RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 POGKQ9P215 609 aa14.62□□□□□ -0.07
SKP2-202ENST00000274255 GGT6Q6P531 493 aa14.62□□□□□ -0.07
SKP2-202ENST00000274255 ITPRIPQ8IWB1 547 aa14.61□□□□□ -0.07
SKP2-202ENST00000274255 NCOA1Q15788 1441 aa14.61□□□□□ -0.07
SKP2-202ENST00000274255 PDE3BQ13370 1112 aa14.61□□□□□ -0.07
SKP2-202ENST00000274255 FOXD4L5Q5VV16 416 aaPredicted RBP14.61□□□□□ -0.07
SKP2-202ENST00000274255 FOXD4L4Q8WXT5 416 aaPredicted RBP14.61□□□□□ -0.07
SKP2-202ENST00000274255 TRIM44Q96DX7 344 aaPredicted RBP14.61□□□□□ -0.07
SKP2-202ENST00000274255 CENPQQ7L2Z9 268 aaPredicted RBP14.6□□□□□ -0.07
SKP2-202ENST00000274255 FYCO1Q9BQS8 1478 aa14.6□□□□□ -0.07
SKP2-202ENST00000274255 POLA1P09884 1462 aaPredicted RBP14.6□□□□□ -0.07
SKP2-202ENST00000274255 STAG3Q9UJ98 1225 aa14.59□□□□□ -0.07
SKP2-202ENST00000274255 CENPJQ9HC77 1338 aaPredicted RBP14.59□□□□□ -0.07
SKP2-202ENST00000274255 UNC13AQ9UPW8 1703 aa14.59□□□□□ -0.07
SKP2-202ENST00000274255 KIF3BO15066 747 aa14.57□□□□□ -0.08
SKP2-202ENST00000274255 HSP90AB1P08238 724 aaKnown RBP14.57□□□□□ -0.08
SKP2-202ENST00000274255 MS4A1P11836 297 aa14.57□□□□□ -0.08
SKP2-202ENST00000274255 FOXD4L6Q3SYB3 417 aaPredicted RBP14.57□□□□□ -0.08
SKP2-202ENST00000274255 FOXD4L3Q6VB84 417 aaPredicted RBP14.57□□□□□ -0.08
SKP2-202ENST00000274255 ANKRD50Q9ULJ7 1429 aa14.57□□□□□ -0.08
SKP2-202ENST00000274255 PPP2R1AP30153 589 aa14.56□□□□□ -0.08
SKP2-202ENST00000274255 TMEM132EQ6IEE7 984 aa14.56□□□□□ -0.08
SKP2-202ENST00000274255 USP35Q9P2H5 1018 aa14.56□□□□□ -0.08
SKP2-202ENST00000274255 CCDC144AA2RUR9 1427 aa14.55□□□□□ -0.08
SKP2-202ENST00000274255 SMC4Q9NTJ3 1288 aa14.55□□□□□ -0.08
SKP2-202ENST00000274255 TNNQ9UQP3 1299 aa14.55□□□□□ -0.08
SKP2-202ENST00000274255 SRPK2P78362 688 aaKnown RBP14.54□□□□□ -0.08
SKP2-202ENST00000274255 CFAP70Q5T0N1 1121 aa14.54□□□□□ -0.08
SKP2-202ENST00000274255 NOL8Q76FK4 1167 aaKnown RBP14.54□□□□□ -0.08
SKP2-202ENST00000274255 CDCA8Q53HL2 280 aa14.53□□□□□ -0.08
SKP2-202ENST00000274255 ANP32BQ92688 251 aaKnown RBP14.53□□□□□ -0.08
SKP2-202ENST00000274255 PTPN23Q9H3S7 1636 aa14.53□□□□□ -0.08
SKP2-202ENST00000274255 BRD4O60885 1362 aaPredicted RBP14.53□□□□□ -0.08
SKP2-202ENST00000274255 TSR2Q969E8 191 aaKnown RBP14.53□□□□□ -0.08
SKP2-202ENST00000274255 SEC24BO95487 1268 aa14.52□□□□□ -0.08
SKP2-202ENST00000274255 PNNQ9H307 717 aaKnown RBP14.52□□□□□ -0.08
SKP2-202ENST00000274255 IGHDP01880 384 aa14.52□□□□□ -0.09
SKP2-202ENST00000274255 CFAP53Q96M91 514 aa14.52□□□□□ -0.09
SKP2-202ENST00000274255 PLCB2Q00722 1185 aa14.52□□□□□ -0.09
SKP2-202ENST00000274255 SPINK5Q9NQ38 1064 aaPredicted RBP14.52□□□□□ -0.09
SKP2-202ENST00000274255 MAPK8IP3Q9UPT6 1336 aa14.51□□□□□ -0.09
SKP2-202ENST00000274255 AFAP1Q8N556 730 aa14.51□□□□□ -0.09
SKP2-202ENST00000274255 HSCBQ8IWL3 235 aa14.51□□□□□ -0.09
SKP2-202ENST00000274255 NUTM2FA1L443 756 aa14.5□□□□□ -0.09
SKP2-202ENST00000274255 GOLGA6L3A6NEY3 463 aa14.5□□□□□ -0.09
SKP2-202ENST00000274255 LNPKQ9C0E8 428 aa14.5□□□□□ -0.09
SKP2-202ENST00000274255 PRDM2Q13029 1718 aa14.5□□□□□ -0.09
SKP2-202ENST00000274255 DAPK1P53355 1430 aa14.5□□□□□ -0.09
SKP2-202ENST00000274255 SLC12A5Q9H2X9 1139 aa14.5□□□□□ -0.09
SKP2-202ENST00000274255 ABCC5O15440 1437 aa14.49□□□□□ -0.09
SKP2-202ENST00000274255 TOPBP1Q92547 1522 aa14.49□□□□□ -0.09
SKP2-202ENST00000274255 VSIG10Q8N0Z9 540 aa14.48□□□□□ -0.09
SKP2-202ENST00000274255 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.48□□□□□ -0.09
SKP2-202ENST00000274255 DHX29Q7Z478 1369 aaKnown RBP14.48□□□□□ -0.09
SKP2-202ENST00000274255 C1orf115Q9H7X2 142 aa14.47□□□□□ -0.09
SKP2-202ENST00000274255 PDZRN3Q9UPQ7 1066 aa14.47□□□□□ -0.09
SKP2-202ENST00000274255 TCP11L2Q8N4U5 519 aa14.47□□□□□ -0.09
SKP2-202ENST00000274255 MPNDQ8N594 471 aa14.47□□□□□ -0.09
SKP2-202ENST00000274255 RWDD1Q9H446 243 aaPredicted RBP14.47□□□□□ -0.09
SKP2-202ENST00000274255 KIAA1107Q9UPP5 1409 aa14.46□□□□□ -0.09
SKP2-202ENST00000274255 DMRT2Q9Y5R5 561 aa14.46□□□□□ -0.09
SKP2-202ENST00000274255 TAOK2Q9UL54 1235 aa14.46□□□□□ -0.09
SKP2-202ENST00000274255 DUSP27Q5VZP5 1158 aa14.45□□□□□ -0.1
SKP2-202ENST00000274255 MAP3K1Q13233 1512 aa14.45□□□□□ -0.1
SKP2-202ENST00000274255 MTHFSP49914 203 aa14.45□□□□□ -0.1
SKP2-202ENST00000274255 EPRSP07814 1512 aaKnown RBP14.44□□□□□ -0.1
SKP2-202ENST00000274255 E9PSI1 815 aa14.44□□□□□ -0.1
SKP2-202ENST00000274255 GGNBP2Q9H3C7 697 aa14.44□□□□□ -0.1
SKP2-202ENST00000274255 DISP3Q9P2K9 1392 aa14.44□□□□□ -0.1
SKP2-202ENST00000274255 ANKRD45Q5TZF3 282 aa14.44□□□□□ -0.1
SKP2-202ENST00000274255 MLECQ14165 292 aa14.44□□□□□ -0.1
SKP2-202ENST00000274255 RPRD2Q5VT52 1461 aaKnown RBP14.43□□□□□ -0.1
SKP2-202ENST00000274255 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.43□□□□□ -0.1
SKP2-202ENST00000274255 FBLN1P23142 703 aa14.42□□□□□ -0.1
SKP2-202ENST00000274255 MYH16Q9H6N6 1097 aa14.42□□□□□ -0.1
SKP2-202ENST00000274255 ERCC6Q03468 1493 aa14.42□□□□□ -0.1
SKP2-202ENST00000274255 BIVM-ERCC5R4GMW8 1640 aa14.42□□□□□ -0.1
SKP2-202ENST00000274255 GLIPR1L2Q4G1C9 344 aa14.42□□□□□ -0.1
SKP2-202ENST00000274255 PANK2Q9BZ23 570 aa14.42□□□□□ -0.1
SKP2-202ENST00000274255 L1TD1Q5T7N2 865 aaKnown RBP14.41□□□□□ -0.1
SKP2-202ENST00000274255 C8orf34Q49A92 452 aa14.41□□□□□ -0.1
SKP2-202ENST00000274255 DNTTIP2Q5QJE6 756 aaKnown RBP14.4□□□□□ -0.1
SKP2-202ENST00000274255 PTMAP06454 111 aaKnown RBP14.4□□□□□ -0.1
SKP2-202ENST00000274255 HMOX1P09601 288 aa14.4□□□□□ -0.1
SKP2-202ENST00000274255 CABP2Q9NPB3 220 aa14.4□□□□□ -0.1
SKP2-202ENST00000274255 PLB1Q6P1J6 1458 aa14.4□□□□□ -0.1
SKP2-202ENST00000274255 SLFN5Q08AF3 891 aa14.39□□□□□ -0.11
SKP2-202ENST00000274255 PMFBP1Q8TBY8 1022 aa14.39□□□□□ -0.11
SKP2-202ENST00000274255 C22orf23Q9BZE7 217 aa14.39□□□□□ -0.11
SKP2-202ENST00000274255 BCL11BQ9C0K0 894 aaPredicted RBP14.39□□□□□ -0.11
SKP2-202ENST00000274255 KDM6BO15054 1643 aa14.39□□□□□ -0.11
SKP2-202ENST00000274255 ZNF428Q96B54 188 aa14.38□□□□□ -0.11
SKP2-202ENST00000274255 SPAG9O60271 1321 aaKnown RBP14.38□□□□□ -0.11
SKP2-202ENST00000274255 MINK1Q8N4C8 1332 aaPredicted RBP14.38□□□□□ -0.11
SKP2-202ENST00000274255 THOC2Q8NI27 1593 aaKnown RBP14.38□□□□□ -0.11
SKP2-202ENST00000274255 EXOSC9Q06265 439 aaKnown RBP14.38□□□□□ -0.11
SKP2-202ENST00000274255 PLEKHH1Q9ULM0 1364 aa14.38□□□□□ -0.11
SKP2-202ENST00000274255 CGNL1Q0VF96 1302 aa14.37□□□□□ -0.11
SKP2-202ENST00000274255 THUMPD2Q9BTF0 503 aaKnown RBP14.37□□□□□ -0.11
SKP2-202ENST00000274255 GOLGA6L22H0YM25 854 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms