RNA–Protein interactions for RNA: ENSMUST00000222544.1

Trim27-206, Transcript of Zinc finger protein RFP, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Trim27, Length 4,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-206ENSMUST00000222544 KnstrnQ9D9Z1 312 aaKnown RBP17.41■□□□□ 0.38
Trim27-206ENSMUST00000222544 Rad54l2Q99NG0 1466 aa17.4■□□□□ 0.38
Trim27-206ENSMUST00000222544 Prkrip1Q9CWV6 186 aaKnown RBP17.4■□□□□ 0.38
Trim27-206ENSMUST00000222544 Top2bQ64511 1612 aa17.39■□□□□ 0.38
Trim27-206ENSMUST00000222544 AqrQ8CFQ3 1481 aaKnown RBP17.39■□□□□ 0.37
Trim27-206ENSMUST00000222544 Tiam1Q60610 1591 aa17.39■□□□□ 0.37
Trim27-206ENSMUST00000222544 Dhx9O70133 1380 aaKnown RBP17.37■□□□□ 0.37
Trim27-206ENSMUST00000222544 Pank1Q8K4K6 548 aa17.37■□□□□ 0.37
Trim27-206ENSMUST00000222544 Birc3O08863 600 aa17.37■□□□□ 0.37
Trim27-206ENSMUST00000222544 Kif7B7ZNG0 1348 aa17.37■□□□□ 0.37
Trim27-206ENSMUST00000222544 Hsp90b1P08113 802 aaKnown RBP17.36■□□□□ 0.37
Trim27-206ENSMUST00000222544 Fam184bQ0KK56 942 aa17.36■□□□□ 0.37
Trim27-206ENSMUST00000222544 Mre11Q61216 706 aa17.36■□□□□ 0.37
Trim27-206ENSMUST00000222544 KarsQ99MN1 595 aaKnown RBP17.36■□□□□ 0.37
Trim27-206ENSMUST00000222544 Iqcf3Q9D498 203 aa17.36■□□□□ 0.37
Trim27-206ENSMUST00000222544 Znf316Q6PGE4 1016 aa17.34■□□□□ 0.37
Trim27-206ENSMUST00000222544 Ccdc30Q8BVF4 654 aa17.34■□□□□ 0.37
Trim27-206ENSMUST00000222544 CatipB9EKE5 520 aa17.34■□□□□ 0.37
Trim27-206ENSMUST00000222544 Ift140E9PY46 1464 aa17.33■□□□□ 0.36
Trim27-206ENSMUST00000222544 Pibf1E9Q6K3 756 aa17.33■□□□□ 0.36
Trim27-206ENSMUST00000222544 Rfx1P48377 963 aa17.33■□□□□ 0.36
Trim27-206ENSMUST00000222544 Tsen2Q6P7W5 460 aa17.31■□□□□ 0.36
Trim27-206ENSMUST00000222544 Cc2d2bA0A286YDU8 1405 aa17.31■□□□□ 0.36
Trim27-206ENSMUST00000222544 Txndc2Q6P902 515 aa17.31■□□□□ 0.36
Trim27-206ENSMUST00000222544 Mroh2bQ7M6Y6 1581 aa17.3■□□□□ 0.36
Trim27-206ENSMUST00000222544 Kif16bB1AVY7 1312 aa17.3■□□□□ 0.36
Trim27-206ENSMUST00000222544 Ttll5Q8CHB8 1328 aa17.3■□□□□ 0.36
Trim27-206ENSMUST00000222544 Casc1Q6TDU8 730 aa17.29■□□□□ 0.36
Trim27-206ENSMUST00000222544 Jph4Q80WT0 628 aa17.29■□□□□ 0.36
Trim27-206ENSMUST00000222544 NrkQ9R0G8 1455 aa17.29■□□□□ 0.36
Trim27-206ENSMUST00000222544 Efcab5A0JP43 1406 aa17.28■□□□□ 0.36
Trim27-206ENSMUST00000222544 Ccar1Q8CH18 1146 aaKnown RBP17.28■□□□□ 0.36
Trim27-206ENSMUST00000222544 Ccdc60Q8C4J0 545 aa17.28■□□□□ 0.36
Trim27-206ENSMUST00000222544 Ccdc146E9Q9F7 977 aa17.28■□□□□ 0.36
Trim27-206ENSMUST00000222544 Liat1Q810M6 228 aa17.28■□□□□ 0.36
Trim27-206ENSMUST00000222544 Usp40Q8BWR4 1235 aa17.27■□□□□ 0.36
Trim27-206ENSMUST00000222544 Ccdc183A2AJB1 534 aa17.27■□□□□ 0.35
Trim27-206ENSMUST00000222544 Dhx57Q6P5D3 1388 aaKnown RBP17.27■□□□□ 0.35
Trim27-206ENSMUST00000222544 Rtn4Q99P72 1162 aaKnown RBP17.26■□□□□ 0.35
Trim27-206ENSMUST00000222544 Soga1E1U8D0 1418 aa17.26■□□□□ 0.35
Trim27-206ENSMUST00000222544 Cux1P53564 1515 aa17.26■□□□□ 0.35
Trim27-206ENSMUST00000222544 Map3k1P53349 1493 aa17.25■□□□□ 0.35
Trim27-206ENSMUST00000222544 Psme1P97371 249 aa17.25■□□□□ 0.35
Trim27-206ENSMUST00000222544 Pcmtd1P59913 357 aa17.24■□□□□ 0.35
Trim27-206ENSMUST00000222544 Ylpm1Q9R0I7 1386 aaKnown RBP17.24■□□□□ 0.35
Trim27-206ENSMUST00000222544 Chmp4bQ9D8B3 224 aaKnown RBP17.23■□□□□ 0.35
Trim27-206ENSMUST00000222544 GsdmaQ9EST1 446 aa17.23■□□□□ 0.35
Trim27-206ENSMUST00000222544 Grin2bQ01097 1482 aa17.23■□□□□ 0.35
Trim27-206ENSMUST00000222544 Gm7298A0A0N4SVU1 1476 aa17.23■□□□□ 0.35
Trim27-206ENSMUST00000222544 TchhA0A0B4J1F9 1599 aa17.22■□□□□ 0.35
Trim27-206ENSMUST00000222544 Spag9Q58A65 1321 aaKnown RBP17.22■□□□□ 0.35
Trim27-206ENSMUST00000222544 Naip2Q9QUK4 1447 aa17.22■□□□□ 0.35
Trim27-206ENSMUST00000222544 Duox2A2AQ99 1517 aa17.22■□□□□ 0.35
Trim27-206ENSMUST00000222544 Nutm1Q8BHP2 1126 aa17.22■□□□□ 0.35
Trim27-206ENSMUST00000222544 Trim58Q5NCC9 485 aa17.21■□□□□ 0.35
Trim27-206ENSMUST00000222544 BicraF8VPZ9 1578 aa17.21■□□□□ 0.35
Trim27-206ENSMUST00000222544 Ralbp1Q62172 648 aa17.2■□□□□ 0.34
Trim27-206ENSMUST00000222544 Ppp2r1aQ76MZ3 589 aa17.2■□□□□ 0.34
Trim27-206ENSMUST00000222544 Pknox2Q8BG99 474 aa17.2■□□□□ 0.34
Trim27-206ENSMUST00000222544 Tnnt1O88346 262 aa17.2■□□□□ 0.34
Trim27-206ENSMUST00000222544 Pcf11G3X9Z4 1553 aa17.2■□□□□ 0.34
Trim27-206ENSMUST00000222544 Plekhg5Q66T02 1073 aa17.2■□□□□ 0.34
Trim27-206ENSMUST00000222544 A2mQ6GQT1 1474 aa17.19■□□□□ 0.34
Trim27-206ENSMUST00000222544 HnrnpuQ8VEK3 800 aaKnown RBP17.19■□□□□ 0.34
Trim27-206ENSMUST00000222544 Sox12Q04890 314 aa17.18■□□□□ 0.34
Trim27-206ENSMUST00000222544 Naip5Q9R016 1403 aa17.18■□□□□ 0.34
Trim27-206ENSMUST00000222544 Nectin2P32507 530 aa17.18■□□□□ 0.34
Trim27-206ENSMUST00000222544 Ggt6Q6PDE7 497 aa17.17■□□□□ 0.34
Trim27-206ENSMUST00000222544 Tnpo1Q8BFY9 898 aaKnown RBP17.17■□□□□ 0.34
Trim27-206ENSMUST00000222544 Cc2d1aQ8K1A6 943 aa17.17■□□□□ 0.34
Trim27-206ENSMUST00000222544 Chmp4cQ9D7F7 232 aa17.17■□□□□ 0.34
Trim27-206ENSMUST00000222544 IbspQ61711 324 aa17.17■□□□□ 0.34
Trim27-206ENSMUST00000222544 Stk11ipQ3TAA7 1072 aa17.16■□□□□ 0.34
Trim27-206ENSMUST00000222544 Plekhh1Q80TI1 1356 aa17.16■□□□□ 0.34
Trim27-206ENSMUST00000222544 3425401B19RikD3Z1D3 1412 aa17.16■□□□□ 0.34
Trim27-206ENSMUST00000222544 Apaf1O88879 1249 aa17.15■□□□□ 0.34
Trim27-206ENSMUST00000222544 Znf692Q3U381 531 aa17.15■□□□□ 0.34
Trim27-206ENSMUST00000222544 Urb2E9Q7L1 1524 aaKnown RBP17.15■□□□□ 0.34
Trim27-206ENSMUST00000222544 Rrp12Q6P5B0 1295 aaKnown RBP17.15■□□□□ 0.34
Trim27-206ENSMUST00000222544 G3bp1P97855 465 aaKnown RBP17.13■□□□□ 0.33
Trim27-206ENSMUST00000222544 Tspyl2Q7TQI8 677 aa17.13■□□□□ 0.33
Trim27-206ENSMUST00000222544 Myom3A2ABU4 1439 aa17.13■□□□□ 0.33
Trim27-206ENSMUST00000222544 Rabep1O35551 862 aa17.12■□□□□ 0.33
Trim27-206ENSMUST00000222544 Rsph3aQ3UFY4 516 aa17.12■□□□□ 0.33
Trim27-206ENSMUST00000222544 Mink1Q9JM52 1308 aa17.11■□□□□ 0.33
Trim27-206ENSMUST00000222544 Ncoa1P70365 1447 aa17.11■□□□□ 0.33
Trim27-206ENSMUST00000222544 Ncoa2Q61026 1462 aa17.11■□□□□ 0.33
Trim27-206ENSMUST00000222544 MccE9PWI3 1003 aa17.11■□□□□ 0.33
Trim27-206ENSMUST00000222544 Utp14aQ640M1 767 aaKnown RBP17.11■□□□□ 0.33
Trim27-206ENSMUST00000222544 Pde4cQ3UEI1 686 aa17.1■□□□□ 0.33
Trim27-206ENSMUST00000222544 Slx4Q6P1D7 1565 aa17.1■□□□□ 0.33
Trim27-206ENSMUST00000222544 CgnP59242 1191 aa17.1■□□□□ 0.33
Trim27-206ENSMUST00000222544 Gpatch11Q3UFS4 262 aa17.1■□□□□ 0.33
Trim27-206ENSMUST00000222544 Rtf1A2AQ19 715 aaKnown RBP17.1■□□□□ 0.33
Trim27-206ENSMUST00000222544 Frmpd1A2AKB4 1549 aa17.09■□□□□ 0.33
Trim27-206ENSMUST00000222544 Q3TQI7 289 aaKnown RBP17.09■□□□□ 0.33
Trim27-206ENSMUST00000222544 Rsph4aQ8BYM7 716 aa17.08■□□□□ 0.33
Trim27-206ENSMUST00000222544 Map3k5O35099 1380 aa17.08■□□□□ 0.32
Trim27-206ENSMUST00000222544 PrxO55103 1391 aa17.07■□□□□ 0.32
Trim27-206ENSMUST00000222544 PogzQ8BZH4 1409 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms