RNA–Protein interactions for RNA: ENSMUST00000210789.1

Prpf40a-208, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 3,773 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-208ENSMUST00000210789 EspnQ9ET47 871 aa11.56□□□□□ -0.56
Prpf40a-208ENSMUST00000210789 Slx4Q6P1D7 1565 aa11.56□□□□□ -0.56
Prpf40a-208ENSMUST00000210789 Ccnb3Q810T2 1396 aa11.56□□□□□ -0.56
Prpf40a-208ENSMUST00000210789 Setd1bQ8CFT2 1985 aa11.56□□□□□ -0.56
Prpf40a-208ENSMUST00000210789 Lmo7E9PYF4 1699 aaKnown RBP11.56□□□□□ -0.56
Prpf40a-208ENSMUST00000210789 Podxl2Q8CAE9 603 aa11.55□□□□□ -0.56
Prpf40a-208ENSMUST00000210789 Abca5Q8K448 1642 aa11.55□□□□□ -0.56
Prpf40a-208ENSMUST00000210789 Nom1Q3UFM5 854 aaKnown RBP11.55□□□□□ -0.56
Prpf40a-208ENSMUST00000210789 Cul9Q80TT8 1865 aa11.55□□□□□ -0.56
Prpf40a-208ENSMUST00000210789 Gys2Q8VCB3 704 aa11.55□□□□□ -0.56
Prpf40a-208ENSMUST00000210789 Gm14025A2AP89 1413 aa11.54□□□□□ -0.56
Prpf40a-208ENSMUST00000210789 Il4rP16382 810 aa11.54□□□□□ -0.56
Prpf40a-208ENSMUST00000210789 4933402E13RikQ9D4D2 429 aa11.54□□□□□ -0.56
Prpf40a-208ENSMUST00000210789 Abca16E9PWJ7 1678 aa11.54□□□□□ -0.56
Prpf40a-208ENSMUST00000210789 Gm1043A0A140LJC2 1431 aa11.53□□□□□ -0.56
Prpf40a-208ENSMUST00000210789 Dhx57Q6P5D3 1388 aaKnown RBP11.52□□□□□ -0.56
Prpf40a-208ENSMUST00000210789 SlkO54988 1233 aa11.52□□□□□ -0.57
Prpf40a-208ENSMUST00000210789 Sox12Q04890 314 aa11.52□□□□□ -0.57
Prpf40a-208ENSMUST00000210789 Ncoa2Q61026 1462 aa11.52□□□□□ -0.57
Prpf40a-208ENSMUST00000210789 Vsig10D3YX43 558 aa11.52□□□□□ -0.57
Prpf40a-208ENSMUST00000210789 Samd1D3YXK1 519 aa11.51□□□□□ -0.57
Prpf40a-208ENSMUST00000210789 Pdlim2Q8R1G6 349 aa11.51□□□□□ -0.57
Prpf40a-208ENSMUST00000210789 4930567H17RikQ3V0K5 233 aa11.51□□□□□ -0.57
Prpf40a-208ENSMUST00000210789 Abcc2Q8VI47 1543 aa11.51□□□□□ -0.57
Prpf40a-208ENSMUST00000210789 NudcO35685 332 aaKnown RBP11.5□□□□□ -0.57
Prpf40a-208ENSMUST00000210789 Ripk4Q9ERK0 786 aa11.5□□□□□ -0.57
Prpf40a-208ENSMUST00000210789 Trim44Q9QXA7 346 aa11.5□□□□□ -0.57
Prpf40a-208ENSMUST00000210789 Kif20aP97329 887 aa11.49□□□□□ -0.57
Prpf40a-208ENSMUST00000210789 Trim30dE9PWL0 497 aa11.49□□□□□ -0.57
Prpf40a-208ENSMUST00000210789 Ccdc141E9Q8Q6 1531 aa11.49□□□□□ -0.57
Prpf40a-208ENSMUST00000210789 Hsp90ab1P11499 724 aaKnown RBP11.49□□□□□ -0.57
Prpf40a-208ENSMUST00000210789 Rad21Q61550 635 aaKnown RBP11.49□□□□□ -0.57
Prpf40a-208ENSMUST00000210789 Ppm1gQ61074 542 aa11.48□□□□□ -0.57
Prpf40a-208ENSMUST00000210789 Mug1P28665 1476 aa11.48□□□□□ -0.57
Prpf40a-208ENSMUST00000210789 Erbb4Q61527 1308 aa11.48□□□□□ -0.57
Prpf40a-208ENSMUST00000210789 Fam163aQ8CAA5 168 aa11.47□□□□□ -0.57
Prpf40a-208ENSMUST00000210789 Arid4bA2CG63 1314 aaKnown RBP11.47□□□□□ -0.57
Prpf40a-208ENSMUST00000210789 Chmp4cQ9D7F7 232 aa11.46□□□□□ -0.57
Prpf40a-208ENSMUST00000210789 Ncoa3O09000 1398 aa11.46□□□□□ -0.57
Prpf40a-208ENSMUST00000210789 Peg3Q3URU2 1571 aa11.46□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 Map3k4O08648 1597 aa11.45□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 Abcc1O35379 1528 aa11.45□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 Tpm2P58774 284 aa11.45□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 NexmifQ5DTT1 1515 aa11.45□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 Mia2Q91ZV0 1396 aa11.45□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 Arid3cA6PWV5 409 aa11.45□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 Safb2Q80YR5 991 aaKnown RBP11.45□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 Rapgef6Q5NCJ1 1609 aa11.45□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 Magi1Q6RHR9 1471 aa11.45□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 Mtus2Q3UHD3 1353 aa11.44□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 BC005561E9Q5E2 1589 aa11.44□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 Cabp1Q9JLK7 227 aa11.44□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 Arhgef12Q8R4H2 1543 aaKnown RBP11.43□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 Htatsf1Q8BGC0 757 aa11.43□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 Clcn1Q64347 994 aa11.43□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 Dnmt1P13864 1620 aaKnown RBP11.42□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 Kiaa1211Q5PR69 1207 aa11.42□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 Erbb3Q61526 1339 aa11.42□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 Stac3Q8BZ71 360 aa11.42□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 Ythdc2B2RR83 1445 aaKnown RBP11.42□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 Fam13bQ8K2H3 851 aa11.41□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 Chmp5Q9D7S9 219 aa11.41□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 3425401B19RikD3Z1D3 1412 aa11.4□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 Tdrd9Q14BI7 1383 aa11.4□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 Apbb1Q9QXJ1 710 aa11.4□□□□□ -0.58
Prpf40a-208ENSMUST00000210789 Ak7Q9D2H2 614 aa11.39□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Plcb2A3KGF7 1181 aa11.39□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Erich6bQ9D4S6 220 aa11.39□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Kdm5bQ80Y84 1544 aa11.39□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Plekhh2Q8C115 1491 aa11.39□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Prkrip1Q9CWV6 186 aaKnown RBP11.39□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Lekr1B2RVN1 116 aa11.38□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Nectin2P32507 530 aa11.38□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 VgfQ0VGU4 617 aa11.37□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Lmtk2Q3TYD6 1471 aa11.37□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Gm13695A2AK44 830 aa11.37□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Dhx16G3X8X0 1044 aaKnown RBP11.37□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Igf1rQ60751 1373 aa11.37□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 UacaQ8CGB3 1411 aa11.37□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Cbx1P83917 185 aaKnown RBP11.37□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Ddrgk1Q80WW9 315 aa11.37□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Fancd2Q80V62 1450 aa11.36□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 PnisrA2AJT4 805 aaKnown RBP11.36□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Gtpbp6Q3U6U5 514 aa11.36□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 BbxQ8VBW5 907 aa11.36□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Gapvd1Q6PAR5 1458 aa11.36□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 A2mQ6GQT1 1474 aa11.35□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Mcm4P49717 862 aa11.35□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Arhgef11Q68FM7 1552 aa11.35□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Ube2q2Q8K2Z8 378 aa11.35□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Rrbp1Q99PL5 1605 aaKnown RBP11.34□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Prex2Q3LAC4 1598 aa11.34□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Fhad1A6PWD2 1420 aa11.34□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Arid4aF8VPQ2 1261 aaKnown RBP11.34□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Plin1Q8CGN5 517 aa11.34□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Rrp7aQ9D1C9 280 aaKnown RBP11.34□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Fbxo3Q9DC63 480 aa11.34□□□□□ -0.59
Prpf40a-208ENSMUST00000210789 Sart1Q9Z315 806 aaKnown RBP11.33□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Naip2Q9QUK4 1447 aa11.33□□□□□ -0.6
Prpf40a-208ENSMUST00000210789 Gm156Q58A37 223 aa11.32□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms