RNA–Protein interactions for RNA: ENSMUST00000217270.1

Ccdc84-211, Transcript of Coiled-coil domain-containing protein 84, mousemouse

TSL 1 (best) BASIC

Gene Ccdc84, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc84-211ENSMUST00000217270 Bcl9Q9D219 1425 aa29.6■■■□□ 2.33
Ccdc84-211ENSMUST00000217270 Kif3bQ61771 747 aa29.57■■■□□ 2.32
Ccdc84-211ENSMUST00000217270 Naip5Q9R016 1403 aa29.55■■■□□ 2.32
Ccdc84-211ENSMUST00000217270 Arhgap23Q69ZH9 1483 aa29.55■■■□□ 2.32
Ccdc84-211ENSMUST00000217270 Fbxo41Q6NS60 873 aa29.53■■■□□ 2.32
Ccdc84-211ENSMUST00000217270 3425401B19RikD3Z1D3 1412 aa29.52■■■□□ 2.32
Ccdc84-211ENSMUST00000217270 Med14A2ABV5 1459 aaKnown RBP29.51■■■□□ 2.31
Ccdc84-211ENSMUST00000217270 Adgrl2Q8JZZ7 1487 aa29.5■■■□□ 2.31
Ccdc84-211ENSMUST00000217270 Usp54Q8BL06 1588 aaKnown RBP29.5■■■□□ 2.31
Ccdc84-211ENSMUST00000217270 Rsph4aQ8BYM7 716 aa29.48■■■□□ 2.31
Ccdc84-211ENSMUST00000217270 Ltbp4Q8K4G1 1666 aa29.47■■■□□ 2.31
Ccdc84-211ENSMUST00000217270 Myo5cE9Q1F5 1742 aa29.46■■■□□ 2.31
Ccdc84-211ENSMUST00000217270 Adgrb2Q8CGM1 1561 aa29.45■■■□□ 2.31
Ccdc84-211ENSMUST00000217270 Spag9Q58A65 1321 aaKnown RBP29.44■■■□□ 2.3
Ccdc84-211ENSMUST00000217270 Cabp1Q9JLK7 227 aa29.43■■■□□ 2.3
Ccdc84-211ENSMUST00000217270 Phlpp1Q8CHE4 1687 aa29.43■■■□□ 2.3
Ccdc84-211ENSMUST00000217270 ShprhQ7TPQ3 1674 aa29.4■■■□□ 2.3
Ccdc84-211ENSMUST00000217270 Ncoa1P70365 1447 aa29.4■■■□□ 2.3
Ccdc84-211ENSMUST00000217270 Kdm3bQ6ZPY7 1562 aa29.39■■■□□ 2.3
Ccdc84-211ENSMUST00000217270 Pip4k2bQ80XI4 416 aa29.39■■■□□ 2.3
Ccdc84-211ENSMUST00000217270 Rimbp3Q3V0F0 1606 aa29.38■■■□□ 2.29
Ccdc84-211ENSMUST00000217270 Ssh2Q5SW75 1423 aa29.38■■■□□ 2.29
Ccdc84-211ENSMUST00000217270 Il16O54824 1322 aa29.38■■■□□ 2.29
Ccdc84-211ENSMUST00000217270 Prex1Q69ZK0 1650 aa29.37■■■□□ 2.29
Ccdc84-211ENSMUST00000217270 Abcc6Q9R1S7 1498 aa29.37■■■□□ 2.29
Ccdc84-211ENSMUST00000217270 Gm13697A2AK42 830 aa29.34■■■□□ 2.29
Ccdc84-211ENSMUST00000217270 Kif1bQ60575 1816 aaKnown RBP29.34■■■□□ 2.29
Ccdc84-211ENSMUST00000217270 Vps8Q0P5W1 1427 aa29.33■■■□□ 2.29
Ccdc84-211ENSMUST00000217270 Adamts7Q68SA9 1657 aa29.33■■■□□ 2.29
Ccdc84-211ENSMUST00000217270 Zbtb7cQ8VCZ7 619 aa29.3■■■□□ 2.28
Ccdc84-211ENSMUST00000217270 Chic2Q9D9G3 165 aa29.3■■■□□ 2.28
Ccdc84-211ENSMUST00000217270 Hfm1D3Z4R1 1434 aa29.28■■■□□ 2.28
Ccdc84-211ENSMUST00000217270 GphnQ8BUV3 769 aaKnown RBP29.25■■■□□ 2.27
Ccdc84-211ENSMUST00000217270 Robo2Q7TPD3 1470 aa29.24■■■□□ 2.27
Ccdc84-211ENSMUST00000217270 Chd2E9PZM4 1827 aaKnown RBP29.24■■■□□ 2.27
Ccdc84-211ENSMUST00000217270 Scaf11E9PZM7 1456 aaKnown RBP29.21■■■□□ 2.27
Ccdc84-211ENSMUST00000217270 Rims2Q9EQZ7 1530 aa29.19■■■□□ 2.26
Ccdc84-211ENSMUST00000217270 Akap12Q9WTQ5 1684 aa29.18■■■□□ 2.26
Ccdc84-211ENSMUST00000217270 Gli3Q61602 1583 aa29.18■■■□□ 2.26
Ccdc84-211ENSMUST00000217270 AlkP97793 1621 aa29.15■■■□□ 2.26
Ccdc84-211ENSMUST00000217270 Adgrb3Q80ZF8 1522 aa29.13■■■□□ 2.25
Ccdc84-211ENSMUST00000217270 Kdm5aQ3UXZ9 1690 aa29.12■■■□□ 2.25
Ccdc84-211ENSMUST00000217270 Hnrnpul2Q00PI9 745 aaKnown RBP29.12■■■□□ 2.25
Ccdc84-211ENSMUST00000217270 Pde4cQ3UEI1 686 aa29.12■■■□□ 2.25
Ccdc84-211ENSMUST00000217270 Tmem131lQ3U3D7 1597 aa29.09■■■□□ 2.25
Ccdc84-211ENSMUST00000217270 DroshaQ5HZJ0 1373 aaKnown RBP29.08■■■□□ 2.25
Ccdc84-211ENSMUST00000217270 Asxl1P59598 1514 aa29.07■■■□□ 2.24
Ccdc84-211ENSMUST00000217270 UacaQ8CGB3 1411 aa29.07■■■□□ 2.24
Ccdc84-211ENSMUST00000217270 Kif13aQ9EQW7 1749 aa29.05■■■□□ 2.24
Ccdc84-211ENSMUST00000217270 Rfx7F8VPJ6 1459 aa29.04■■■□□ 2.24
Ccdc84-211ENSMUST00000217270 Lamc1P02468 1607 aaKnown RBP29.03■■■□□ 2.24
Ccdc84-211ENSMUST00000217270 Prdm2A2A7B5 1709 aaKnown RBP29.03■■■□□ 2.24
Ccdc84-211ENSMUST00000217270 Iqgap1Q9JKF1 1657 aaKnown RBP29.02■■■□□ 2.24
Ccdc84-211ENSMUST00000217270 Fhad1A6PWD2 1420 aa29.01■■■□□ 2.23
Ccdc84-211ENSMUST00000217270 Rapgef3Q8VCC8 918 aa29■■■□□ 2.23
Ccdc84-211ENSMUST00000217270 NclP09405 707 aaKnown RBP28.99■■■□□ 2.23
Ccdc84-211ENSMUST00000217270 Itsn1Q9Z0R4 1714 aa28.99■■■□□ 2.23
Ccdc84-211ENSMUST00000217270 Tubgcp6G5E8P0 1769 aa28.98■■■□□ 2.23
Ccdc84-211ENSMUST00000217270 Iqsec2Q5DU25 1478 aa28.98■■■□□ 2.23
Ccdc84-211ENSMUST00000217270 Ecm2Q5FW85 670 aa28.98■■■□□ 2.23
Ccdc84-211ENSMUST00000217270 AnkarA2RT91 1465 aa28.97■■■□□ 2.23
Ccdc84-211ENSMUST00000217270 PzpQ61838 1495 aa28.97■■■□□ 2.23
Ccdc84-211ENSMUST00000217270 Gemin5Q8BX17 1502 aaKnown RBP28.96■■■□□ 2.23
Ccdc84-211ENSMUST00000217270 Fam50aQ9WV03 339 aaKnown RBP28.96■■■□□ 2.23
Ccdc84-211ENSMUST00000217270 Nrxn3Q6P9K9 1571 aa28.94■■■□□ 2.22
Ccdc84-211ENSMUST00000217270 Ino80Q6ZPV2 1559 aa28.94■■■□□ 2.22
Ccdc84-211ENSMUST00000217270 Ttc21bQ0HA38 1315 aa28.93■■■□□ 2.22
Ccdc84-211ENSMUST00000217270 Zc3h13E9Q784 1729 aaKnown RBP28.92■■■□□ 2.22
Ccdc84-211ENSMUST00000217270 Arid4bA2CG63 1314 aaKnown RBP28.91■■■□□ 2.22
Ccdc84-211ENSMUST00000217270 Ylpm1Q9R0I7 1386 aaKnown RBP28.9■■■□□ 2.22
Ccdc84-211ENSMUST00000217270 Skint5A7XUY5 1461 aa28.9■■■□□ 2.22
Ccdc84-211ENSMUST00000217270 Nup155Q99P88 1391 aaKnown RBP28.88■■■□□ 2.21
Ccdc84-211ENSMUST00000217270 Hspa1lP16627 641 aa28.88■■■□□ 2.21
Ccdc84-211ENSMUST00000217270 Map4P27546 1125 aaKnown RBP28.88■■■□□ 2.21
Ccdc84-211ENSMUST00000217270 Clstn2Q9ER65 966 aa28.87■■■□□ 2.21
Ccdc84-211ENSMUST00000217270 Zfp644E9QA22 1323 aa28.86■■■□□ 2.21
Ccdc84-211ENSMUST00000217270 Eif2ak4Q9QZ05 1648 aa28.86■■■□□ 2.21
Ccdc84-211ENSMUST00000217270 Med1Q925J9 1575 aa28.84■■■□□ 2.21
Ccdc84-211ENSMUST00000217270 Myom3A2ABU4 1439 aa28.83■■■□□ 2.21
Ccdc84-211ENSMUST00000217270 Setd1aE9PYH6 1716 aa28.83■■■□□ 2.21
Ccdc84-211ENSMUST00000217270 UbtfP25976 765 aaKnown RBP28.82■■■□□ 2.2
Ccdc84-211ENSMUST00000217270 Iqgap3F8VQ29 1632 aa28.8■■■□□ 2.2
Ccdc84-211ENSMUST00000217270 Naip7Q9JIB3 1402 aa28.79■■■□□ 2.2
Ccdc84-211ENSMUST00000217270 Nsd2Q8BVE8 1365 aa28.78■■■□□ 2.2
Ccdc84-211ENSMUST00000217270 Efcab6Q6P1E8 1516 aa28.76■■■□□ 2.19
Ccdc84-211ENSMUST00000217270 Tecpr2Q3UH45 1423 aa28.76■■■□□ 2.19
Ccdc84-211ENSMUST00000217270 Myo3aQ8K3H5 1613 aa28.74■■■□□ 2.19
Ccdc84-211ENSMUST00000217270 Tarbp1E9Q368 1579 aa28.74■■■□□ 2.19
Ccdc84-211ENSMUST00000217270 Uggt1Q6P5E4 1551 aa28.73■■■□□ 2.19
Ccdc84-211ENSMUST00000217270 Txndc2Q6P902 515 aa28.73■■■□□ 2.19
Ccdc84-211ENSMUST00000217270 Cd109Q8R422 1442 aa28.72■■■□□ 2.19
Ccdc84-211ENSMUST00000217270 PplQ9R269 1755 aa28.7■■■□□ 2.19
Ccdc84-211ENSMUST00000217270 Cypt1Q8CH20 168 aa28.7■■■□□ 2.18
Ccdc84-211ENSMUST00000217270 Ttll5Q8CHB8 1328 aa28.69■■■□□ 2.18
Ccdc84-211ENSMUST00000217270 Lmtk3Q5XJV6 1424 aa28.69■■■□□ 2.18
Ccdc84-211ENSMUST00000217270 Thsd7aQ69ZU6 1645 aa28.69■■■□□ 2.18
Ccdc84-211ENSMUST00000217270 Mia2Q91ZV0 1396 aa28.66■■■□□ 2.18
Ccdc84-211ENSMUST00000217270 PtprgQ05909 1442 aa28.65■■■□□ 2.18
Ccdc84-211ENSMUST00000217270 Bcl11bQ99PV8 884 aa28.64■■■□□ 2.18
Ccdc84-211ENSMUST00000217270 Atp7aQ64430 1491 aa28.61■■■□□ 2.17
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms