RNA–Protein interactions for RNA: ENSMUST00000161455.7

Ctc1-211, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Ctc1, Length 3,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-211ENSMUST00000161455 Cfap65Q3V0B4 1847 aa14.29□□□□□ -0.12
Ctc1-211ENSMUST00000161455 Nop58Q6DFW4 536 aaKnown RBP14.28□□□□□ -0.12
Ctc1-211ENSMUST00000161455 Fhad1A6PWD2 1420 aa14.28□□□□□ -0.12
Ctc1-211ENSMUST00000161455 Abca9Q8K449 1623 aa14.27□□□□□ -0.12
Ctc1-211ENSMUST00000161455 Pkd2O35245 966 aa14.27□□□□□ -0.12
Ctc1-211ENSMUST00000161455 NpatQ8BMA5 1420 aa14.26□□□□□ -0.13
Ctc1-211ENSMUST00000161455 Gm32742A0A1B0GT42 1604 aa14.25□□□□□ -0.13
Ctc1-211ENSMUST00000161455 SafbD3YXK2 937 aaKnown RBP14.25□□□□□ -0.13
Ctc1-211ENSMUST00000161455 Vps8Q0P5W1 1427 aa14.25□□□□□ -0.13
Ctc1-211ENSMUST00000161455 Rgl3Q3UYI5 709 aa14.24□□□□□ -0.13
Ctc1-211ENSMUST00000161455 Ttll5Q8CHB8 1328 aa14.24□□□□□ -0.13
Ctc1-211ENSMUST00000161455 Abcc3B2RX12 1523 aa14.24□□□□□ -0.13
Ctc1-211ENSMUST00000161455 Kidins220E9Q9B7 1793 aa14.23□□□□□ -0.13
Ctc1-211ENSMUST00000161455 Ssh2Q5SW75 1423 aa14.23□□□□□ -0.13
Ctc1-211ENSMUST00000161455 Rsph4aQ8BYM7 716 aa14.22□□□□□ -0.13
Ctc1-211ENSMUST00000161455 Kdm3bQ6ZPY7 1562 aa14.22□□□□□ -0.13
Ctc1-211ENSMUST00000161455 NrdcQ8BHG1 1161 aa14.21□□□□□ -0.13
Ctc1-211ENSMUST00000161455 Gli2Q0VGT2 1544 aa14.21□□□□□ -0.14
Ctc1-211ENSMUST00000161455 Hspa5P20029 655 aaKnown RBP14.2□□□□□ -0.14
Ctc1-211ENSMUST00000161455 Zbtb4Q5F293 982 aa14.2□□□□□ -0.14
Ctc1-211ENSMUST00000161455 TonslQ6NZL6 1363 aa14.2□□□□□ -0.14
Ctc1-211ENSMUST00000161455 Mroh3A0A1D5RM54 893 aa14.19□□□□□ -0.14
Ctc1-211ENSMUST00000161455 SphkapQ6NSW3 1687 aa14.19□□□□□ -0.14
Ctc1-211ENSMUST00000161455 Cyb5rlB1AS42 316 aa14.19□□□□□ -0.14
Ctc1-211ENSMUST00000161455 Rfx7F8VPJ6 1459 aa14.18□□□□□ -0.14
Ctc1-211ENSMUST00000161455 Arid4bA2CG63 1314 aaKnown RBP14.18□□□□□ -0.14
Ctc1-211ENSMUST00000161455 Atp10aO54827 1508 aa14.18□□□□□ -0.14
Ctc1-211ENSMUST00000161455 Cdc42bpbQ7TT50 1713 aa14.18□□□□□ -0.14
Ctc1-211ENSMUST00000161455 Dennd4bQ3U1Y4 1499 aa14.18□□□□□ -0.14
Ctc1-211ENSMUST00000161455 Dip2cE9PWR4 1557 aa14.17□□□□□ -0.14
Ctc1-211ENSMUST00000161455 Fmn2Q9JL04 1578 aa14.17□□□□□ -0.14
Ctc1-211ENSMUST00000161455 Hecw2Q6I6G8 1578 aa14.17□□□□□ -0.14
Ctc1-211ENSMUST00000161455 Cd109Q8R422 1442 aa14.17□□□□□ -0.14
Ctc1-211ENSMUST00000161455 Grwd1Q810D6 446 aaKnown RBP14.16□□□□□ -0.14
Ctc1-211ENSMUST00000161455 Adgrl2Q8JZZ7 1487 aa14.16□□□□□ -0.14
Ctc1-211ENSMUST00000161455 Naip6Q9JIB6 1403 aa14.15□□□□□ -0.14
Ctc1-211ENSMUST00000161455 Txndc2Q6P902 515 aa14.15□□□□□ -0.14
Ctc1-211ENSMUST00000161455 Kdm2aP59997 1161 aa14.15□□□□□ -0.15
Ctc1-211ENSMUST00000161455 Znf518aB2RRF6 1478 aaKnown RBP14.14□□□□□ -0.15
Ctc1-211ENSMUST00000161455 Nsd2Q8BVE8 1365 aa14.14□□□□□ -0.15
Ctc1-211ENSMUST00000161455 Nos1Q9Z0J4 1429 aa14.13□□□□□ -0.15
Ctc1-211ENSMUST00000161455 Pdcd11Q6NS46 1862 aaKnown RBP14.12□□□□□ -0.15
Ctc1-211ENSMUST00000161455 Ttc21bQ0HA38 1315 aa14.12□□□□□ -0.15
Ctc1-211ENSMUST00000161455 Dhx9O70133 1380 aaKnown RBP14.12□□□□□ -0.15
Ctc1-211ENSMUST00000161455 RereQ80TZ9 1558 aa14.12□□□□□ -0.15
Ctc1-211ENSMUST00000161455 Wdr66E9Q743 1299 aa14.11□□□□□ -0.15
Ctc1-211ENSMUST00000161455 Pip4k2bQ80XI4 416 aa14.11□□□□□ -0.15
Ctc1-211ENSMUST00000161455 Aebp2Q9Z248 504 aaKnown RBP14.11□□□□□ -0.15
Ctc1-211ENSMUST00000161455 Camsap2Q8C1B1 1461 aa14.1□□□□□ -0.15
Ctc1-211ENSMUST00000161455 Myom3A2ABU4 1439 aa14.1□□□□□ -0.15
Ctc1-211ENSMUST00000161455 Hecw1Q8K4P8 1604 aa14.1□□□□□ -0.15
Ctc1-211ENSMUST00000161455 Kdm5cP41230 1554 aa14.09□□□□□ -0.15
Ctc1-211ENSMUST00000161455 Slc24a1Q91WD8 1130 aa14.09□□□□□ -0.15
Ctc1-211ENSMUST00000161455 Plcd4Q8K3R3 807 aa14.08□□□□□ -0.15
Ctc1-211ENSMUST00000161455 Usp54Q8BL06 1588 aaKnown RBP14.08□□□□□ -0.16
Ctc1-211ENSMUST00000161455 Psme1P97371 249 aa14.08□□□□□ -0.16
Ctc1-211ENSMUST00000161455 AlkP97793 1621 aa14.07□□□□□ -0.16
Ctc1-211ENSMUST00000161455 Sall3Q62255 1320 aa14.07□□□□□ -0.16
Ctc1-211ENSMUST00000161455 ErbinQ80TH2 1402 aa14.05□□□□□ -0.16
Ctc1-211ENSMUST00000161455 Qser1A2BIE1 1698 aa14.05□□□□□ -0.16
Ctc1-211ENSMUST00000161455 Ifit1bl1D3Z6F0 470 aa14.05□□□□□ -0.16
Ctc1-211ENSMUST00000161455 Usp47Q8BY87 1376 aa14.05□□□□□ -0.16
Ctc1-211ENSMUST00000161455 Mast1Q9R1L5 1570 aa14.05□□□□□ -0.16
Ctc1-211ENSMUST00000161455 Naip5Q9R016 1403 aa14.04□□□□□ -0.16
Ctc1-211ENSMUST00000161455 Kif14L0N7N1 1674 aaKnown RBP14.04□□□□□ -0.16
Ctc1-211ENSMUST00000161455 Kif1bQ60575 1816 aaKnown RBP14.03□□□□□ -0.16
Ctc1-211ENSMUST00000161455 Ylpm1Q9R0I7 1386 aaKnown RBP14.03□□□□□ -0.16
Ctc1-211ENSMUST00000161455 Srpk2O54781 681 aaKnown RBP14.03□□□□□ -0.16
Ctc1-211ENSMUST00000161455 Ppargc1bQ8VHJ7 1014 aa14.02□□□□□ -0.17
Ctc1-211ENSMUST00000161455 Gtf3c3Q3TMP1 882 aa14.02□□□□□ -0.17
Ctc1-211ENSMUST00000161455 Gm20521D3Z5F7 333 aa14.01□□□□□ -0.17
Ctc1-211ENSMUST00000161455 Cdc42bpgQ80UW5 1551 aa14□□□□□ -0.17
Ctc1-211ENSMUST00000161455 Xrn1P97789 1719 aaKnown RBP14□□□□□ -0.17
Ctc1-211ENSMUST00000161455 Cul9Q80TT8 1865 aa14□□□□□ -0.17
Ctc1-211ENSMUST00000161455 Atp7aQ64430 1491 aa14□□□□□ -0.17
Ctc1-211ENSMUST00000161455 GphnQ8BUV3 769 aaKnown RBP13.99□□□□□ -0.17
Ctc1-211ENSMUST00000161455 Stk26Q99JT2 416 aa13.99□□□□□ -0.17
Ctc1-211ENSMUST00000161455 Plch2A2AP18 1501 aa13.97□□□□□ -0.17
Ctc1-211ENSMUST00000161455 Neurl4Q5NCX5 1563 aa13.97□□□□□ -0.17
Ctc1-211ENSMUST00000161455 Fhod3Q76LL6 1578 aa13.97□□□□□ -0.17
Ctc1-211ENSMUST00000161455 Hfm1D3Z4R1 1434 aa13.97□□□□□ -0.17
Ctc1-211ENSMUST00000161455 Shq1Q7TMX5 569 aa13.97□□□□□ -0.17
Ctc1-211ENSMUST00000161455 Rtl5Q5DTT4 599 aa13.96□□□□□ -0.18
Ctc1-211ENSMUST00000161455 Fan1Q69ZT1 1020 aa13.96□□□□□ -0.18
Ctc1-211ENSMUST00000161455 Ankrd36D3Z4K0 1415 aa13.95□□□□□ -0.18
Ctc1-211ENSMUST00000161455 Kiaa0556Q8C753 1610 aa13.95□□□□□ -0.18
Ctc1-211ENSMUST00000161455 Trpm2Q91YD4 1506 aa13.94□□□□□ -0.18
Ctc1-211ENSMUST00000161455 Q9D9H8 365 aa13.94□□□□□ -0.18
Ctc1-211ENSMUST00000161455 ShprhQ7TPQ3 1674 aa13.93□□□□□ -0.18
Ctc1-211ENSMUST00000161455 ClspnQ80YR7 1315 aa13.93□□□□□ -0.18
Ctc1-211ENSMUST00000161455 PtprgQ05909 1442 aa13.92□□□□□ -0.18
Ctc1-211ENSMUST00000161455 DroshaQ5HZJ0 1373 aaKnown RBP13.92□□□□□ -0.18
Ctc1-211ENSMUST00000161455 CltcQ68FD5 1675 aaKnown RBP13.92□□□□□ -0.18
Ctc1-211ENSMUST00000161455 Supt6hQ62383 1726 aaKnown RBP13.92□□□□□ -0.18
Ctc1-211ENSMUST00000161455 Talpid3E9PV87 1520 aa13.92□□□□□ -0.18
Ctc1-211ENSMUST00000161455 Abca6Q8K441 1624 aa13.91□□□□□ -0.18
Ctc1-211ENSMUST00000161455 Zmym4A2A791 1549 aaKnown RBP13.9□□□□□ -0.18
Ctc1-211ENSMUST00000161455 Washc2Q6PGL7 1334 aa13.9□□□□□ -0.18
Ctc1-211ENSMUST00000161455 Anp32aO35381 247 aa13.9□□□□□ -0.18
Ctc1-211ENSMUST00000161455 Prdm10Q3UTQ7 1184 aa13.89□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 9.2 ms