 aa18.1■□□□□ 0.49
VPS26B-201ENST00000281187 CDCA8Q53HL2 280 aa18.1■□□□□ 0.49
VPS26B-201ENST00000281187 ANKRD50Q9ULJ7 1429 aa18.09■□□□□ 0.49
VPS26B-201ENST00000281187 MAPK8IP3Q9UPT6 1336 aa18.08■□□□□ 0.48
VPS26B-201ENST00000281187 ABCC5O15440 1437 aa18.07■□□□□ 0.48
VPS26B-201ENST00000281187 PPP2R1AP30153 589 aa18.06■□□□□ 0.48
VPS26B-201ENST00000281187 CCDC144AA2RUR9 1427 aa18.06■□□□□ 0.48
VPS26B-201ENST00000281187 PDS5BQ9NTI5 1447 aa18.06■□□□□ 0.48
VPS26B-201ENST00000281187 NESP48681 1621 aa18.06■□□□□ 0.48
VPS26B-201ENST00000281187 TPRNQ4KMQ1 711 aa18.05■□□□□ 0.48
VPS26B-201ENST00000281187 CGNL1Q0VF96 1302 aa18.05■□□□□ 0.48
VPS26B-201ENST00000281187 SPATA31E1Q6ZUB1 1445 aa18.05■□□□□ 0.48
VPS26B-201ENST00000281187 RWDD1Q9H446 243 aaPredicted RBP18.05■□□□□ 0.48
VPS26B-201ENST00000281187 HMGXB3Q12766 1538 aa18.04■□□□□ 0.48
VPS26B-201ENST00000281187 SNAPC4Q5SXM2 1469 aa18.04■□□□□ 0.48
VPS26B-201ENST00000281187 DUSP27Q5VZP5 1158 aa18.04■□□□□ 0.48
VPS26B-201ENST00000281187 SEC24BO95487 1268 aa18.04■□□□□ 0.48
VPS26B-201ENST00000281187 IGHDP01880 384 aa18.04■□□□□ 0.48
VPS26B-201ENST00000281187 PMFBP1Q8TBY8 1022 aa18.04■□□□□ 0.48
VPS26B-201ENST00000281187 EPRSP07814 1512 aaKnown RBP18.04■□□□□ 0.48
VPS26B-201ENST00000281187 E9PSI1 815 aa18.03■□□□□ 0.48
VPS26B-201ENST00000281187 PANK2Q9BZ23 570 aa18.03■□□□□ 0.48
VPS26B-201ENST00000281187 KDM6BO15054 1643 aa18.03■□□□□ 0.48
VPS26B-201ENST00000281187 GOLGA6L22H0YM25 854 aa18.03■□□□□ 0.48
VPS26B-201ENST00000281187 RRAGDQ9NQL2 400 aaPredicted RBP18.02■□□□□ 0.48
VPS26B-201ENST00000281187 TRAK2O60296 914 aa18.02■□□□□ 0.48
VPS26B-201ENST00000281187 LRPPRCP42704 1394 aaKnown RBP18.02■□□□□ 0.48
VPS26B-201ENST00000281187 ITPRIPQ8IWB1 547 aa18.02■□□□□ 0.47
VPS26B-201ENST00000281187 TOPBP1Q92547 1522 aa18.01■□□□□ 0.47
VPS26B-201ENST00000281187 TEX14Q8IWB6 1497 aa18.01■□□□□ 0.47
VPS26B-201ENST00000281187 KDM5BQ9UGL1 1544 aa18.01■□□□□ 0.47
VPS26B-201ENST00000281187 U2SURPO15042 1029 aaKnown RBP18.01■□□□□ 0.47
VPS26B-201ENST00000281187 MORC1Q86VD1 984 aa18.01■□□□□ 0.47
VPS26B-201ENST00000281187 PRG4Q92954 1404 aaPredicted RBP18■□□□□ 0.47
VPS26B-201ENST00000281187 UGGT2Q9NYU1 1516 aa17.99■□□□□ 0.47
VPS26B-201ENST00000281187 GRIN2BQ13224 1484 aa17.99■□□□□ 0.47
VPS26B-201ENST00000281187 MSNP26038 577 aaKnown RBP17.99■□□□□ 0.47
VPS26B-201ENST00000281187 PDZRN3Q9UPQ7 1066 aa17.99■□□□□ 0.47
VPS26B-201ENST00000281187 ROCK1Q13464 1354 aa17.98■□□□□ 0.47
VPS26B-201ENST00000281187 CHMP5Q9NZZ3 219 aa17.98■□□□□ 0.47
VPS26B-201ENST00000281187 SLFN5Q08AF3 891 aa17.97■□□□□ 0.47
VPS26B-201ENST00000281187 ABCA10Q8WWZ4 1543 aa17.97■□□□□ 0.47
VPS26B-201ENST00000281187 C22orf23Q9BZE7 217 aa17.97■□□□□ 0.47
VPS26B-201ENST00000281187 U2AF1L5P0DN76 240 aaPredicted RBP17.96■□□□□ 0.47
VPS26B-201ENST00000281187 MCM4P33991 863 aa17.96■□□□□ 0.47
VPS26B-201ENST00000281187 U2AF1Q01081 240 aaKnown RBP eCLIP17.96■□□□□ 0.47
VPS26B-201ENST00000281187 PRDM2Q13029 1718 aa17.96■□□□□ 0.47
VPS26B-201ENST00000281187 TBC1D2Q9BYX2 928 aa17.96■□□□□ 0.47
VPS26B-201ENST00000281187 CFAP53Q96M91 514 aa17.95■□□□□ 0.46
VPS26B-201ENST00000281187 SMC4Q9NTJ3 1288 aa17.95■□□□□ 0.46
VPS26B-201ENST00000281187 XRCC6P12956 609 aaKnown RBP eCLIP17.95■□□□□ 0.46
VPS26B-201ENST00000281187 GBP4Q96PP9 640 aa17.95■□□□□ 0.46
VPS26B-201ENST00000281187 DENND4BO75064 1496 aaPredicted RBP17.95■□□□□ 0.46
VPS26B-201ENST00000281187 KDM2BQ8NHM5 1336 aa17.94■□□□□ 0.46
VPS26B-201ENST00000281187 DISP3Q9P2K9 1392 aa17.93■□□□□ 0.46
VPS26B-201ENST00000281187 MRE11P49959 708 aa17.93■□□□□ 0.46
VPS26B-201ENST00000281187 SPINK5Q9NQ38 1064 aaPredicted RBP17.93■□□□□ 0.46
VPS26B-201ENST00000281187 PLEKHH1Q9ULM0 1364 aa17.93■□□□□ 0.46
VPS26B-201ENST00000281187 PER1O15534 1290 aaPredicted RBP17.92■□□□□ 0.46
VPS26B-201ENST00000281187 DNTTIP2Q5QJE6 756 aaKnown RBP17.92■□□□□ 0.46
VPS26B-201ENST00000281187 DDX11L8A8MPP1 907 aa17.92■□□□□ 0.46
VPS26B-201ENST00000281187 THOC2Q8NI27 1593 aaKnown RBP17.92■□□□□ 0.46
VPS26B-201ENST00000281187 PTMAP06454 111 aaKnown RBP17.92■□□□□ 0.46
VPS26B-201ENST00000281187 ZMYND15Q9H091 742 aa17.92■□□□□ 0.46
VPS26B-201ENST00000281187 PARD3Q8TEW0 1356 aa17.92■□□□□ 0.46
VPS26B-201ENST00000281187 SAFB2Q14151 953 aaKnown RBP eCLIP17.91■□□□□ 0.46
VPS26B-201ENST00000281187 HECW1Q76N89 1606 aa17.91■□□□□ 0.46
VPS26B-201ENST00000281187 MAGI3Q5TCQ9 1506 aa17.9■□□□□ 0.46
VPS26B-201ENST00000281187 ESPNB1AK53 854 aa17.9■□□□□ 0.46
VPS26B-201ENST00000281187 GRPEL1Q9HAV7 217 aa17.89■□□□□ 0.45
VPS26B-201ENST00000281187 FAM13BQ9NYF5 915 aa17.89■□□□□ 0.45
VPS26B-201ENST00000281187 DDX49Q9Y6V7 483 aaKnown RBP17.88■□□□□ 0.45
VPS26B-201ENST00000281187 APBB1O00213 710 aa17.88■□□□□ 0.45
VPS26B-201ENST00000281187 RBM10P98175 930 aaKnown RBP17.88■□□□□ 0.45
VPS26B-201ENST00000281187 LNPKQ9C0E8 428 aa17.88■□□□□ 0.45
VPS26B-201ENST00000281187 PDE3AQ14432 1141 aa17.88■□□□□ 0.45
VPS26B-201ENST00000281187 TNNQ9UQP3 1299 aa17.87■□□□□ 0.45
VPS26B-201ENST00000281187 ERBINQ96RT1 1412 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms