RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 CARD11Q9BXL7 1154 aa22.86■■□□□ 1.25
CDK4-201ENST00000257904 CDC42BPBQ9Y5S2 1711 aa22.86■■□□□ 1.25
CDK4-201ENST00000257904 NOP58Q9Y2X3 529 aaKnown RBP22.86■■□□□ 1.25
CDK4-201ENST00000257904 KDM5DQ9BY66 1539 aa22.86■■□□□ 1.25
CDK4-201ENST00000257904 NUP155O75694 1391 aa22.85■■□□□ 1.25
CDK4-201ENST00000257904 LRPPRCP42704 1394 aaKnown RBP22.85■■□□□ 1.25
CDK4-201ENST00000257904 PREX2Q70Z35 1606 aa22.85■■□□□ 1.25
CDK4-201ENST00000257904 TTC37Q6PGP7 1564 aa22.85■■□□□ 1.25
CDK4-201ENST00000257904 HNRNPMP52272 730 aaKnown RBP eCLIP22.85■■□□□ 1.25
CDK4-201ENST00000257904 C9orf84Q5VXU9 1444 aa22.83■■□□□ 1.25
CDK4-201ENST00000257904 KTN1Q86UP2 1357 aaKnown RBP22.83■■□□□ 1.25
CDK4-201ENST00000257904 TSPY4P0CV99 314 aa22.82■■□□□ 1.24
CDK4-201ENST00000257904 TSPY10P0CW01 314 aa22.82■■□□□ 1.24
CDK4-201ENST00000257904 BRD4O60885 1362 aaPredicted RBP22.82■■□□□ 1.24
CDK4-201ENST00000257904 SAMD9LQ8IVG5 1584 aa22.81■■□□□ 1.24
CDK4-201ENST00000257904 E9PCH4 1651 aa22.81■■□□□ 1.24
CDK4-201ENST00000257904 MYBBP1AQ9BQG0 1328 aaKnown RBP22.81■■□□□ 1.24
CDK4-201ENST00000257904 ARHGEF5Q12774 1597 aa22.79■■□□□ 1.24
CDK4-201ENST00000257904 ST20-MTHFSA0A0A6YYL1 179 aa22.78■■□□□ 1.24
CDK4-201ENST00000257904 RALBP1Q15311 655 aa22.78■■□□□ 1.24
CDK4-201ENST00000257904 SENP3-EIF4A1A0A087X0R7 540 aa22.78■■□□□ 1.24
CDK4-201ENST00000257904 ARHGAP5Q13017 1502 aa22.77■■□□□ 1.24
CDK4-201ENST00000257904 MYO5CQ9NQX4 1742 aa22.77■■□□□ 1.24
CDK4-201ENST00000257904 PAK3O75914 559 aaPredicted RBP22.77■■□□□ 1.23
CDK4-201ENST00000257904 ANP32AP39687 249 aaKnown RBP22.74■■□□□ 1.23
CDK4-201ENST00000257904 KDM2AQ9Y2K7 1162 aa22.74■■□□□ 1.23
CDK4-201ENST00000257904 CCDC141Q6ZP82 1450 aa22.74■■□□□ 1.23
CDK4-201ENST00000257904 WDR7Q9Y4E6 1490 aa22.73■■□□□ 1.23
CDK4-201ENST00000257904 PLCH2O75038 1416 aa22.73■■□□□ 1.23
CDK4-201ENST00000257904 DCAF11Q8TEB1 546 aa22.72■■□□□ 1.23
CDK4-201ENST00000257904 IPO9Q96P70 1041 aaKnown RBP22.72■■□□□ 1.23
CDK4-201ENST00000257904 DEKP35659 375 aaKnown RBP22.72■■□□□ 1.23
CDK4-201ENST00000257904 RSPH4AQ5TD94 716 aa22.72■■□□□ 1.23
CDK4-201ENST00000257904 SYCP2Q9BX26 1530 aa22.71■■□□□ 1.23
CDK4-201ENST00000257904 RRP1P56182 461 aaKnown RBP22.7■■□□□ 1.23
CDK4-201ENST00000257904 PARD3Q8TEW0 1356 aa22.68■■□□□ 1.22
CDK4-201ENST00000257904 PLEKHH2Q8IVE3 1493 aa22.67■■□□□ 1.22
CDK4-201ENST00000257904 ASXL2Q76L83 1435 aa22.67■■□□□ 1.22
CDK4-201ENST00000257904 TRPM1Q7Z4N2 1603 aa22.66■■□□□ 1.22
CDK4-201ENST00000257904 NLRP13Q86W25 1043 aa22.66■■□□□ 1.22
CDK4-201ENST00000257904 FAM135AQ9P2D6 1515 aa22.66■■□□□ 1.22
CDK4-201ENST00000257904 NBR1Q14596 966 aa22.66■■□□□ 1.22
CDK4-201ENST00000257904 EFCAB2Q5VUJ9 269 aa22.66■■□□□ 1.22
CDK4-201ENST00000257904 PRAG1Q86YV5 1406 aa22.65■■□□□ 1.22
CDK4-201ENST00000257904 NPM1P06748 294 aaKnown RBP eCLIP22.65■■□□□ 1.22
CDK4-201ENST00000257904 RCAN3Q9UKA8 241 aa22.65■■□□□ 1.22
CDK4-201ENST00000257904 PDE3BQ13370 1112 aa22.63■■□□□ 1.21
CDK4-201ENST00000257904 ARAP3Q8WWN8 1544 aa22.63■■□□□ 1.21
CDK4-201ENST00000257904 EXOC6Q8TAG9 804 aa22.62■■□□□ 1.21
CDK4-201ENST00000257904 ZBTB47Q9UFB7 747 aaPredicted RBP22.62■■□□□ 1.21
CDK4-201ENST00000257904 MAST1Q9Y2H9 1570 aa22.61■■□□□ 1.21
CDK4-201ENST00000257904 ABCA9Q8IUA7 1624 aa22.61■■□□□ 1.21
CDK4-201ENST00000257904 CCDC144AA2RUR9 1427 aa22.6■■□□□ 1.21
CDK4-201ENST00000257904 GPRASP1Q5JY77 1395 aa22.59■■□□□ 1.21
CDK4-201ENST00000257904 TCERG1O14776 1098 aaKnown RBP22.58■■□□□ 1.21
CDK4-201ENST00000257904 PER1O15534 1290 aaPredicted RBP22.58■■□□□ 1.21
CDK4-201ENST00000257904 ABCC1P33527 1531 aa22.57■■□□□ 1.2
CDK4-201ENST00000257904 COL17A1Q9UMD9 1497 aaPredicted RBP22.57■■□□□ 1.2
CDK4-201ENST00000257904 LAMC1P11047 1609 aa22.56■■□□□ 1.2
CDK4-201ENST00000257904 SALL2Q9Y467 1007 aaPredicted RBP22.56■■□□□ 1.2
CDK4-201ENST00000257904 INSRP06213 1382 aa22.55■■□□□ 1.2
CDK4-201ENST00000257904 ZMYM4Q5VZL5 1548 aa22.55■■□□□ 1.2
CDK4-201ENST00000257904 WASHC2CQ9Y4E1 1318 aa22.55■■□□□ 1.2
CDK4-201ENST00000257904 NBPF1Q3BBV0 1214 aa22.54■■□□□ 1.2
CDK4-201ENST00000257904 UNC13BO14795 1591 aa22.54■■□□□ 1.2
CDK4-201ENST00000257904 PRDM15P57071 1507 aaPredicted RBP22.54■■□□□ 1.2
CDK4-201ENST00000257904 A2MP01023 1474 aa22.53■■□□□ 1.2
CDK4-201ENST00000257904 BLMP54132 1417 aaPredicted RBP22.53■■□□□ 1.2
CDK4-201ENST00000257904 PLXNC1O60486 1568 aa22.53■■□□□ 1.2
CDK4-201ENST00000257904 PLA2R1Q13018 1463 aa22.53■■□□□ 1.2
CDK4-201ENST00000257904 FANCAO15360 1455 aa22.51■■□□□ 1.19
CDK4-201ENST00000257904 TRAPPC8Q9Y2L5 1435 aa22.51■■□□□ 1.19
CDK4-201ENST00000257904 MS4A1P11836 297 aa22.5■■□□□ 1.19
CDK4-201ENST00000257904 CDCA7LQ96GN5 454 aa22.5■■□□□ 1.19
CDK4-201ENST00000257904 DISP3Q9P2K9 1392 aa22.5■■□□□ 1.19
CDK4-201ENST00000257904 RIMBP3CA6NJZ7 1639 aa22.5■■□□□ 1.19
CDK4-201ENST00000257904 RIMBP3BA6NNM3 1639 aa22.5■■□□□ 1.19
CDK4-201ENST00000257904 RIMBP3Q9UFD9 1639 aa22.5■■□□□ 1.19
CDK4-201ENST00000257904 PDE4AP27815 886 aa22.5■■□□□ 1.19
CDK4-201ENST00000257904 RGL3Q3MIN7 710 aa22.5■■□□□ 1.19
CDK4-201ENST00000257904 RTL5Q5HYW3 569 aaPredicted RBP22.5■■□□□ 1.19
CDK4-201ENST00000257904 TESK2Q96S53 571 aa22.5■■□□□ 1.19
CDK4-201ENST00000257904 CYB5RLQ6IPT4 315 aa22.48■■□□□ 1.19
CDK4-201ENST00000257904 EIF2AK4Q9P2K8 1649 aaKnown RBP22.48■■□□□ 1.19
CDK4-201ENST00000257904 CC2D1BQ5T0F9 858 aaKnown RBP22.47■■□□□ 1.19
CDK4-201ENST00000257904 BACH2Q9BYV9 841 aa22.47■■□□□ 1.19
CDK4-201ENST00000257904 ERBINQ96RT1 1412 aa22.47■■□□□ 1.19
CDK4-201ENST00000257904 DUOX2Q9NRD8 1548 aa22.47■■□□□ 1.19
CDK4-201ENST00000257904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.46■■□□□ 1.19
CDK4-201ENST00000257904 NPM2Q86SE8 214 aaKnown RBP22.46■■□□□ 1.19
CDK4-201ENST00000257904 IQGAP3Q86VI3 1631 aa22.45■■□□□ 1.18
CDK4-201ENST00000257904 PANK3Q9H999 370 aa22.44■■□□□ 1.18
CDK4-201ENST00000257904 AFAP1Q8N556 730 aa22.43■■□□□ 1.18
CDK4-201ENST00000257904 SPAG9O60271 1321 aaKnown RBP22.42■■□□□ 1.18
CDK4-201ENST00000257904 RTEL1-TNFRSF6BF6WH68 1400 aa22.42■■□□□ 1.18
CDK4-201ENST00000257904 CD109Q6YHK3 1445 aa22.41■■□□□ 1.18
CDK4-201ENST00000257904 ADGRL1O94910 1474 aa22.41■■□□□ 1.18
CDK4-201ENST00000257904 TMF1P82094 1093 aa22.41■■□□□ 1.18
CDK4-201ENST00000257904 ATP10AO60312 1499 aa22.41■■□□□ 1.18
CDK4-201ENST00000257904 SCAPERQ9BY12 1400 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms