RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Rrp7aQ9D1C9 280 aaKnown RBP15.27■□□□□ 0.04
Lig1-211ENSMUST00000177588 Znf608Q56A10 1511 aa15.27■□□□□ 0.03
Lig1-211ENSMUST00000177588 Trpm2Q91YD4 1506 aa15.27■□□□□ 0.03
Lig1-211ENSMUST00000177588 Kiaa1210E9Q0C6 1637 aa15.27■□□□□ 0.03
Lig1-211ENSMUST00000177588 Dapk1Q80YE7 1442 aa15.27■□□□□ 0.03
Lig1-211ENSMUST00000177588 Trappc8E9PWG2 1437 aa15.26■□□□□ 0.03
Lig1-211ENSMUST00000177588 Neurl4Q5NCX5 1563 aa15.26■□□□□ 0.03
Lig1-211ENSMUST00000177588 Myom3A2ABU4 1439 aa15.26■□□□□ 0.03
Lig1-211ENSMUST00000177588 Pdcd11Q6NS46 1862 aaKnown RBP15.25■□□□□ 0.03
Lig1-211ENSMUST00000177588 L3mbtl2P59178 703 aa15.25■□□□□ 0.03
Lig1-211ENSMUST00000177588 Naip6Q9JIB6 1403 aa15.24■□□□□ 0.03
Lig1-211ENSMUST00000177588 Slc4a3P16283 1227 aa15.24■□□□□ 0.03
Lig1-211ENSMUST00000177588 Mug2P28666 1451 aa15.23■□□□□ 0.03
Lig1-211ENSMUST00000177588 Wdr7Q920I9 1489 aa15.23■□□□□ 0.03
Lig1-211ENSMUST00000177588 Dhx9O70133 1380 aaKnown RBP15.22■□□□□ 0.03
Lig1-211ENSMUST00000177588 Rundc1Q0VDN7 615 aa15.22■□□□□ 0.03
Lig1-211ENSMUST00000177588 Mast1Q9R1L5 1570 aa15.21■□□□□ 0.03
Lig1-211ENSMUST00000177588 Supt6hQ62383 1726 aaKnown RBP15.21■□□□□ 0.03
Lig1-211ENSMUST00000177588 DroshaQ5HZJ0 1373 aaKnown RBP15.21■□□□□ 0.03
Lig1-211ENSMUST00000177588 Rgl3Q3UYI5 709 aa15.21■□□□□ 0.03
Lig1-211ENSMUST00000177588 Fmn2Q9JL04 1578 aa15.21■□□□□ 0.03
Lig1-211ENSMUST00000177588 Tcerg1Q8CGF7 1100 aaKnown RBP15.2■□□□□ 0.02
Lig1-211ENSMUST00000177588 Rnf17Q99MV7 1640 aa15.2■□□□□ 0.02
Lig1-211ENSMUST00000177588 Kcnh8P59111 1102 aa15.2■□□□□ 0.02
Lig1-211ENSMUST00000177588 Abca8bQ8K440 1620 aa15.19■□□□□ 0.02
Lig1-211ENSMUST00000177588 Ccdc27Q3V036 639 aa15.19■□□□□ 0.02
Lig1-211ENSMUST00000177588 Ipo9Q91YE6 1041 aa15.19■□□□□ 0.02
Lig1-211ENSMUST00000177588 Hecw1Q8K4P8 1604 aa15.19■□□□□ 0.02
Lig1-211ENSMUST00000177588 Nup155Q99P88 1391 aaKnown RBP15.19■□□□□ 0.02
Lig1-211ENSMUST00000177588 PrkcshO08795 521 aa15.19■□□□□ 0.02
Lig1-211ENSMUST00000177588 Gm156Q58A37 223 aa15.19■□□□□ 0.02
Lig1-211ENSMUST00000177588 Cep170Q6A065 1588 aa15.18■□□□□ 0.02
Lig1-211ENSMUST00000177588 Map4P27546 1125 aaKnown RBP15.18■□□□□ 0.02
Lig1-211ENSMUST00000177588 AI481877A2ALV5 1481 aa15.18■□□□□ 0.02
Lig1-211ENSMUST00000177588 Ttll5Q8CHB8 1328 aa15.18■□□□□ 0.02
Lig1-211ENSMUST00000177588 Lrrc9Q8CDN9 1456 aa15.18■□□□□ 0.02
Lig1-211ENSMUST00000177588 Trak1Q6PD31 939 aa15.18■□□□□ 0.02
Lig1-211ENSMUST00000177588 Card11Q8CIS0 1159 aa15.17■□□□□ 0.02
Lig1-211ENSMUST00000177588 Gm32742A0A1B0GT42 1604 aa15.17■□□□□ 0.02
Lig1-211ENSMUST00000177588 Cfap74Q3UY96 1578 aa15.15■□□□□ 0.02
Lig1-211ENSMUST00000177588 Cdk13Q69ZA1 1511 aaKnown RBP15.14■□□□□ 0.01
Lig1-211ENSMUST00000177588 Kank1E9Q238 1360 aa15.14■□□□□ 0.01
Lig1-211ENSMUST00000177588 RalgapbQ8BQZ4 1484 aa15.13■□□□□ 0.01
Lig1-211ENSMUST00000177588 Upf2A2AT37 1269 aaKnown RBP15.13■□□□□ 0.01
Lig1-211ENSMUST00000177588 Clstn2Q9ER65 966 aa15.13■□□□□ 0.01
Lig1-211ENSMUST00000177588 Map3k5O35099 1380 aa15.13■□□□□ 0.01
Lig1-211ENSMUST00000177588 Erbb3Q61526 1339 aa15.12■□□□□ 0.01
Lig1-211ENSMUST00000177588 Mink1Q9JM52 1308 aa15.12■□□□□ 0.01
Lig1-211ENSMUST00000177588 Adgrl2Q8JZZ7 1487 aa15.11■□□□□ 0.01
Lig1-211ENSMUST00000177588 Iqgap1Q9JKF1 1657 aaKnown RBP15.11■□□□□ 0.01
Lig1-211ENSMUST00000177588 Ssh2Q5SW75 1423 aa15.11■□□□□ 0.01
Lig1-211ENSMUST00000177588 Rock2P70336 1388 aa15.11■□□□□ 0.01
Lig1-211ENSMUST00000177588 Lemd3Q9WU40 921 aa15.1■□□□□ 0.01
Lig1-211ENSMUST00000177588 Abcc3B2RX12 1523 aa15.1■□□□□ 0.01
Lig1-211ENSMUST00000177588 Prdm16A2A935 1275 aa15.1■□□□□ 0.01
Lig1-211ENSMUST00000177588 Cpsf1Q9EPU4 1441 aaKnown RBP15.09■□□□□ 0.01
Lig1-211ENSMUST00000177588 Spag9Q58A65 1321 aaKnown RBP15.09■□□□□ 0.01
Lig1-211ENSMUST00000177588 Grwd1Q810D6 446 aaKnown RBP15.08■□□□□ 0.01
Lig1-211ENSMUST00000177588 Zfyve16Q80U44 1528 aa15.07■□□□□ 0
Lig1-211ENSMUST00000177588 Rpgrip1lQ8CG73 1264 aa15.06■□□□□ 0
Lig1-211ENSMUST00000177588 Setd1aE9PYH6 1716 aa15.05■□□□□ 0
Lig1-211ENSMUST00000177588 Tubgcp6G5E8P0 1769 aa15.05■□□□□ -0
Lig1-211ENSMUST00000177588 Cdc42bpbQ7TT50 1713 aa15.05■□□□□ -0
Lig1-211ENSMUST00000177588 Zfp444Q3TDV8 331 aaKnown RBP15.04■□□□□ -0
Lig1-211ENSMUST00000177588 Polr3aB2RXC6 1390 aa15.04■□□□□ -0
Lig1-211ENSMUST00000177588 Kidins220E9Q9B7 1793 aa15.04■□□□□ -0
Lig1-211ENSMUST00000177588 Ttbk1Q6PCN3 1308 aa15.04■□□□□ -0
Lig1-211ENSMUST00000177588 Adgrl3Q80TS3 1537 aa15.03■□□□□ -0
Lig1-211ENSMUST00000177588 Asxl1P59598 1514 aa15.03■□□□□ -0
Lig1-211ENSMUST00000177588 Zscan21Q07231 555 aa15.03■□□□□ -0
Lig1-211ENSMUST00000177588 Abca17E9PX95 1733 aa15.02□□□□□ -0.01
Lig1-211ENSMUST00000177588 Pde4cQ3UEI1 686 aa15.02□□□□□ -0.01
Lig1-211ENSMUST00000177588 Prkrip1Q9CWV6 186 aaKnown RBP15.02□□□□□ -0.01
Lig1-211ENSMUST00000177588 Dot1lQ6XZL8 1540 aa15.02□□□□□ -0.01
Lig1-211ENSMUST00000177588 Mak16Q8BGS0 296 aaKnown RBP15.01□□□□□ -0.01
Lig1-211ENSMUST00000177588 TnikP83510 1323 aa15.01□□□□□ -0.01
Lig1-211ENSMUST00000177588 Kif3bQ61771 747 aa15.01□□□□□ -0.01
Lig1-211ENSMUST00000177588 Hdac5Q9Z2V6 1113 aa15.01□□□□□ -0.01
Lig1-211ENSMUST00000177588 Ppp1r18Q8BQ30 594 aa15□□□□□ -0.01
Lig1-211ENSMUST00000177588 Ccdc9Q8VC31 543 aaKnown RBP15□□□□□ -0.01
Lig1-211ENSMUST00000177588 Kdm5cP41230 1554 aa14.99□□□□□ -0.01
Lig1-211ENSMUST00000177588 Abca9Q8K449 1623 aa14.99□□□□□ -0.01
Lig1-211ENSMUST00000177588 Cd109Q8R422 1442 aa14.99□□□□□ -0.01
Lig1-211ENSMUST00000177588 NeflP08551 543 aa14.99□□□□□ -0.01
Lig1-211ENSMUST00000177588 Ak9G3UYQ4 1894 aa14.99□□□□□ -0.01
Lig1-211ENSMUST00000177588 Iqcf3Q9D498 203 aa14.98□□□□□ -0.01
Lig1-211ENSMUST00000177588 Anp32bQ9EST5 272 aaKnown RBP14.98□□□□□ -0.01
Lig1-211ENSMUST00000177588 PtprgQ05909 1442 aa14.98□□□□□ -0.01
Lig1-211ENSMUST00000177588 Hsp90aa1P07901 733 aaKnown RBP14.98□□□□□ -0.01
Lig1-211ENSMUST00000177588 Q7TT23 1179 aa14.97□□□□□ -0.01
Lig1-211ENSMUST00000177588 Rock1P70335 1354 aa14.97□□□□□ -0.01
Lig1-211ENSMUST00000177588 Zmym4A2A791 1549 aaKnown RBP14.96□□□□□ -0.02
Lig1-211ENSMUST00000177588 Robo2Q7TPD3 1470 aa14.95□□□□□ -0.02
Lig1-211ENSMUST00000177588 Erich6D3Z6S9 713 aa14.95□□□□□ -0.02
Lig1-211ENSMUST00000177588 Tarbp1E9Q368 1579 aa14.94□□□□□ -0.02
Lig1-211ENSMUST00000177588 OvosQ3UU35 1456 aa14.94□□□□□ -0.02
Lig1-211ENSMUST00000177588 ChgaP26339 463 aaKnown RBP14.94□□□□□ -0.02
Lig1-211ENSMUST00000177588 Ppip5k1A2ARP1 1436 aa14.93□□□□□ -0.02
Lig1-211ENSMUST00000177588 Atp7aQ64430 1491 aa14.93□□□□□ -0.02
Lig1-211ENSMUST00000177588 Usp54Q8BL06 1588 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms