RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 FOXD4L4Q8WXT5 416 aaPredicted RBP12.95□□□□□ -0.34
PALB2-201ENST00000261584 ITPRIPQ8IWB1 547 aa12.94□□□□□ -0.34
PALB2-201ENST00000261584 ANP32BQ92688 251 aaKnown RBP12.94□□□□□ -0.34
PALB2-201ENST00000261584 HSP90AB1P08238 724 aaKnown RBP12.93□□□□□ -0.34
PALB2-201ENST00000261584 SMG6Q86US8 1419 aaKnown RBP12.93□□□□□ -0.34
PALB2-201ENST00000261584 CENPQQ7L2Z9 268 aaPredicted RBP12.93□□□□□ -0.34
PALB2-201ENST00000261584 TRAK1Q9UPV9 953 aa12.93□□□□□ -0.34
PALB2-201ENST00000261584 CC2D2AQ9P2K1 1620 aa12.93□□□□□ -0.34
PALB2-201ENST00000261584 ANKRD30AQ9BXX3 1397 aa12.92□□□□□ -0.34
PALB2-201ENST00000261584 FOXD4L6Q3SYB3 417 aaPredicted RBP12.92□□□□□ -0.34
PALB2-201ENST00000261584 FOXD4L3Q6VB84 417 aaPredicted RBP12.92□□□□□ -0.34
PALB2-201ENST00000261584 PNNQ9H307 717 aaKnown RBP12.92□□□□□ -0.34
PALB2-201ENST00000261584 USP35Q9P2H5 1018 aa12.91□□□□□ -0.34
PALB2-201ENST00000261584 PDE3BQ13370 1112 aa12.91□□□□□ -0.34
PALB2-201ENST00000261584 CENPJQ9HC77 1338 aaPredicted RBP12.91□□□□□ -0.34
PALB2-201ENST00000261584 VSIG10Q8N0Z9 540 aa12.91□□□□□ -0.34
PALB2-201ENST00000261584 CDK13Q14004 1512 aaKnown RBP12.9□□□□□ -0.34
PALB2-201ENST00000261584 PLCB2Q00722 1185 aa12.9□□□□□ -0.34
PALB2-201ENST00000261584 MS4A1P11836 297 aa12.9□□□□□ -0.35
PALB2-201ENST00000261584 NOL8Q76FK4 1167 aaKnown RBP12.89□□□□□ -0.35
PALB2-201ENST00000261584 STAG3Q9UJ98 1225 aa12.89□□□□□ -0.35
PALB2-201ENST00000261584 GLIPR1L2Q4G1C9 344 aa12.88□□□□□ -0.35
PALB2-201ENST00000261584 GOLGA6L3A6NEY3 463 aa12.88□□□□□ -0.35
PALB2-201ENST00000261584 GGT6Q6P531 493 aa12.88□□□□□ -0.35
PALB2-201ENST00000261584 NCOA1Q15788 1441 aa12.88□□□□□ -0.35
PALB2-201ENST00000261584 SMC4Q9NTJ3 1288 aa12.88□□□□□ -0.35
PALB2-201ENST00000261584 HSCBQ8IWL3 235 aa12.87□□□□□ -0.35
PALB2-201ENST00000261584 ANKRD30BQ9BXX2 1392 aa12.87□□□□□ -0.35
PALB2-201ENST00000261584 PRG4Q92954 1404 aaPredicted RBP12.87□□□□□ -0.35
PALB2-201ENST00000261584 JPH4Q96JJ6 628 aa12.87□□□□□ -0.35
PALB2-201ENST00000261584 PPP2R1AP30153 589 aa12.85□□□□□ -0.35
PALB2-201ENST00000261584 FYCO1Q9BQS8 1478 aa12.85□□□□□ -0.35
PALB2-201ENST00000261584 CFAP53Q96M91 514 aa12.85□□□□□ -0.35
PALB2-201ENST00000261584 MAPK8IP3Q9UPT6 1336 aa12.85□□□□□ -0.35
PALB2-201ENST00000261584 SRPK2P78362 688 aaKnown RBP12.84□□□□□ -0.35
PALB2-201ENST00000261584 CDCA8Q53HL2 280 aa12.84□□□□□ -0.35
PALB2-201ENST00000261584 TNNQ9UQP3 1299 aa12.84□□□□□ -0.35
PALB2-201ENST00000261584 GAPVD1Q14C86 1478 aa12.84□□□□□ -0.35
PALB2-201ENST00000261584 CCDC144AA2RUR9 1427 aa12.84□□□□□ -0.35
PALB2-201ENST00000261584 KIF3BO15066 747 aa12.84□□□□□ -0.35
PALB2-201ENST00000261584 TAOK2Q9UL54 1235 aa12.84□□□□□ -0.35
PALB2-201ENST00000261584 TMEM132EQ6IEE7 984 aa12.83□□□□□ -0.36
PALB2-201ENST00000261584 MPNDQ8N594 471 aa12.83□□□□□ -0.36
PALB2-201ENST00000261584 TSR2Q969E8 191 aaKnown RBP12.83□□□□□ -0.36
PALB2-201ENST00000261584 LNPKQ9C0E8 428 aa12.83□□□□□ -0.36
PALB2-201ENST00000261584 SEC24BO95487 1268 aa12.83□□□□□ -0.36
PALB2-201ENST00000261584 ANKRD50Q9ULJ7 1429 aa12.83□□□□□ -0.36
PALB2-201ENST00000261584 BRD4O60885 1362 aaPredicted RBP12.82□□□□□ -0.36
PALB2-201ENST00000261584 IGHDP01880 384 aa12.82□□□□□ -0.36
PALB2-201ENST00000261584 DNTTIP2Q5QJE6 756 aaKnown RBP12.82□□□□□ -0.36
PALB2-201ENST00000261584 AMER1Q5JTC6 1135 aaPredicted RBP12.81□□□□□ -0.36
PALB2-201ENST00000261584 PTMAP06454 111 aaKnown RBP12.8□□□□□ -0.36
PALB2-201ENST00000261584 CFAP70Q5T0N1 1121 aa12.8□□□□□ -0.36
PALB2-201ENST00000261584 L1TD1Q5T7N2 865 aaKnown RBP12.8□□□□□ -0.36
PALB2-201ENST00000261584 RWDD1Q9H446 243 aaPredicted RBP12.8□□□□□ -0.36
PALB2-201ENST00000261584 POLA1P09884 1462 aaPredicted RBP12.8□□□□□ -0.36
PALB2-201ENST00000261584 MYH16Q9H6N6 1097 aa12.8□□□□□ -0.36
PALB2-201ENST00000261584 C1orf115Q9H7X2 142 aa12.8□□□□□ -0.36
PALB2-201ENST00000261584 NUTM2FA1L443 756 aa12.8□□□□□ -0.36
PALB2-201ENST00000261584 SPINK5Q9NQ38 1064 aaPredicted RBP12.79□□□□□ -0.36
PALB2-201ENST00000261584 PDZRN3Q9UPQ7 1066 aa12.79□□□□□ -0.36
PALB2-201ENST00000261584 PTPN23Q9H3S7 1636 aa12.79□□□□□ -0.36
PALB2-201ENST00000261584 BCL11BQ9C0K0 894 aaPredicted RBP12.78□□□□□ -0.36
PALB2-201ENST00000261584 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.78□□□□□ -0.36
PALB2-201ENST00000261584 PANK2Q9BZ23 570 aa12.78□□□□□ -0.36
PALB2-201ENST00000261584 ANKRD45Q5TZF3 282 aa12.78□□□□□ -0.36
PALB2-201ENST00000261584 SLC12A5Q9H2X9 1139 aa12.77□□□□□ -0.36
PALB2-201ENST00000261584 GOLGA6L22H0YM25 854 aa12.77□□□□□ -0.37
PALB2-201ENST00000261584 HSP90AA2PQ14568 343 aaPredicted RBP12.77□□□□□ -0.37
PALB2-201ENST00000261584 TCP11L2Q8N4U5 519 aa12.77□□□□□ -0.37
PALB2-201ENST00000261584 E9PSI1 815 aa12.76□□□□□ -0.37
PALB2-201ENST00000261584 DAPK1P53355 1430 aa12.76□□□□□ -0.37
PALB2-201ENST00000261584 AFAP1Q8N556 730 aa12.75□□□□□ -0.37
PALB2-201ENST00000261584 DUSP27Q5VZP5 1158 aa12.75□□□□□ -0.37
PALB2-201ENST00000261584 DHX29Q7Z478 1369 aaKnown RBP12.75□□□□□ -0.37
PALB2-201ENST00000261584 DMRT2Q9Y5R5 561 aa12.75□□□□□ -0.37
PALB2-201ENST00000261584 MTHFSP49914 203 aa12.74□□□□□ -0.37
PALB2-201ENST00000261584 ABCC5O15440 1437 aa12.74□□□□□ -0.37
PALB2-201ENST00000261584 C22orf23Q9BZE7 217 aa12.74□□□□□ -0.37
PALB2-201ENST00000261584 GGNBP2Q9H3C7 697 aa12.74□□□□□ -0.37
PALB2-201ENST00000261584 MAP3K1Q13233 1512 aa12.74□□□□□ -0.37
PALB2-201ENST00000261584 PMFBP1Q8TBY8 1022 aa12.74□□□□□ -0.37
PALB2-201ENST00000261584 KIAA1107Q9UPP5 1409 aa12.74□□□□□ -0.37
PALB2-201ENST00000261584 C8orf34Q49A92 452 aa12.73□□□□□ -0.37
PALB2-201ENST00000261584 TRAK2O60296 914 aa12.73□□□□□ -0.37
PALB2-201ENST00000261584 DISP3Q9P2K9 1392 aa12.73□□□□□ -0.37
PALB2-201ENST00000261584 RBM10P98175 930 aaKnown RBP12.72□□□□□ -0.37
PALB2-201ENST00000261584 MLECQ14165 292 aa12.72□□□□□ -0.37
PALB2-201ENST00000261584 RSPH6AQ9H0K4 717 aa12.72□□□□□ -0.37
PALB2-201ENST00000261584 MSNP26038 577 aaKnown RBP12.72□□□□□ -0.37
PALB2-201ENST00000261584 ZNF428Q96B54 188 aa12.72□□□□□ -0.37
PALB2-201ENST00000261584 DDX49Q9Y6V7 483 aaKnown RBP12.72□□□□□ -0.37
PALB2-201ENST00000261584 CGNL1Q0VF96 1302 aa12.71□□□□□ -0.37
PALB2-201ENST00000261584 HMOX1P09601 288 aa12.71□□□□□ -0.37
PALB2-201ENST00000261584 RPRD2Q5VT52 1461 aaKnown RBP12.71□□□□□ -0.38
PALB2-201ENST00000261584 TOPBP1Q92547 1522 aa12.7□□□□□ -0.38
PALB2-201ENST00000261584 FBLN1P23142 703 aa12.7□□□□□ -0.38
PALB2-201ENST00000261584 SLFN5Q08AF3 891 aa12.7□□□□□ -0.38
PALB2-201ENST00000261584 SLC4A10Q6U841 1118 aa12.7□□□□□ -0.38
PALB2-201ENST00000261584 C14orf37Q86TY3 774 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms