RNA–Protein interactions for RNA: ENSMUST00000147044.3

Trim3-205, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 2,972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-205ENSMUST00000147044 Pik3c2gO70167 1506 aa20.68■□□□□ 0.9
Trim3-205ENSMUST00000147044 Prdm10Q3UTQ7 1184 aa20.67■□□□□ 0.9
Trim3-205ENSMUST00000147044 Camsap2Q8C1B1 1461 aa20.66■□□□□ 0.9
Trim3-205ENSMUST00000147044 Os9Q8K2C7 672 aa20.65■□□□□ 0.9
Trim3-205ENSMUST00000147044 Mroh3A0A1D5RM54 893 aa20.65■□□□□ 0.9
Trim3-205ENSMUST00000147044 Cdc42bpbQ7TT50 1713 aa20.64■□□□□ 0.9
Trim3-205ENSMUST00000147044 Cdk13Q69ZA1 1511 aaKnown RBP20.64■□□□□ 0.9
Trim3-205ENSMUST00000147044 Ppp1r18Q8BQ30 594 aa20.64■□□□□ 0.89
Trim3-205ENSMUST00000147044 Atp7aQ64430 1491 aa20.63■□□□□ 0.89
Trim3-205ENSMUST00000147044 Clstn2Q9ER65 966 aa20.63■□□□□ 0.89
Trim3-205ENSMUST00000147044 Fmn2Q9JL04 1578 aa20.62■□□□□ 0.89
Trim3-205ENSMUST00000147044 Igf1rQ60751 1373 aa20.62■□□□□ 0.89
Trim3-205ENSMUST00000147044 Mrs2Q5NCE8 434 aa20.62■□□□□ 0.89
Trim3-205ENSMUST00000147044 Abca8bQ8K440 1620 aa20.6■□□□□ 0.89
Trim3-205ENSMUST00000147044 Ttbk1Q6PCN3 1308 aa20.6■□□□□ 0.89
Trim3-205ENSMUST00000147044 AI481877A2ALV5 1481 aa20.59■□□□□ 0.89
Trim3-205ENSMUST00000147044 Mug2P28666 1451 aa20.59■□□□□ 0.89
Trim3-205ENSMUST00000147044 Rnf17Q99MV7 1640 aa20.59■□□□□ 0.89
Trim3-205ENSMUST00000147044 Stra8P70278 393 aa20.58■□□□□ 0.89
Trim3-205ENSMUST00000147044 Trpm2Q91YD4 1506 aa20.57■□□□□ 0.88
Trim3-205ENSMUST00000147044 Cep170Q6A065 1588 aa20.57■□□□□ 0.88
Trim3-205ENSMUST00000147044 Exoc6Q8R313 802 aa20.57■□□□□ 0.88
Trim3-205ENSMUST00000147044 Eif5bQ05D44 1216 aaKnown RBP20.57■□□□□ 0.88
Trim3-205ENSMUST00000147044 Kidins220E9Q9B7 1793 aa20.55■□□□□ 0.88
Trim3-205ENSMUST00000147044 Ptch1Q61115 1434 aa20.54■□□□□ 0.88
Trim3-205ENSMUST00000147044 Tnnt3Q9QZ47 272 aa20.54■□□□□ 0.88
Trim3-205ENSMUST00000147044 Smg6P61406 1418 aaKnown RBP20.53■□□□□ 0.88
Trim3-205ENSMUST00000147044 Adgrl2Q8JZZ7 1487 aa20.53■□□□□ 0.88
Trim3-205ENSMUST00000147044 Tarbp1E9Q368 1579 aa20.52■□□□□ 0.88
Trim3-205ENSMUST00000147044 Lamc1P02468 1607 aaKnown RBP20.52■□□□□ 0.88
Trim3-205ENSMUST00000147044 Zfyve16Q80U44 1528 aa20.52■□□□□ 0.87
Trim3-205ENSMUST00000147044 Prdm16A2A935 1275 aa20.52■□□□□ 0.87
Trim3-205ENSMUST00000147044 SafbD3YXK2 937 aaKnown RBP20.52■□□□□ 0.87
Trim3-205ENSMUST00000147044 PtprgQ05909 1442 aa20.51■□□□□ 0.87
Trim3-205ENSMUST00000147044 Abcc3B2RX12 1523 aa20.51■□□□□ 0.87
Trim3-205ENSMUST00000147044 P3h3Q8CG70 732 aa20.5■□□□□ 0.87
Trim3-205ENSMUST00000147044 Myom3A2ABU4 1439 aa20.5■□□□□ 0.87
Trim3-205ENSMUST00000147044 Ncoa1P70365 1447 aa20.5■□□□□ 0.87
Trim3-205ENSMUST00000147044 Dot1lQ6XZL8 1540 aa20.5■□□□□ 0.87
Trim3-205ENSMUST00000147044 Usp54Q8BL06 1588 aaKnown RBP20.48■□□□□ 0.87
Trim3-205ENSMUST00000147044 Amer1Q7TS75 1132 aa20.46■□□□□ 0.87
Trim3-205ENSMUST00000147044 Cfap74Q3UY96 1578 aa20.46■□□□□ 0.87
Trim3-205ENSMUST00000147044 Abca9Q8K449 1623 aa20.45■□□□□ 0.87
Trim3-205ENSMUST00000147044 Kif21bQ9QXL1 1668 aa20.45■□□□□ 0.86
Trim3-205ENSMUST00000147044 Pprc1Q6NZN1 1644 aa20.45■□□□□ 0.86
Trim3-205ENSMUST00000147044 Fan1Q69ZT1 1020 aa20.44■□□□□ 0.86
Trim3-205ENSMUST00000147044 Depdc5P61460 1591 aa20.43■□□□□ 0.86
Trim3-205ENSMUST00000147044 Slc4a2P13808 1237 aaKnown RBP20.43■□□□□ 0.86
Trim3-205ENSMUST00000147044 Pdcd11Q6NS46 1862 aaKnown RBP20.43■□□□□ 0.86
Trim3-205ENSMUST00000147044 Znf710Q3U288 666 aa20.41■□□□□ 0.86
Trim3-205ENSMUST00000147044 Cnga1P29974 684 aa20.4■□□□□ 0.86
Trim3-205ENSMUST00000147044 Ttc21bQ0HA38 1315 aa20.4■□□□□ 0.86
Trim3-205ENSMUST00000147044 Col17a1Q07563 1470 aa20.4■□□□□ 0.86
Trim3-205ENSMUST00000147044 Edc4Q3UJB9 1406 aaKnown RBP20.4■□□□□ 0.86
Trim3-205ENSMUST00000147044 Atp1b4Q99ME6 356 aa20.4■□□□□ 0.86
Trim3-205ENSMUST00000147044 Ak9G3UYQ4 1894 aa20.39■□□□□ 0.85
Trim3-205ENSMUST00000147044 Xrn1P97789 1719 aaKnown RBP20.39■□□□□ 0.85
Trim3-205ENSMUST00000147044 Gm20521D3Z5F7 333 aa20.39■□□□□ 0.85
Trim3-205ENSMUST00000147044 Dnajc5gQ8C632 165 aa20.38■□□□□ 0.85
Trim3-205ENSMUST00000147044 NrdcQ8BHG1 1161 aa20.37■□□□□ 0.85
Trim3-205ENSMUST00000147044 Mbd5B1AYB6 1498 aa20.37■□□□□ 0.85
Trim3-205ENSMUST00000147044 ShprhQ7TPQ3 1674 aa20.37■□□□□ 0.85
Trim3-205ENSMUST00000147044 Cwc22Q8C5N3 908 aaKnown RBP20.37■□□□□ 0.85
Trim3-205ENSMUST00000147044 Inpp5dQ9ES52 1191 aa20.35■□□□□ 0.85
Trim3-205ENSMUST00000147044 Kiaa1210E9Q0C6 1637 aa20.34■□□□□ 0.85
Trim3-205ENSMUST00000147044 Yeats2Q3TUF7 1407 aa20.34■□□□□ 0.85
Trim3-205ENSMUST00000147044 Mast1Q9R1L5 1570 aa20.34■□□□□ 0.85
Trim3-205ENSMUST00000147044 OvosQ3UU35 1456 aa20.34■□□□□ 0.85
Trim3-205ENSMUST00000147044 Kif1bQ60575 1816 aaKnown RBP20.33■□□□□ 0.84
Trim3-205ENSMUST00000147044 Pank3Q8R2W9 370 aa20.33■□□□□ 0.84
Trim3-205ENSMUST00000147044 Rock2P70336 1388 aa20.32■□□□□ 0.84
Trim3-205ENSMUST00000147044 Adgrl3Q80TS3 1537 aa20.32■□□□□ 0.84
Trim3-205ENSMUST00000147044 Polr3aB2RXC6 1390 aa20.32■□□□□ 0.84
Trim3-205ENSMUST00000147044 Naip6Q9JIB6 1403 aa20.31■□□□□ 0.84
Trim3-205ENSMUST00000147044 Ecm2Q5FW85 670 aa20.31■□□□□ 0.84
Trim3-205ENSMUST00000147044 Afap1Q80YS6 731 aa20.31■□□□□ 0.84
Trim3-205ENSMUST00000147044 Slc4a1apE9PX68 744 aa20.3■□□□□ 0.84
Trim3-205ENSMUST00000147044 Nos1Q9Z0J4 1429 aa20.3■□□□□ 0.84
Trim3-205ENSMUST00000147044 Stk26Q99JT2 416 aa20.3■□□□□ 0.84
Trim3-205ENSMUST00000147044 Srcin1Q9QWI6 1250 aa20.3■□□□□ 0.84
Trim3-205ENSMUST00000147044 Srpk2O54781 681 aaKnown RBP20.29■□□□□ 0.84
Trim3-205ENSMUST00000147044 Q7TT23 1179 aa20.29■□□□□ 0.84
Trim3-205ENSMUST00000147044 Nsd2Q8BVE8 1365 aa20.29■□□□□ 0.84
Trim3-205ENSMUST00000147044 RalgapbQ8BQZ4 1484 aa20.29■□□□□ 0.84
Trim3-205ENSMUST00000147044 Rock1P70335 1354 aa20.27■□□□□ 0.84
Trim3-205ENSMUST00000147044 Adamts13Q769J6 1426 aa20.27■□□□□ 0.84
Trim3-205ENSMUST00000147044 Gm13695A2AK44 830 aa20.27■□□□□ 0.83
Trim3-205ENSMUST00000147044 Zranb1Q7M760 708 aa20.27■□□□□ 0.83
Trim3-205ENSMUST00000147044 ErbinQ80TH2 1402 aa20.27■□□□□ 0.83
Trim3-205ENSMUST00000147044 Abca6Q8K441 1624 aa20.26■□□□□ 0.83
Trim3-205ENSMUST00000147044 Hecw1Q8K4P8 1604 aa20.25■□□□□ 0.83
Trim3-205ENSMUST00000147044 Usp40Q8BWR4 1235 aa20.25■□□□□ 0.83
Trim3-205ENSMUST00000147044 Rpgrip1lQ8CG73 1264 aa20.25■□□□□ 0.83
Trim3-205ENSMUST00000147044 Rad21Q61550 635 aaKnown RBP20.25■□□□□ 0.83
Trim3-205ENSMUST00000147044 Cfap65Q3V0B4 1847 aa20.24■□□□□ 0.83
Trim3-205ENSMUST00000147044 Gli2Q0VGT2 1544 aa20.23■□□□□ 0.83
Trim3-205ENSMUST00000147044 Ylpm1Q9R0I7 1386 aaKnown RBP20.22■□□□□ 0.83
Trim3-205ENSMUST00000147044 Tulp4Q9JIL5 1547 aa20.22■□□□□ 0.83
Trim3-205ENSMUST00000147044 Robo2Q7TPD3 1470 aa20.22■□□□□ 0.83
Trim3-205ENSMUST00000147044 Abcc6Q9R1S7 1498 aa20.22■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 7.8 ms