RNA–Protein interactions for RNA: ENSMUST00000200959.1

Scn8a-207, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 3 BASIC

Gene Scn8a, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-207ENSMUST00000200959 Amigo3Q8C2S7 508 aa13□□□□□ -0.33
Scn8a-207ENSMUST00000200959 Peg3Q3URU2 1571 aa12.99□□□□□ -0.33
Scn8a-207ENSMUST00000200959 Sart1Q9Z315 806 aaKnown RBP12.99□□□□□ -0.33
Scn8a-207ENSMUST00000200959 GphnQ8BUV3 769 aaKnown RBP12.98□□□□□ -0.33
Scn8a-207ENSMUST00000200959 Med14A2ABV5 1459 aaKnown RBP12.97□□□□□ -0.33
Scn8a-207ENSMUST00000200959 Gm13697A2AK42 830 aa12.97□□□□□ -0.33
Scn8a-207ENSMUST00000200959 Med1Q925J9 1575 aa12.97□□□□□ -0.33
Scn8a-207ENSMUST00000200959 DroshaQ5HZJ0 1373 aaKnown RBP12.96□□□□□ -0.33
Scn8a-207ENSMUST00000200959 Cfap74Q3UY96 1578 aa12.96□□□□□ -0.33
Scn8a-207ENSMUST00000200959 NexmifQ5DTT1 1515 aa12.96□□□□□ -0.33
Scn8a-207ENSMUST00000200959 Fhod3Q76LL6 1578 aa12.95□□□□□ -0.34
Scn8a-207ENSMUST00000200959 Lmod2Q3UHZ5 550 aa12.95□□□□□ -0.34
Scn8a-207ENSMUST00000200959 Xrn1P97789 1719 aaKnown RBP12.95□□□□□ -0.34
Scn8a-207ENSMUST00000200959 Iqgap1Q9JKF1 1657 aaKnown RBP12.94□□□□□ -0.34
Scn8a-207ENSMUST00000200959 Tom1O88746 492 aa12.93□□□□□ -0.34
Scn8a-207ENSMUST00000200959 Setd5Q5XJV7 1441 aa12.92□□□□□ -0.34
Scn8a-207ENSMUST00000200959 Tiam1Q60610 1591 aa12.92□□□□□ -0.34
Scn8a-207ENSMUST00000200959 DnmbpQ6TXD4 1580 aa12.92□□□□□ -0.34
Scn8a-207ENSMUST00000200959 Adcy10Q8C0T9 1614 aa12.91□□□□□ -0.34
Scn8a-207ENSMUST00000200959 Nos1Q9Z0J4 1429 aa12.91□□□□□ -0.34
Scn8a-207ENSMUST00000200959 Znf518aB2RRF6 1478 aaKnown RBP12.91□□□□□ -0.34
Scn8a-207ENSMUST00000200959 Rgs17Q9QZB0 210 aa12.9□□□□□ -0.34
Scn8a-207ENSMUST00000200959 Sema6bO54951 886 aa12.88□□□□□ -0.35
Scn8a-207ENSMUST00000200959 Abcc6Q9R1S7 1498 aa12.88□□□□□ -0.35
Scn8a-207ENSMUST00000200959 Nrxn3Q6P9K9 1571 aa12.88□□□□□ -0.35
Scn8a-207ENSMUST00000200959 Naip5Q9R016 1403 aa12.88□□□□□ -0.35
Scn8a-207ENSMUST00000200959 NinlQ6ZQ12 1394 aa12.87□□□□□ -0.35
Scn8a-207ENSMUST00000200959 Gm1043A0A140LJC2 1431 aa12.87□□□□□ -0.35
Scn8a-207ENSMUST00000200959 MpndQ3TV65 487 aa12.86□□□□□ -0.35
Scn8a-207ENSMUST00000200959 Arid4bA2CG63 1314 aaKnown RBP12.85□□□□□ -0.35
Scn8a-207ENSMUST00000200959 Chd2E9PZM4 1827 aaKnown RBP12.83□□□□□ -0.35
Scn8a-207ENSMUST00000200959 Asxl1P59598 1514 aa12.83□□□□□ -0.36
Scn8a-207ENSMUST00000200959 Cdk13Q69ZA1 1511 aaKnown RBP12.83□□□□□ -0.36
Scn8a-207ENSMUST00000200959 Kif3bQ61771 747 aa12.82□□□□□ -0.36
Scn8a-207ENSMUST00000200959 Fnbp4Q6ZQ03 1031 aa12.82□□□□□ -0.36
Scn8a-207ENSMUST00000200959 Pik3c2aQ61194 1686 aa12.81□□□□□ -0.36
Scn8a-207ENSMUST00000200959 Uggt2E9Q4X2 1504 aa12.8□□□□□ -0.36
Scn8a-207ENSMUST00000200959 Gimap5Q8BWF2 308 aa12.8□□□□□ -0.36
Scn8a-207ENSMUST00000200959 Cntnap1O54991 1385 aa12.8□□□□□ -0.36
Scn8a-207ENSMUST00000200959 Nhsl1Q8CAF4 1587 aa12.79□□□□□ -0.36
Scn8a-207ENSMUST00000200959 Adgrb2Q8CGM1 1561 aa12.79□□□□□ -0.36
Scn8a-207ENSMUST00000200959 Caskin1Q6P9K8 1431 aa12.79□□□□□ -0.36
Scn8a-207ENSMUST00000200959 Brinp3Q499E0 766 aa12.78□□□□□ -0.36
Scn8a-207ENSMUST00000200959 Kif21bQ9QXL1 1668 aa12.77□□□□□ -0.36
Scn8a-207ENSMUST00000200959 Dmrt2Q8BG36 561 aa12.77□□□□□ -0.37
Scn8a-207ENSMUST00000200959 Slc5a4bQ91ZP4 660 aa12.77□□□□□ -0.37
Scn8a-207ENSMUST00000200959 Topbp1Q6ZQF0 1515 aa12.77□□□□□ -0.37
Scn8a-207ENSMUST00000200959 MypopQ8R4U1 393 aa12.76□□□□□ -0.37
Scn8a-207ENSMUST00000200959 3425401B19RikD3Z1D3 1412 aa12.76□□□□□ -0.37
Scn8a-207ENSMUST00000200959 Zbtb7cQ8VCZ7 619 aa12.75□□□□□ -0.37
Scn8a-207ENSMUST00000200959 ShprhQ7TPQ3 1674 aa12.74□□□□□ -0.37
Scn8a-207ENSMUST00000200959 Robo2Q7TPD3 1470 aa12.74□□□□□ -0.37
Scn8a-207ENSMUST00000200959 Hfm1D3Z4R1 1434 aa12.74□□□□□ -0.37
Scn8a-207ENSMUST00000200959 Qtrt2B8ZXI1 415 aa12.74□□□□□ -0.37
Scn8a-207ENSMUST00000200959 Rrp7aQ9D1C9 280 aaKnown RBP12.74□□□□□ -0.37
Scn8a-207ENSMUST00000200959 Fmn2Q9JL04 1578 aa12.73□□□□□ -0.37
Scn8a-207ENSMUST00000200959 Mbd5B1AYB6 1498 aa12.73□□□□□ -0.37
Scn8a-207ENSMUST00000200959 Ttll13A4Q9F6 804 aa12.73□□□□□ -0.37
Scn8a-207ENSMUST00000200959 Lrp6O88572 1613 aa12.73□□□□□ -0.37
Scn8a-207ENSMUST00000200959 Eea1Q8BL66 1411 aa12.72□□□□□ -0.37
Scn8a-207ENSMUST00000200959 Ccnb3Q810T2 1396 aa12.72□□□□□ -0.37
Scn8a-207ENSMUST00000200959 Setd1aE9PYH6 1716 aa12.71□□□□□ -0.37
Scn8a-207ENSMUST00000200959 Kdm2bQ6P1G2 1309 aa12.71□□□□□ -0.37
Scn8a-207ENSMUST00000200959 Thsd7aQ69ZU6 1645 aa12.71□□□□□ -0.37
Scn8a-207ENSMUST00000200959 Adgrl1Q80TR1 1466 aa12.71□□□□□ -0.38
Scn8a-207ENSMUST00000200959 Col18a1P39061 1774 aa12.7□□□□□ -0.38
Scn8a-207ENSMUST00000200959 CntlnA2AM05 1397 aa12.69□□□□□ -0.38
Scn8a-207ENSMUST00000200959 Abca17E9PX95 1733 aa12.69□□□□□ -0.38
Scn8a-207ENSMUST00000200959 PtprvP70289 1705 aa12.69□□□□□ -0.38
Scn8a-207ENSMUST00000200959 Eif2ak4Q9QZ05 1648 aa12.69□□□□□ -0.38
Scn8a-207ENSMUST00000200959 Kif13aQ9EQW7 1749 aa12.68□□□□□ -0.38
Scn8a-207ENSMUST00000200959 Prex1Q69ZK0 1650 aa12.68□□□□□ -0.38
Scn8a-207ENSMUST00000200959 Plch2A2AP18 1501 aa12.67□□□□□ -0.38
Scn8a-207ENSMUST00000200959 Myo5cE9Q1F5 1742 aa12.67□□□□□ -0.38
Scn8a-207ENSMUST00000200959 Adgrb3Q80ZF8 1522 aa12.66□□□□□ -0.38
Scn8a-207ENSMUST00000200959 Usp54Q8BL06 1588 aaKnown RBP12.65□□□□□ -0.38
Scn8a-207ENSMUST00000200959 Rsph4aQ8BYM7 716 aa12.65□□□□□ -0.38
Scn8a-207ENSMUST00000200959 Evi5lH3BKQ3 813 aa12.64□□□□□ -0.39
Scn8a-207ENSMUST00000200959 Akap12Q9WTQ5 1684 aa12.64□□□□□ -0.39
Scn8a-207ENSMUST00000200959 Rapgefl1Q68EF8 662 aa12.63□□□□□ -0.39
Scn8a-207ENSMUST00000200959 Kdm5aQ3UXZ9 1690 aa12.63□□□□□ -0.39
Scn8a-207ENSMUST00000200959 IghaA0A0A6YXW6 389 aa12.62□□□□□ -0.39
Scn8a-207ENSMUST00000200959 Siglec1Q62230 1695 aa12.61□□□□□ -0.39
Scn8a-207ENSMUST00000200959 Znf526Q8BI66 675 aa12.61□□□□□ -0.39
Scn8a-207ENSMUST00000200959 Itsn1Q9Z0R4 1714 aa12.61□□□□□ -0.39
Scn8a-207ENSMUST00000200959 Adamts7Q68SA9 1657 aa12.61□□□□□ -0.39
Scn8a-207ENSMUST00000200959 Nwd1A6H603 1563 aa12.6□□□□□ -0.39
Scn8a-207ENSMUST00000200959 Txndc2Q6P902 515 aa12.6□□□□□ -0.39
Scn8a-207ENSMUST00000200959 Bcl2l12Q9D3J3 255 aa12.6□□□□□ -0.39
Scn8a-207ENSMUST00000200959 Naip1Q9QWK5 1403 aa12.6□□□□□ -0.39
Scn8a-207ENSMUST00000200959 Mast1Q9R1L5 1570 aa12.6□□□□□ -0.39
Scn8a-207ENSMUST00000200959 Lmtk2Q3TYD6 1471 aa12.59□□□□□ -0.39
Scn8a-207ENSMUST00000200959 Ggt6Q6PDE7 497 aa12.59□□□□□ -0.39
Scn8a-207ENSMUST00000200959 Robo1O89026 1612 aa12.59□□□□□ -0.39
Scn8a-207ENSMUST00000200959 Prdm16A2A935 1275 aa12.58□□□□□ -0.4
Scn8a-207ENSMUST00000200959 Myo3aQ8K3H5 1613 aa12.58□□□□□ -0.4
Scn8a-207ENSMUST00000200959 Spag9Q58A65 1321 aaKnown RBP12.58□□□□□ -0.4
Scn8a-207ENSMUST00000200959 Zfp142G5E869 1843 aa12.56□□□□□ -0.4
Scn8a-207ENSMUST00000200959 Slain2Q8CI08 581 aa12.55□□□□□ -0.4
Scn8a-207ENSMUST00000200959 Arap3Q8R5G7 1538 aa12.55□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms