RNA–Protein interactions for RNA: ENST00000235878.5

GBP3-201, Transcript of guanylate binding protein 3, humanhuman

TSL 2

Gene GBP3, Length 2,062 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-201ENST00000235878 USP47Q96K76 1375 aa10.52□□□□□ -0.72
GBP3-201ENST00000235878 BCORL1Q5H9F3 1711 aa10.52□□□□□ -0.72
GBP3-201ENST00000235878 ARHGEF12Q9NZN5 1544 aa10.52□□□□□ -0.73
GBP3-201ENST00000235878 KDM5CP41229 1560 aa10.52□□□□□ -0.73
GBP3-201ENST00000235878 RALGAPBQ86X10 1494 aa10.52□□□□□ -0.73
GBP3-201ENST00000235878 KIF15Q9NS87 1388 aa10.51□□□□□ -0.73
GBP3-201ENST00000235878 MRS2Q9HD23 443 aa10.51□□□□□ -0.73
GBP3-201ENST00000235878 ZBED9Q6R2W3 1325 aa10.51□□□□□ -0.73
GBP3-201ENST00000235878 CDC42BPBQ9Y5S2 1711 aa10.5□□□□□ -0.73
GBP3-201ENST00000235878 SAMD9LQ8IVG5 1584 aa10.5□□□□□ -0.73
GBP3-201ENST00000235878 CCDC141Q6ZP82 1450 aa10.49□□□□□ -0.73
GBP3-201ENST00000235878 SHROOM2Q13796 1616 aa10.49□□□□□ -0.73
GBP3-201ENST00000235878 PREX2Q70Z35 1606 aa10.49□□□□□ -0.73
GBP3-201ENST00000235878 FAM9BQ8IZU0 186 aa10.48□□□□□ -0.73
GBP3-201ENST00000235878 MAST1Q9Y2H9 1570 aa10.48□□□□□ -0.73
GBP3-201ENST00000235878 ROCK2O75116 1388 aaKnown RBP10.47□□□□□ -0.73
GBP3-201ENST00000235878 FAM135AQ9P2D6 1515 aa10.46□□□□□ -0.74
GBP3-201ENST00000235878 RBM19Q9Y4C8 960 aaKnown RBP10.46□□□□□ -0.74
GBP3-201ENST00000235878 ZNF326Q5BKZ1 582 aaKnown RBP10.45□□□□□ -0.74
GBP3-201ENST00000235878 CARD11Q9BXL7 1154 aa10.45□□□□□ -0.74
GBP3-201ENST00000235878 C1QBPQ07021 282 aaKnown RBP10.45□□□□□ -0.74
GBP3-201ENST00000235878 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.44□□□□□ -0.74
GBP3-201ENST00000235878 PLA2R1Q13018 1463 aa10.44□□□□□ -0.74
GBP3-201ENST00000235878 ST20-MTHFSA0A0A6YYL1 179 aa10.43□□□□□ -0.74
GBP3-201ENST00000235878 DCAF11Q8TEB1 546 aa10.43□□□□□ -0.74
GBP3-201ENST00000235878 PNISRQ8TF01 805 aaKnown RBP10.43□□□□□ -0.74
GBP3-201ENST00000235878 SPINK5Q9NQ38 1064 aaPredicted RBP10.43□□□□□ -0.74
GBP3-201ENST00000235878 PPP4R2Q9NY27 417 aa10.43□□□□□ -0.74
GBP3-201ENST00000235878 CHD1O14646 1710 aa10.43□□□□□ -0.74
GBP3-201ENST00000235878 UNC13BO14795 1591 aa10.43□□□□□ -0.74
GBP3-201ENST00000235878 ABCC2Q92887 1545 aa10.42□□□□□ -0.74
GBP3-201ENST00000235878 PLEKHH2Q8IVE3 1493 aa10.42□□□□□ -0.74
GBP3-201ENST00000235878 TTC37Q6PGP7 1564 aa10.42□□□□□ -0.74
GBP3-201ENST00000235878 SMG6Q86US8 1419 aaKnown RBP10.42□□□□□ -0.74
GBP3-201ENST00000235878 KTN1Q86UP2 1357 aaKnown RBP10.42□□□□□ -0.74
GBP3-201ENST00000235878 IRX6P78412 446 aaPredicted RBP10.42□□□□□ -0.74
GBP3-201ENST00000235878 ZNF219Q9P2Y4 722 aaPredicted RBP10.42□□□□□ -0.74
GBP3-201ENST00000235878 KDM2AQ9Y2K7 1162 aa10.42□□□□□ -0.74
GBP3-201ENST00000235878 SYCP2Q9BX26 1530 aa10.41□□□□□ -0.74
GBP3-201ENST00000235878 PRAG1Q86YV5 1406 aa10.41□□□□□ -0.74
GBP3-201ENST00000235878 RNF123Q5XPI4 1314 aa10.41□□□□□ -0.74
GBP3-201ENST00000235878 PLXNC1O60486 1568 aa10.41□□□□□ -0.74
GBP3-201ENST00000235878 ATP10AO60312 1499 aa10.41□□□□□ -0.74
GBP3-201ENST00000235878 GPRASP1Q5JY77 1395 aa10.41□□□□□ -0.74
GBP3-201ENST00000235878 ERCC6L2Q5T890 1561 aa10.4□□□□□ -0.74
GBP3-201ENST00000235878 ARHGAP5Q13017 1502 aa10.4□□□□□ -0.74
GBP3-201ENST00000235878 PLCH2O75038 1416 aa10.4□□□□□ -0.75
GBP3-201ENST00000235878 TRPM1Q7Z4N2 1603 aa10.39□□□□□ -0.75
GBP3-201ENST00000235878 LRPPRCP42704 1394 aaKnown RBP10.39□□□□□ -0.75
GBP3-201ENST00000235878 CCDC144AA2RUR9 1427 aa10.39□□□□□ -0.75
GBP3-201ENST00000235878 RALBP1Q15311 655 aa10.39□□□□□ -0.75
GBP3-201ENST00000235878 IQGAP3Q86VI3 1631 aa10.39□□□□□ -0.75
GBP3-201ENST00000235878 MAGI2Q86UL8 1455 aa10.39□□□□□ -0.75
GBP3-201ENST00000235878 ANP32EQ9BTT0 268 aa10.38□□□□□ -0.75
GBP3-201ENST00000235878 UHRF1BP1LA0JNW5 1464 aa10.38□□□□□ -0.75
GBP3-201ENST00000235878 E9PCH4 1651 aa10.38□□□□□ -0.75
GBP3-201ENST00000235878 BRD4O60885 1362 aaPredicted RBP10.38□□□□□ -0.75
GBP3-201ENST00000235878 POLR3GLQ9BT43 218 aa10.38□□□□□ -0.75
GBP3-201ENST00000235878 DUOX2Q9NRD8 1548 aa10.38□□□□□ -0.75
GBP3-201ENST00000235878 A2MP01023 1474 aa10.37□□□□□ -0.75
GBP3-201ENST00000235878 PER1O15534 1290 aaPredicted RBP10.37□□□□□ -0.75
GBP3-201ENST00000235878 NUDCQ9Y266 331 aa10.37□□□□□ -0.75
GBP3-201ENST00000235878 LAMC1P11047 1609 aa10.37□□□□□ -0.75
GBP3-201ENST00000235878 MYO5CQ9NQX4 1742 aa10.37□□□□□ -0.75
GBP3-201ENST00000235878 NBPF1Q3BBV0 1214 aa10.37□□□□□ -0.75
GBP3-201ENST00000235878 ERBINQ96RT1 1412 aa10.36□□□□□ -0.75
GBP3-201ENST00000235878 MYBBP1AQ9BQG0 1328 aaKnown RBP10.36□□□□□ -0.75
GBP3-201ENST00000235878 TRHP20396 242 aaPredicted RBP10.35□□□□□ -0.75
GBP3-201ENST00000235878 EFCAB2Q5VUJ9 269 aa10.35□□□□□ -0.75
GBP3-201ENST00000235878 TMC1Q8TDI8 760 aa10.35□□□□□ -0.75
GBP3-201ENST00000235878 TESK2Q96S53 571 aa10.35□□□□□ -0.75
GBP3-201ENST00000235878 CAPN15O75808 1086 aa10.35□□□□□ -0.75
GBP3-201ENST00000235878 PRDM15P57071 1507 aaPredicted RBP10.35□□□□□ -0.75
GBP3-201ENST00000235878 CLASP1Q7Z460 1538 aa10.35□□□□□ -0.75
GBP3-201ENST00000235878 RGL3Q3MIN7 710 aa10.34□□□□□ -0.75
GBP3-201ENST00000235878 PARD3Q8TEW0 1356 aa10.34□□□□□ -0.75
GBP3-201ENST00000235878 FANCIQ9NVI1 1328 aa10.34□□□□□ -0.75
GBP3-201ENST00000235878 WASHC2CQ9Y4E1 1318 aa10.34□□□□□ -0.75
GBP3-201ENST00000235878 ZCCHC11Q5TAX3 1644 aaKnown RBP10.33□□□□□ -0.76
GBP3-201ENST00000235878 ABCC1P33527 1531 aa10.33□□□□□ -0.76
GBP3-201ENST00000235878 RTEL1-TNFRSF6BF6WH68 1400 aa10.32□□□□□ -0.76
GBP3-201ENST00000235878 TRAPPC8Q9Y2L5 1435 aa10.32□□□□□ -0.76
GBP3-201ENST00000235878 COL17A1Q9UMD9 1497 aaPredicted RBP10.32□□□□□ -0.76
GBP3-201ENST00000235878 B4GALNT3Q6L9W6 998 aa10.32□□□□□ -0.76
GBP3-201ENST00000235878 ARAP3Q8WWN8 1544 aa10.32□□□□□ -0.76
GBP3-201ENST00000235878 CNGB1Q14028 1251 aaPredicted RBP10.31□□□□□ -0.76
GBP3-201ENST00000235878 NLRP13Q86W25 1043 aa10.31□□□□□ -0.76
GBP3-201ENST00000235878 EIF2AK4Q9P2K8 1649 aaKnown RBP10.31□□□□□ -0.76
GBP3-201ENST00000235878 INSRP06213 1382 aa10.31□□□□□ -0.76
GBP3-201ENST00000235878 DISP3Q9P2K9 1392 aa10.3□□□□□ -0.76
GBP3-201ENST00000235878 STAC3Q96MF2 364 aa10.29□□□□□ -0.76
GBP3-201ENST00000235878 PTPRTO14522 1441 aa10.29□□□□□ -0.76
GBP3-201ENST00000235878 ZMYM4Q5VZL5 1548 aa10.27□□□□□ -0.76
GBP3-201ENST00000235878 RNF17Q9BXT8 1623 aaKnown RBP10.27□□□□□ -0.76
GBP3-201ENST00000235878 SPAG9O60271 1321 aaKnown RBP10.27□□□□□ -0.77
GBP3-201ENST00000235878 TMF1P82094 1093 aa10.27□□□□□ -0.77
GBP3-201ENST00000235878 PDE3BQ13370 1112 aa10.27□□□□□ -0.77
GBP3-201ENST00000235878 AFAP1Q8N556 730 aa10.27□□□□□ -0.77
GBP3-201ENST00000235878 PANK3Q9H999 370 aa10.27□□□□□ -0.77
GBP3-201ENST00000235878 DEPDC5O75140 1603 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms