RNA–Protein interactions for RNA: ENST00000262519.13

SETD1A-201, Transcript of SET domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SETD1A, Length 6,451 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD1A-201ENST00000262519 FOSBP53539 338 aa17.29■□□□□ 0.36
SETD1A-201ENST00000262519 RCAN3Q9UKA8 241 aa17.29■□□□□ 0.36
SETD1A-201ENST00000262519 RRP7AQ9Y3A4 280 aaKnown RBP17.29■□□□□ 0.36
SETD1A-201ENST00000262519 SYTL4Q96C24 671 aaPredicted RBP17.28■□□□□ 0.36
SETD1A-201ENST00000262519 KTN1Q86UP2 1357 aaKnown RBP17.28■□□□□ 0.36
SETD1A-201ENST00000262519 AKAP17AQ02040 695 aaKnown RBP17.28■□□□□ 0.36
SETD1A-201ENST00000262519 NECTIN2Q92692 538 aa17.28■□□□□ 0.36
SETD1A-201ENST00000262519 TSR1Q2NL82 804 aaKnown RBP17.27■□□□□ 0.36
SETD1A-201ENST00000262519 PHF23Q9BUL5 403 aaPredicted RBP17.27■□□□□ 0.36
SETD1A-201ENST00000262519 EVA1CP58658 441 aa17.27■□□□□ 0.36
SETD1A-201ENST00000262519 FAM184AQ8NB25 1140 aa17.26■□□□□ 0.35
SETD1A-201ENST00000262519 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.26■□□□□ 0.351e-6■■■■■ 123.6
SETD1A-201ENST00000262519 KDM4AO75164 1064 aa17.25■□□□□ 0.35
SETD1A-201ENST00000262519 PTMSP20962 102 aa17.25■□□□□ 0.35
SETD1A-201ENST00000262519 HMMRO75330 724 aa17.25■□□□□ 0.35
SETD1A-201ENST00000262519 SETQ01105 290 aaPredicted RBP17.24■□□□□ 0.35
SETD1A-201ENST00000262519 PKD2Q13563 968 aa17.24■□□□□ 0.35
SETD1A-201ENST00000262519 MEX3CQ5U5Q3 659 aaKnown RBP17.24■□□□□ 0.35
SETD1A-201ENST00000262519 CSPP1Q1MSJ5 1256 aa17.24■□□□□ 0.35
SETD1A-201ENST00000262519 CEP162Q5TB80 1403 aa17.24■□□□□ 0.35
SETD1A-201ENST00000262519 SLC4A3P48751 1232 aa17.23■□□□□ 0.35
SETD1A-201ENST00000262519 BCL2L13Q9BXK5 485 aa17.23■□□□□ 0.35
SETD1A-201ENST00000262519 ROCK2O75116 1388 aaKnown RBP17.23■□□□□ 0.35
SETD1A-201ENST00000262519 APPP05067 770 aa17.23■□□□□ 0.35
SETD1A-201ENST00000262519 MTMR7Q9Y216 660 aa17.22■□□□□ 0.35
SETD1A-201ENST00000262519 TPM2P07951 284 aa17.22■□□□□ 0.35
SETD1A-201ENST00000262519 EIF2S2P20042 333 aaKnown RBP17.21■□□□□ 0.35
SETD1A-201ENST00000262519 PMFBP1Q8TBY8 1022 aa17.21■□□□□ 0.35
SETD1A-201ENST00000262519 FYB1O15117 783 aa17.2■□□□□ 0.34
SETD1A-201ENST00000262519 NOL10Q9BSC4 688 aaKnown RBP17.2■□□□□ 0.34
SETD1A-201ENST00000262519 GOLGA6L19H0YKK7 550 aa17.19■□□□□ 0.34
SETD1A-201ENST00000262519 BECN2A8MW95 431 aa17.18■□□□□ 0.34
SETD1A-201ENST00000262519 SYNE3Q6ZMZ3 975 aa17.18■□□□□ 0.34
SETD1A-201ENST00000262519 TCERG1O14776 1098 aaKnown RBP17.17■□□□□ 0.34
SETD1A-201ENST00000262519 ST18O60284 1047 aa17.17■□□□□ 0.34
SETD1A-201ENST00000262519 VPS37DQ86XT2 251 aa17.17■□□□□ 0.34
SETD1A-201ENST00000262519 GOLGA3Q08378 1498 aa17.17■□□□□ 0.34
SETD1A-201ENST00000262519 CCDC43Q96MW1 224 aaKnown RBP17.16■□□□□ 0.34
SETD1A-201ENST00000262519 NAP1L1P55209 391 aaKnown RBP17.16■□□□□ 0.34
SETD1A-201ENST00000262519 ANKRD45Q5TZF3 282 aa17.16■□□□□ 0.34
SETD1A-201ENST00000262519 EID1Q9Y6B2 187 aa17.16■□□□□ 0.34
SETD1A-201ENST00000262519 AMOTL1Q8IY63 956 aa17.15■□□□□ 0.34
SETD1A-201ENST00000262519 TPM1P09493 284 aa17.15■□□□□ 0.34
SETD1A-201ENST00000262519 SKIDA1Q1XH10 827 aa17.15■□□□□ 0.34
SETD1A-201ENST00000262519 C1orf141Q5JVX7 400 aa17.14■□□□□ 0.33
SETD1A-201ENST00000262519 ZFYVE27Q5T4F4 411 aa17.14■□□□□ 0.33
SETD1A-201ENST00000262519 PHF14O94880 888 aa17.14■□□□□ 0.33
SETD1A-201ENST00000262519 ZNF771Q7L3S4 317 aaPredicted RBP17.13■□□□□ 0.33
SETD1A-201ENST00000262519 RRP12Q5JTH9 1297 aaKnown RBP17.13■□□□□ 0.33
SETD1A-201ENST00000262519 CENPJQ9HC77 1338 aaPredicted RBP17.13■□□□□ 0.33
SETD1A-201ENST00000262519 TRAK1Q9UPV9 953 aa17.12■□□□□ 0.33
SETD1A-201ENST00000262519 TRIM29Q14134 588 aa17.12■□□□□ 0.33
SETD1A-201ENST00000262519 CCDC70Q6NSX1 233 aa17.12■□□□□ 0.33
SETD1A-201ENST00000262519 NFXL1Q6ZNB6 911 aa17.12■□□□□ 0.33
SETD1A-201ENST00000262519 KIF3AQ9Y496 699 aa17.12■□□□□ 0.33
SETD1A-201ENST00000262519 ANO2Q9NQ90 1003 aa17.12■□□□□ 0.33
SETD1A-201ENST00000262519 CT47A1Q5JQC4 288 aaPredicted RBP17.11■□□□□ 0.33
SETD1A-201ENST00000262519 USP35Q9P2H5 1018 aa17.11■□□□□ 0.33
SETD1A-201ENST00000262519 KIF3BO15066 747 aa17.11■□□□□ 0.33
SETD1A-201ENST00000262519 PAF1Q8N7H5 531 aa17.11■□□□□ 0.33
SETD1A-201ENST00000262519 DDX49Q9Y6V7 483 aaKnown RBP17.11■□□□□ 0.33
SETD1A-201ENST00000262519 TERF2IPQ9NYB0 399 aa17.1■□□□□ 0.33
SETD1A-201ENST00000262519 PLIN1O60240 522 aa17.1■□□□□ 0.33
SETD1A-201ENST00000262519 AEBP2Q6ZN18 517 aaPredicted RBP17.1■□□□□ 0.33
SETD1A-201ENST00000262519 HDAC5Q9UQL6 1122 aa17.1■□□□□ 0.33
SETD1A-201ENST00000262519 DIAPH3Q9NSV4 1193 aa17.09■□□□□ 0.33
SETD1A-201ENST00000262519 PPP1R1BQ9UD71 204 aaPredicted RBP17.09■□□□□ 0.33
SETD1A-201ENST00000262519 CALRP27797 417 aaKnown RBP17.09■□□□□ 0.33
SETD1A-201ENST00000262519 TTC5Q8N0Z6 440 aa17.09■□□□□ 0.33
SETD1A-201ENST00000262519 ODF2Q5BJF6 829 aa17.08■□□□□ 0.33
SETD1A-201ENST00000262519 HOMER1Q86YM7 354 aa17.08■□□□□ 0.33
SETD1A-201ENST00000262519 C9orf78Q9NZ63 289 aaPredicted RBP17.07■□□□□ 0.32
SETD1A-201ENST00000262519 TTLL5Q6EMB2 1281 aa17.07■□□□□ 0.32
SETD1A-201ENST00000262519 CPLX1O14810 134 aa17.06■□□□□ 0.32
SETD1A-201ENST00000262519 FAM177BA6PVY3 158 aa17.06■□□□□ 0.32
SETD1A-201ENST00000262519 TMEM132AQ24JP5 1023 aa17.06■□□□□ 0.32
SETD1A-201ENST00000262519 CCDC27Q2M243 656 aa17.06■□□□□ 0.32
SETD1A-201ENST00000262519 IPO7O95373 1038 aaKnown RBP17.05■□□□□ 0.32
SETD1A-201ENST00000262519 HSP90AA2PQ14568 343 aaPredicted RBP17.05■□□□□ 0.32
SETD1A-201ENST00000262519 BICD2Q8TD16 824 aa17.05■□□□□ 0.32
SETD1A-201ENST00000262519 DHX37Q8IY37 1157 aaKnown RBP17.05■□□□□ 0.32
SETD1A-201ENST00000262519 TEFQ10587 303 aa17.04■□□□□ 0.32
SETD1A-201ENST00000262519 CHMP4AQ9BY43 222 aa17.04■□□□□ 0.32
SETD1A-201ENST00000262519 IKQ13123 557 aaPredicted RBP17.04■□□□□ 0.32
SETD1A-201ENST00000262519 CCDC47Q96A33 483 aaKnown RBP17.04■□□□□ 0.32
SETD1A-201ENST00000262519 HSP90AB2PQ58FF8 381 aa17.03■□□□□ 0.32
SETD1A-201ENST00000262519 ZNF428Q96B54 188 aa17.03■□□□□ 0.32
SETD1A-201ENST00000262519 NUP155O75694 1391 aa17.03■□□□□ 0.32
SETD1A-201ENST00000262519 HNRNPMP52272 730 aaKnown RBP eCLIP17.02■□□□□ 0.327e-7■■■■□ 23.6
SETD1A-201ENST00000262519 GPS2Q13227 327 aa17.02■□□□□ 0.32
SETD1A-201ENST00000262519 RBM33Q96EV2 1170 aaKnown RBP17.02■□□□□ 0.32
SETD1A-201ENST00000262519 IPO9Q96P70 1041 aaKnown RBP17.02■□□□□ 0.32
SETD1A-201ENST00000262519 WASHC2CQ9Y4E1 1318 aa17.02■□□□□ 0.32
SETD1A-201ENST00000262519 LMOD3Q0VAK6 560 aa17.02■□□□□ 0.32
SETD1A-201ENST00000262519 R3HCC1Q9Y3T6 440 aaKnown RBP17.02■□□□□ 0.32
SETD1A-201ENST00000262519 KIF27Q86VH2 1401 aa17.02■□□□□ 0.31
SETD1A-201ENST00000262519 VPS37CA5D8V6 355 aaPredicted RBP17.01■□□□□ 0.31
SETD1A-201ENST00000262519 IFIT2P09913 472 aaKnown RBP17.01■□□□□ 0.31
SETD1A-201ENST00000262519 IBSPP21815 317 aaPredicted RBP17.01■□□□□ 0.31
SETD1A-201ENST00000262519 RALBP1Q15311 655 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms