RNA–Protein interactions for RNA: ENST00000266742.8

NEDD1-201, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEDD1, Length 4,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-201ENST00000266742 MYBBP1AQ9BQG0 1328 aaKnown RBP11.05□□□□□ -0.64
NEDD1-201ENST00000266742 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.05□□□□□ -0.64
NEDD1-201ENST00000266742 BRD4O60885 1362 aaPredicted RBP11.04□□□□□ -0.64
NEDD1-201ENST00000266742 PNISRQ8TF01 805 aaKnown RBP11.04□□□□□ -0.64
NEDD1-201ENST00000266742 B4GALNT3Q6L9W6 998 aa11.04□□□□□ -0.64
NEDD1-201ENST00000266742 ARHGAP5Q13017 1502 aa11.03□□□□□ -0.64
NEDD1-201ENST00000266742 FAM135AQ9P2D6 1515 aa11.03□□□□□ -0.64
NEDD1-201ENST00000266742 RGL3Q3MIN7 710 aa11.03□□□□□ -0.64
NEDD1-201ENST00000266742 BCORL1Q5H9F3 1711 aa11.02□□□□□ -0.65
NEDD1-201ENST00000266742 CCDC136Q96JN2 1154 aa11.02□□□□□ -0.65
NEDD1-201ENST00000266742 NLRP13Q86W25 1043 aa11.01□□□□□ -0.65
NEDD1-201ENST00000266742 PREX2Q70Z35 1606 aa11.01□□□□□ -0.65
NEDD1-201ENST00000266742 EFCAB2Q5VUJ9 269 aa11□□□□□ -0.65
NEDD1-201ENST00000266742 WASHC2CQ9Y4E1 1318 aa11□□□□□ -0.65
NEDD1-201ENST00000266742 SAMD9LQ8IVG5 1584 aa11□□□□□ -0.65
NEDD1-201ENST00000266742 PRAG1Q86YV5 1406 aa10.99□□□□□ -0.65
NEDD1-201ENST00000266742 TMF1P82094 1093 aa10.99□□□□□ -0.65
NEDD1-201ENST00000266742 PDE3BQ13370 1112 aa10.99□□□□□ -0.65
NEDD1-201ENST00000266742 SYCP2Q9BX26 1530 aa10.98□□□□□ -0.65
NEDD1-201ENST00000266742 MAST1Q9Y2H9 1570 aa10.98□□□□□ -0.65
NEDD1-201ENST00000266742 RNF123Q5XPI4 1314 aa10.97□□□□□ -0.65
NEDD1-201ENST00000266742 LRPPRCP42704 1394 aaKnown RBP10.97□□□□□ -0.65
NEDD1-201ENST00000266742 CDC42BPBQ9Y5S2 1711 aa10.96□□□□□ -0.65
NEDD1-201ENST00000266742 GPRASP1Q5JY77 1395 aa10.96□□□□□ -0.65
NEDD1-201ENST00000266742 DUOX2Q9NRD8 1548 aa10.96□□□□□ -0.65
NEDD1-201ENST00000266742 STAC3Q96MF2 364 aa10.96□□□□□ -0.65
NEDD1-201ENST00000266742 ERBINQ96RT1 1412 aa10.96□□□□□ -0.66
NEDD1-201ENST00000266742 ABCC2Q92887 1545 aa10.96□□□□□ -0.66
NEDD1-201ENST00000266742 CDCA8Q53HL2 280 aa10.95□□□□□ -0.66
NEDD1-201ENST00000266742 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.95□□□□□ -0.66
NEDD1-201ENST00000266742 NBPF1Q3BBV0 1214 aa10.95□□□□□ -0.66
NEDD1-201ENST00000266742 UNC13BO14795 1591 aa10.95□□□□□ -0.66
NEDD1-201ENST00000266742 EIF2AK4Q9P2K8 1649 aaKnown RBP10.94□□□□□ -0.66
NEDD1-201ENST00000266742 PLCH2O75038 1416 aa10.94□□□□□ -0.66
NEDD1-201ENST00000266742 PLXNC1O60486 1568 aa10.94□□□□□ -0.66
NEDD1-201ENST00000266742 PARD3Q8TEW0 1356 aa10.94□□□□□ -0.66
NEDD1-201ENST00000266742 MYT1LQ9UL68 1186 aa10.93□□□□□ -0.66
NEDD1-201ENST00000266742 ATP10AO60312 1499 aa10.93□□□□□ -0.66
NEDD1-201ENST00000266742 TTC37Q6PGP7 1564 aa10.92□□□□□ -0.66
NEDD1-201ENST00000266742 A2MP01023 1474 aa10.92□□□□□ -0.66
NEDD1-201ENST00000266742 RCAN3Q9UKA8 241 aa10.92□□□□□ -0.66
NEDD1-201ENST00000266742 MYO5CQ9NQX4 1742 aa10.92□□□□□ -0.66
NEDD1-201ENST00000266742 SPAG9O60271 1321 aaKnown RBP10.92□□□□□ -0.66
NEDD1-201ENST00000266742 TRPM1Q7Z4N2 1603 aa10.92□□□□□ -0.66
NEDD1-201ENST00000266742 SLC24A1O60721 1099 aa10.92□□□□□ -0.66
NEDD1-201ENST00000266742 IQGAP3Q86VI3 1631 aa10.91□□□□□ -0.66
NEDD1-201ENST00000266742 CC2D1BQ5T0F9 858 aaKnown RBP10.91□□□□□ -0.66
NEDD1-201ENST00000266742 PANK3Q9H999 370 aa10.91□□□□□ -0.66
NEDD1-201ENST00000266742 PLA2R1Q13018 1463 aa10.91□□□□□ -0.66
NEDD1-201ENST00000266742 PER1O15534 1290 aaPredicted RBP10.91□□□□□ -0.66
NEDD1-201ENST00000266742 ANP32AP39687 249 aaKnown RBP10.91□□□□□ -0.66
NEDD1-201ENST00000266742 SHROOM2Q13796 1616 aa10.91□□□□□ -0.66
NEDD1-201ENST00000266742 RRP1P56182 461 aaKnown RBP10.91□□□□□ -0.66
NEDD1-201ENST00000266742 INSRP06213 1382 aa10.91□□□□□ -0.66
NEDD1-201ENST00000266742 COL17A1Q9UMD9 1497 aaPredicted RBP10.91□□□□□ -0.66
NEDD1-201ENST00000266742 MSH5O43196 834 aa10.9□□□□□ -0.66
NEDD1-201ENST00000266742 CHD1O14646 1710 aa10.9□□□□□ -0.66
NEDD1-201ENST00000266742 LAMC1P11047 1609 aa10.9□□□□□ -0.66
NEDD1-201ENST00000266742 KNSTRNQ9Y448 316 aa10.9□□□□□ -0.66
NEDD1-201ENST00000266742 SALL2Q9Y467 1007 aaPredicted RBP10.9□□□□□ -0.66
NEDD1-201ENST00000266742 KANK1Q14678 1352 aa10.9□□□□□ -0.66
NEDD1-201ENST00000266742 TESK2Q96S53 571 aa10.9□□□□□ -0.67
NEDD1-201ENST00000266742 SENP3-EIF4A1A0A087X0R7 540 aa10.89□□□□□ -0.67
NEDD1-201ENST00000266742 PRDM15P57071 1507 aaPredicted RBP10.89□□□□□ -0.67
NEDD1-201ENST00000266742 E9PCH4 1651 aa10.88□□□□□ -0.67
NEDD1-201ENST00000266742 UHRF1BP1LA0JNW5 1464 aa10.88□□□□□ -0.67
NEDD1-201ENST00000266742 MAGI2Q86UL8 1455 aa10.88□□□□□ -0.67
NEDD1-201ENST00000266742 RTEL1-TNFRSF6BF6WH68 1400 aa10.88□□□□□ -0.67
NEDD1-201ENST00000266742 DISP3Q9P2K9 1392 aa10.87□□□□□ -0.67
NEDD1-201ENST00000266742 WDR43Q15061 677 aaKnown RBP eCLIP10.87□□□□□ -0.67
NEDD1-201ENST00000266742 EIF3AQ14152 1382 aaKnown RBP10.87□□□□□ -0.67
NEDD1-201ENST00000266742 ZMYM4Q5VZL5 1548 aa10.86□□□□□ -0.67
NEDD1-201ENST00000266742 NOP58Q9Y2X3 529 aaKnown RBP10.85□□□□□ -0.67
NEDD1-201ENST00000266742 TCERG1O14776 1098 aaKnown RBP10.85□□□□□ -0.67
NEDD1-201ENST00000266742 ABCC1P33527 1531 aa10.85□□□□□ -0.67
NEDD1-201ENST00000266742 TRAPPC8Q9Y2L5 1435 aa10.84□□□□□ -0.67
NEDD1-201ENST00000266742 AFAP1Q8N556 730 aa10.84□□□□□ -0.67
NEDD1-201ENST00000266742 EXOC6Q8TAG9 804 aa10.83□□□□□ -0.68
NEDD1-201ENST00000266742 ARAP3Q8WWN8 1544 aa10.83□□□□□ -0.68
NEDD1-201ENST00000266742 ZCCHC11Q5TAX3 1644 aaKnown RBP10.82□□□□□ -0.68
NEDD1-201ENST00000266742 ERCC6L2Q5T890 1561 aa10.82□□□□□ -0.68
NEDD1-201ENST00000266742 SCAF11Q99590 1463 aaKnown RBP10.82□□□□□ -0.68
NEDD1-201ENST00000266742 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.82□□□□□ -0.68
NEDD1-201ENST00000266742 ZBTB47Q9UFB7 747 aaPredicted RBP10.82□□□□□ -0.68
NEDD1-201ENST00000266742 BLMP54132 1417 aaPredicted RBP10.82□□□□□ -0.68
NEDD1-201ENST00000266742 KIF3BO15066 747 aa10.81□□□□□ -0.68
NEDD1-201ENST00000266742 IPO9Q96P70 1041 aaKnown RBP10.81□□□□□ -0.68
NEDD1-201ENST00000266742 SCAPERQ9BY12 1400 aa10.81□□□□□ -0.68
NEDD1-201ENST00000266742 TRPM2O94759 1503 aa10.8□□□□□ -0.68
NEDD1-201ENST00000266742 MS4A1P11836 297 aa10.8□□□□□ -0.68
NEDD1-201ENST00000266742 CDCA7LQ96GN5 454 aa10.8□□□□□ -0.68
NEDD1-201ENST00000266742 PPP2R1AP30153 589 aa10.8□□□□□ -0.68
NEDD1-201ENST00000266742 PTPRTO14522 1441 aa10.8□□□□□ -0.68
NEDD1-201ENST00000266742 ADAMTS8Q9UP79 889 aa10.79□□□□□ -0.68
NEDD1-201ENST00000266742 FANCAO15360 1455 aa10.78□□□□□ -0.68
NEDD1-201ENST00000266742 RNF17Q9BXT8 1623 aaKnown RBP10.78□□□□□ -0.68
NEDD1-201ENST00000266742 GOLGA2Q08379 1002 aa10.78□□□□□ -0.68
NEDD1-201ENST00000266742 CLASP1Q7Z460 1538 aa10.78□□□□□ -0.68
NEDD1-201ENST00000266742 WDR7Q9Y4E6 1490 aa10.77□□□□□ -0.68
NEDD1-201ENST00000266742 NPC1L1Q9UHC9 1359 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms