RNA–Protein interactions for RNA: ENSMUST00000173243.7

Ccdc28a-203, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-203ENSMUST00000173243 RictorQ6QI06 1708 aa18.59■□□□□ 0.57
Ccdc28a-203ENSMUST00000173243 Ssh2Q5SW75 1423 aa18.58■□□□□ 0.57
Ccdc28a-203ENSMUST00000173243 Usp54Q8BL06 1588 aaKnown RBP18.58■□□□□ 0.56
Ccdc28a-203ENSMUST00000173243 Vps8Q0P5W1 1427 aa18.57■□□□□ 0.56
Ccdc28a-203ENSMUST00000173243 UbtfP25976 765 aaKnown RBP18.56■□□□□ 0.56
Ccdc28a-203ENSMUST00000173243 Naip5Q9R016 1403 aa18.56■□□□□ 0.56
Ccdc28a-203ENSMUST00000173243 Knl1Q66JQ7 1612 aa18.56■□□□□ 0.56
Ccdc28a-203ENSMUST00000173243 CltcQ68FD5 1675 aaKnown RBP18.55■□□□□ 0.56
Ccdc28a-203ENSMUST00000173243 NclP09405 707 aaKnown RBP18.55■□□□□ 0.56
Ccdc28a-203ENSMUST00000173243 Dip2bQ3UH60 1574 aa18.55■□□□□ 0.56
Ccdc28a-203ENSMUST00000173243 ShprhQ7TPQ3 1674 aa18.54■□□□□ 0.56
Ccdc28a-203ENSMUST00000173243 Cyb5rlB1AS42 316 aa18.54■□□□□ 0.56
Ccdc28a-203ENSMUST00000173243 MyclP10166 368 aa18.54■□□□□ 0.56
Ccdc28a-203ENSMUST00000173243 Myo5cE9Q1F5 1742 aa18.54■□□□□ 0.56
Ccdc28a-203ENSMUST00000173243 Kif1bQ60575 1816 aaKnown RBP18.53■□□□□ 0.56
Ccdc28a-203ENSMUST00000173243 Ahdc1Q6PAL7 1594 aaKnown RBP18.52■□□□□ 0.56
Ccdc28a-203ENSMUST00000173243 Bcl9Q9D219 1425 aa18.51■□□□□ 0.55
Ccdc28a-203ENSMUST00000173243 Mia2Q91ZV0 1396 aa18.51■□□□□ 0.55
Ccdc28a-203ENSMUST00000173243 Arhgap23Q69ZH9 1483 aa18.5■□□□□ 0.55
Ccdc28a-203ENSMUST00000173243 Fam50aQ9WV03 339 aaKnown RBP18.49■□□□□ 0.55
Ccdc28a-203ENSMUST00000173243 Med14A2ABV5 1459 aaKnown RBP18.49■□□□□ 0.55
Ccdc28a-203ENSMUST00000173243 Adamts7Q68SA9 1657 aa18.48■□□□□ 0.55
Ccdc28a-203ENSMUST00000173243 4930407I10RikD3Z5T8 1512 aa18.48■□□□□ 0.55
Ccdc28a-203ENSMUST00000173243 Ercc6l2Q9JIM3 1537 aa18.47■□□□□ 0.55
Ccdc28a-203ENSMUST00000173243 Clstn2Q9ER65 966 aa18.46■□□□□ 0.55
Ccdc28a-203ENSMUST00000173243 Prex1Q69ZK0 1650 aa18.45■□□□□ 0.54
Ccdc28a-203ENSMUST00000173243 Pde4cQ3UEI1 686 aa18.44■□□□□ 0.54
Ccdc28a-203ENSMUST00000173243 AlkP97793 1621 aa18.44■□□□□ 0.54
Ccdc28a-203ENSMUST00000173243 Fhad1A6PWD2 1420 aa18.43■□□□□ 0.54
Ccdc28a-203ENSMUST00000173243 Topaz1E5FYH1 1653 aa18.41■□□□□ 0.54
Ccdc28a-203ENSMUST00000173243 Robo2Q7TPD3 1470 aa18.41■□□□□ 0.54
Ccdc28a-203ENSMUST00000173243 Hfm1D3Z4R1 1434 aa18.4■□□□□ 0.54
Ccdc28a-203ENSMUST00000173243 Abcc6Q9R1S7 1498 aa18.39■□□□□ 0.53
Ccdc28a-203ENSMUST00000173243 Nup155Q99P88 1391 aaKnown RBP18.38■□□□□ 0.53
Ccdc28a-203ENSMUST00000173243 Tmem131lQ3U3D7 1597 aa18.38■□□□□ 0.53
Ccdc28a-203ENSMUST00000173243 Map4P27546 1125 aaKnown RBP18.36■□□□□ 0.53
Ccdc28a-203ENSMUST00000173243 Ylpm1Q9R0I7 1386 aaKnown RBP18.36■□□□□ 0.53
Ccdc28a-203ENSMUST00000173243 Zbtb7cQ8VCZ7 619 aa18.35■□□□□ 0.53
Ccdc28a-203ENSMUST00000173243 AnkarA2RT91 1465 aa18.34■□□□□ 0.53
Ccdc28a-203ENSMUST00000173243 Hnrnpul2Q00PI9 745 aaKnown RBP18.34■□□□□ 0.53
Ccdc28a-203ENSMUST00000173243 Kdm5aQ3UXZ9 1690 aa18.33■□□□□ 0.52
Ccdc28a-203ENSMUST00000173243 Akap12Q9WTQ5 1684 aa18.33■□□□□ 0.52
Ccdc28a-203ENSMUST00000173243 Nsd2Q8BVE8 1365 aa18.32■□□□□ 0.52
Ccdc28a-203ENSMUST00000173243 Asxl1P59598 1514 aa18.32■□□□□ 0.52
Ccdc28a-203ENSMUST00000173243 Dip2aQ8BWT5 1523 aa18.32■□□□□ 0.52
Ccdc28a-203ENSMUST00000173243 Myom3A2ABU4 1439 aa18.31■□□□□ 0.52
Ccdc28a-203ENSMUST00000173243 Zfp644E9QA22 1323 aa18.3■□□□□ 0.52
Ccdc28a-203ENSMUST00000173243 Ttc21bQ0HA38 1315 aa18.3■□□□□ 0.52
Ccdc28a-203ENSMUST00000173243 Gm13697A2AK42 830 aa18.3■□□□□ 0.52
Ccdc28a-203ENSMUST00000173243 GphnQ8BUV3 769 aaKnown RBP18.29■□□□□ 0.52
Ccdc28a-203ENSMUST00000173243 PtprgQ05909 1442 aa18.29■□□□□ 0.52
Ccdc28a-203ENSMUST00000173243 Chd2E9PZM4 1827 aaKnown RBP18.28■□□□□ 0.52
Ccdc28a-203ENSMUST00000173243 Adgrb3Q80ZF8 1522 aa18.27■□□□□ 0.51
Ccdc28a-203ENSMUST00000173243 Lamc1P02468 1607 aaKnown RBP18.27■□□□□ 0.51
Ccdc28a-203ENSMUST00000173243 Ttll5Q8CHB8 1328 aa18.26■□□□□ 0.51
Ccdc28a-203ENSMUST00000173243 Scn4aQ9ER60 1841 aa18.26■□□□□ 0.51
Ccdc28a-203ENSMUST00000173243 Ino80Q6ZPV2 1559 aa18.25■□□□□ 0.51
Ccdc28a-203ENSMUST00000173243 Tarbp1E9Q368 1579 aa18.25■□□□□ 0.51
Ccdc28a-203ENSMUST00000173243 Tecpr2Q3UH45 1423 aa18.24■□□□□ 0.51
Ccdc28a-203ENSMUST00000173243 Cd109Q8R422 1442 aa18.24■□□□□ 0.51
Ccdc28a-203ENSMUST00000173243 Rimbp3Q3V0F0 1606 aa18.24■□□□□ 0.51
Ccdc28a-203ENSMUST00000173243 Phlpp1Q8CHE4 1687 aa18.22■□□□□ 0.51
Ccdc28a-203ENSMUST00000173243 Skint5A7XUY5 1461 aa18.21■□□□□ 0.51
Ccdc28a-203ENSMUST00000173243 Ube2uB1AUC4 352 aa18.21■□□□□ 0.51
Ccdc28a-203ENSMUST00000173243 Ehmt2Q9Z148 1263 aaKnown RBP18.2■□□□□ 0.5
Ccdc28a-203ENSMUST00000173243 Ncoa1P70365 1447 aa18.2■□□□□ 0.5
Ccdc28a-203ENSMUST00000173243 Uggt1Q6P5E4 1551 aa18.2■□□□□ 0.5
Ccdc28a-203ENSMUST00000173243 Prdm2A2A7B5 1709 aaKnown RBP18.2■□□□□ 0.5
Ccdc28a-203ENSMUST00000173243 Iqgap3F8VQ29 1632 aa18.2■□□□□ 0.5
Ccdc28a-203ENSMUST00000173243 Kif21bQ9QXL1 1668 aa18.19■□□□□ 0.5
Ccdc28a-203ENSMUST00000173243 Ccer2J3QPU5 274 aa18.19■□□□□ 0.5
Ccdc28a-203ENSMUST00000173243 Itsn1Q9Z0R4 1714 aa18.18■□□□□ 0.5
Ccdc28a-203ENSMUST00000173243 Efcab6Q6P1E8 1516 aa18.17■□□□□ 0.5
Ccdc28a-203ENSMUST00000173243 Kif13aQ9EQW7 1749 aa18.16■□□□□ 0.5
Ccdc28a-203ENSMUST00000173243 Trak1Q6PD31 939 aa18.16■□□□□ 0.5
Ccdc28a-203ENSMUST00000173243 Ltbp4Q8K4G1 1666 aa18.15■□□□□ 0.5
Ccdc28a-203ENSMUST00000173243 Scaf11E9PZM7 1456 aaKnown RBP18.14■□□□□ 0.49
Ccdc28a-203ENSMUST00000173243 Atp7aQ64430 1491 aa18.14■□□□□ 0.49
Ccdc28a-203ENSMUST00000173243 Mphosph9A6H5Y1 991 aa18.13■□□□□ 0.49
Ccdc28a-203ENSMUST00000173243 Lmtk3Q5XJV6 1424 aa18.13■□□□□ 0.49
Ccdc28a-203ENSMUST00000173243 Rims2Q9EQZ7 1530 aa18.13■□□□□ 0.49
Ccdc28a-203ENSMUST00000173243 Hdac5Q9Z2V6 1113 aa18.12■□□□□ 0.49
Ccdc28a-203ENSMUST00000173243 Gemin5Q8BX17 1502 aaKnown RBP18.12■□□□□ 0.49
Ccdc28a-203ENSMUST00000173243 Edc4Q3UJB9 1406 aaKnown RBP18.1■□□□□ 0.49
Ccdc28a-203ENSMUST00000173243 DroshaQ5HZJ0 1373 aaKnown RBP18.1■□□□□ 0.49
Ccdc28a-203ENSMUST00000173243 Abca8aQ8K442 1620 aa18.09■□□□□ 0.49
Ccdc28a-203ENSMUST00000173243 Naip7Q9JIB3 1402 aa18.09■□□□□ 0.49
Ccdc28a-203ENSMUST00000173243 Ehbp1l1Q99MS7 1716 aa18.06■□□□□ 0.48
Ccdc28a-203ENSMUST00000173243 Pik3c2gO70167 1506 aa18.06■□□□□ 0.48
Ccdc28a-203ENSMUST00000173243 Mroh1E0CZ22 1640 aa18.05■□□□□ 0.48
Ccdc28a-203ENSMUST00000173243 ErbinQ80TH2 1402 aa18.05■□□□□ 0.48
Ccdc28a-203ENSMUST00000173243 Zc3h13E9Q784 1729 aaKnown RBP18.04■□□□□ 0.48
Ccdc28a-203ENSMUST00000173243 PplQ9R269 1755 aa18.04■□□□□ 0.48
Ccdc28a-203ENSMUST00000173243 Rprd2Q6NXI6 1469 aaKnown RBP18.03■□□□□ 0.48
Ccdc28a-203ENSMUST00000173243 Ppip5k1A2ARP1 1436 aa18.03■□□□□ 0.48
Ccdc28a-203ENSMUST00000173243 Nrxn3Q6P9K9 1571 aa18.03■□□□□ 0.48
Ccdc28a-203ENSMUST00000173243 Pip4k2bQ80XI4 416 aa18.02■□□□□ 0.48
Ccdc28a-203ENSMUST00000173243 Iqgap1Q9JKF1 1657 aaKnown RBP18.02■□□□□ 0.47
Ccdc28a-203ENSMUST00000173243 Erich6D3Z6S9 713 aa18.01■□□□□ 0.47
Ccdc28a-203ENSMUST00000173243 Eif2ak4Q9QZ05 1648 aa18.01■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 74.4 ms