RNA–Protein interactions for RNA: ENSMUST00000207054.1

Smarca2-220, Transcript of Probable global transcription activator SNF2L2, mousemouse

TSL 5 BASIC

Gene Smarca2, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2-220ENSMUST00000207054 Bcl11bQ99PV8 884 aa6.79□□□□□ -1.32
Smarca2-220ENSMUST00000207054 Myt1lP97500 1187 aa6.78□□□□□ -1.32
Smarca2-220ENSMUST00000207054 Aebp1Q640N1 1128 aa6.78□□□□□ -1.32
Smarca2-220ENSMUST00000207054 Lrrc14bQ3UJB3 510 aa6.77□□□□□ -1.33
Smarca2-220ENSMUST00000207054 Safb2Q80YR5 991 aaKnown RBP6.77□□□□□ -1.33
Smarca2-220ENSMUST00000207054 Pdia6Q922R8 440 aaKnown RBP6.77□□□□□ -1.33
Smarca2-220ENSMUST00000207054 Rasgrp4Q8BTM9 673 aa6.76□□□□□ -1.33
Smarca2-220ENSMUST00000207054 Sh3bp1P55194 680 aa6.76□□□□□ -1.33
Smarca2-220ENSMUST00000207054 Fam135aQ6NS59 1506 aa6.75□□□□□ -1.33
Smarca2-220ENSMUST00000207054 Jph4Q80WT0 628 aa6.75□□□□□ -1.33
Smarca2-220ENSMUST00000207054 Tpcn2Q8BWC0 731 aa6.75□□□□□ -1.33
Smarca2-220ENSMUST00000207054 Speer4f1Q9D5Q6 258 aa6.75□□□□□ -1.33
Smarca2-220ENSMUST00000207054 Gpatch11Q3UFS4 262 aa6.75□□□□□ -1.33
Smarca2-220ENSMUST00000207054 Otop3Q80UF9 577 aa6.75□□□□□ -1.33
Smarca2-220ENSMUST00000207054 Prr7Q3V0I2 269 aa6.74□□□□□ -1.33
Smarca2-220ENSMUST00000207054 ZyxQ62523 564 aa6.74□□□□□ -1.33
Smarca2-220ENSMUST00000207054 Atad2bE9Q166 1460 aaKnown RBP6.72□□□□□ -1.33
Smarca2-220ENSMUST00000207054 Tor1aip2Q8BYU6 502 aa6.72□□□□□ -1.33
Smarca2-220ENSMUST00000207054 Mink1Q9JM52 1308 aa6.72□□□□□ -1.33
Smarca2-220ENSMUST00000207054 Brpf1B2RRD7 1212 aa6.71□□□□□ -1.33
Smarca2-220ENSMUST00000207054 Ccer2J3QPU5 274 aa6.71□□□□□ -1.33
Smarca2-220ENSMUST00000207054 Actn4P57780 912 aaKnown RBP6.71□□□□□ -1.33
Smarca2-220ENSMUST00000207054 Cers3Q1A3B0 383 aa6.71□□□□□ -1.33
Smarca2-220ENSMUST00000207054 Slc12a5Q91V14 1138 aa6.71□□□□□ -1.33
Smarca2-220ENSMUST00000207054 Trim26Q99PN3 545 aa6.71□□□□□ -1.33
Smarca2-220ENSMUST00000207054 Cc2d2aQ8CFW7 1633 aa6.71□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Krtap28-10A0A1Y7VP58 119 aa6.7□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Sparcl1P70663 650 aa6.7□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Eya1P97767 591 aa6.7□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Ffar3Q3UFD7 319 aa6.7□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Pak3Q61036 559 aa6.7□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Fam50aQ9WV03 339 aaKnown RBP6.7□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Crybg2B7ZCC2 1516 aa6.7□□□□□ -1.34
Smarca2-220ENSMUST00000207054 ClspnQ80YR7 1315 aa6.7□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Ankrd65F6YK91 380 aa6.7□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Rb1cc1Q9ESK9 1588 aa6.69□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Gm13695A2AK44 830 aa6.69□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Rangap1P46061 589 aaKnown RBP6.69□□□□□ -1.34
Smarca2-220ENSMUST00000207054 XpcP51612 930 aa6.69□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Dusp27Q148W8 1138 aa6.69□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Map3k10Q66L42 940 aa6.69□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Ercc6F8VPZ5 1481 aa6.69□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Znf710Q3U288 666 aa6.68□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Ccdc96Q9CR92 584 aa6.68□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Erich6D3Z6S9 713 aa6.68□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Nom1Q3UFM5 854 aaKnown RBP6.68□□□□□ -1.34
Smarca2-220ENSMUST00000207054 DaxxO35613 739 aa6.67□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Znf330Q922H9 316 aa6.67□□□□□ -1.34
Smarca2-220ENSMUST00000207054 OscarQ8VBT3 265 aa6.67□□□□□ -1.34
Smarca2-220ENSMUST00000207054 ErmnQ5EBJ4 281 aa6.66□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Dnajc14Q921R4 703 aa6.66□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Ap3b1Q9Z1T1 1105 aa6.66□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Baz1aO88379 1555 aa6.66□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Irf5P56477 497 aa6.66□□□□□ -1.34
Smarca2-220ENSMUST00000207054 AU015836B2RUM3 263 aa6.65□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Speer4f2E9Q366 295 aa6.65□□□□□ -1.34
Smarca2-220ENSMUST00000207054 LipiF6YQT7 476 aa6.65□□□□□ -1.34
Smarca2-220ENSMUST00000207054 Mnx1Q9QZW9 404 aa6.65□□□□□ -1.35
Smarca2-220ENSMUST00000207054 CadpsQ80TJ1 1355 aa6.65□□□□□ -1.35
Smarca2-220ENSMUST00000207054 GopcQ8BH60 463 aa6.64□□□□□ -1.35
Smarca2-220ENSMUST00000207054 Sh3bp5Q9Z131 463 aa6.64□□□□□ -1.35
Smarca2-220ENSMUST00000207054 Cwc22Q8C5N3 908 aaKnown RBP6.64□□□□□ -1.35
Smarca2-220ENSMUST00000207054 Gimap6Q8K349 305 aa6.64□□□□□ -1.35
Smarca2-220ENSMUST00000207054 Scnn1bQ9WU38 638 aa6.64□□□□□ -1.35
Smarca2-220ENSMUST00000207054 Smarca2Q6DIC0 1577 aa6.63□□□□□ -1.35
Smarca2-220ENSMUST00000207054 Gpr37Q9QY42 600 aa6.62□□□□□ -1.35
Smarca2-220ENSMUST00000207054 Prom2Q3UUY6 835 aa6.62□□□□□ -1.35
Smarca2-220ENSMUST00000207054 Hs1bp3Q3TC93 395 aa6.61□□□□□ -1.35
Smarca2-220ENSMUST00000207054 Skiv2lQ6NZR5 1244 aa6.61□□□□□ -1.35
Smarca2-220ENSMUST00000207054 HomezQ80W88 542 aa6.61□□□□□ -1.35
Smarca2-220ENSMUST00000207054 Tnnt2P50752 301 aa6.61□□□□□ -1.35
Smarca2-220ENSMUST00000207054 Gjc2Q8BQU6 440 aa6.61□□□□□ -1.35
Smarca2-220ENSMUST00000207054 Calr4Q3TQS0 420 aa6.6□□□□□ -1.35
Smarca2-220ENSMUST00000207054 Iqcf3Q9D498 203 aa6.6□□□□□ -1.35
Smarca2-220ENSMUST00000207054 Apba1B2RUJ5 842 aa6.6□□□□□ -1.35
Smarca2-220ENSMUST00000207054 Tex2Q6ZPJ0 1128 aaKnown RBP6.6□□□□□ -1.35
Smarca2-220ENSMUST00000207054 Prrt3Q6PE13 971 aa6.59□□□□□ -1.35
Smarca2-220ENSMUST00000207054 Liat1Q810M6 228 aa6.59□□□□□ -1.36
Smarca2-220ENSMUST00000207054 Stac3Q8BZ71 360 aa6.58□□□□□ -1.36
Smarca2-220ENSMUST00000207054 TraipQ8VIG6 470 aa6.58□□□□□ -1.36
Smarca2-220ENSMUST00000207054 C1qbpO35658 278 aa6.58□□□□□ -1.36
Smarca2-220ENSMUST00000207054 Aldh16a1Q571I9 802 aa6.58□□□□□ -1.36
Smarca2-220ENSMUST00000207054 Plin1Q8CGN5 517 aa6.58□□□□□ -1.36
Smarca2-220ENSMUST00000207054 Ipo9Q91YE6 1041 aa6.58□□□□□ -1.36
Smarca2-220ENSMUST00000207054 Inpp5dQ9ES52 1191 aa6.58□□□□□ -1.36
Smarca2-220ENSMUST00000207054 Ppfibp2O35711 882 aa6.57□□□□□ -1.36
Smarca2-220ENSMUST00000207054 Smarca4Q3TKT4 1613 aaKnown RBP6.56□□□□□ -1.36
Smarca2-220ENSMUST00000207054 Hsp90b1P08113 802 aaKnown RBP6.56□□□□□ -1.36
Smarca2-220ENSMUST00000207054 Pcmtd1P59913 357 aa6.56□□□□□ -1.36
Smarca2-220ENSMUST00000207054 Uri1Q3TLD5 531 aa6.56□□□□□ -1.36
Smarca2-220ENSMUST00000207054 Map2k5Q9WVS7 448 aa6.56□□□□□ -1.36
Smarca2-220ENSMUST00000207054 Wdr62Q3U3T8 1523 aa6.56□□□□□ -1.36
Smarca2-220ENSMUST00000207054 1700017N19RikA0A087WPJ1 469 aa6.55□□□□□ -1.36
Smarca2-220ENSMUST00000207054 Hmgb1P63158 215 aaKnown RBP6.55□□□□□ -1.36
Smarca2-220ENSMUST00000207054 Lrfn2Q80TG9 788 aa6.55□□□□□ -1.36
Smarca2-220ENSMUST00000207054 GcgrQ61606 485 aa6.54□□□□□ -1.36
Smarca2-220ENSMUST00000207054 TMEM121BQ99MX7 572 aa6.54□□□□□ -1.36
Smarca2-220ENSMUST00000207054 Neurod2Q62414 383 aa6.54□□□□□ -1.36
Smarca2-220ENSMUST00000207054 Zcwpw1Q6IR42 630 aa6.54□□□□□ -1.36
Smarca2-220ENSMUST00000207054 Clec2iQ9WVF9 217 aa6.54□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms