RNA–Protein interactions for RNA: ENSMUST00000121963.2

Col6a4-201, Transcript of Collagen alpha-4(VI) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a4, Length 7,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4-201ENSMUST00000121963 B4galnt3Q6L8S8 986 aa13.62□□□□□ -0.23
Col6a4-201ENSMUST00000121963 Ccdc43Q9CR29 222 aaKnown RBP13.62□□□□□ -0.23
Col6a4-201ENSMUST00000121963 Rab11fip3Q8CHD8 1047 aa13.62□□□□□ -0.23
Col6a4-201ENSMUST00000121963 Golga2Q921M4 999 aa13.62□□□□□ -0.23
Col6a4-201ENSMUST00000121963 Gm21969J3QJZ1 289 aa13.62□□□□□ -0.23
Col6a4-201ENSMUST00000121963 Rwdd1Q9CQK7 243 aa13.62□□□□□ -0.23
Col6a4-201ENSMUST00000121963 CrebrfQ8CDG5 640 aaKnown RBP13.61□□□□□ -0.23
Col6a4-201ENSMUST00000121963 Mink1Q9JM52 1308 aa13.61□□□□□ -0.23
Col6a4-201ENSMUST00000121963 R3hcc1Q8BSI6 488 aa13.61□□□□□ -0.23
Col6a4-201ENSMUST00000121963 Smg7Q5RJH6 1138 aaKnown RBP13.61□□□□□ -0.23
Col6a4-201ENSMUST00000121963 Ccp110Q7TSH4 1004 aa13.61□□□□□ -0.23
Col6a4-201ENSMUST00000121963 Cabp1Q9JLK7 227 aa13.6□□□□□ -0.23
Col6a4-201ENSMUST00000121963 Phldb1Q6PDH0 1371 aaKnown RBP13.6□□□□□ -0.23
Col6a4-201ENSMUST00000121963 Mak16Q8BGS0 296 aaKnown RBP13.6□□□□□ -0.23
Col6a4-201ENSMUST00000121963 Tpm4Q6IRU2 248 aa13.59□□□□□ -0.23
Col6a4-201ENSMUST00000121963 Spryd3E9Q9B3 442 aa13.59□□□□□ -0.23
Col6a4-201ENSMUST00000121963 Plekhh2Q8C115 1491 aa13.58□□□□□ -0.24
Col6a4-201ENSMUST00000121963 Htatsf1Q8BGC0 757 aa13.58□□□□□ -0.24
Col6a4-201ENSMUST00000121963 Adam1bQ8R534 806 aa13.58□□□□□ -0.24
Col6a4-201ENSMUST00000121963 Srcin1Q9QWI6 1250 aa13.58□□□□□ -0.24
Col6a4-201ENSMUST00000121963 UvssaQ9D479 717 aa13.57□□□□□ -0.24
Col6a4-201ENSMUST00000121963 Slc5a4bQ91ZP4 660 aa13.56□□□□□ -0.24
Col6a4-201ENSMUST00000121963 Ttll5Q8CHB8 1328 aa13.55□□□□□ -0.24
Col6a4-201ENSMUST00000121963 Gm10471E9Q1C7 252 aa13.55□□□□□ -0.24
Col6a4-201ENSMUST00000121963 CrcpO35427 148 aa13.55□□□□□ -0.24
Col6a4-201ENSMUST00000121963 Zranb3Q6NZP1 1069 aa13.54□□□□□ -0.24
Col6a4-201ENSMUST00000121963 WrnO09053 1401 aa13.54□□□□□ -0.24
Col6a4-201ENSMUST00000121963 Cluap1Q8R3P7 413 aa13.54□□□□□ -0.24
Col6a4-201ENSMUST00000121963 Ksr2Q3UVC0 959 aa13.53□□□□□ -0.24
Col6a4-201ENSMUST00000121963 BccipQ9CWI3 316 aa13.53□□□□□ -0.24
Col6a4-201ENSMUST00000121963 Ccer1Q9CQL2 403 aa13.53□□□□□ -0.24
Col6a4-201ENSMUST00000121963 Tpm2P58774 284 aa13.52□□□□□ -0.24
Col6a4-201ENSMUST00000121963 Gsdma3Q5Y4Y6 464 aa13.52□□□□□ -0.24
Col6a4-201ENSMUST00000121963 Eif2s2Q99L45 331 aaKnown RBP13.52□□□□□ -0.24
Col6a4-201ENSMUST00000121963 Ccnb3Q810T2 1396 aa13.52□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Ccdc96Q9CR92 584 aa13.52□□□□□ -0.25
Col6a4-201ENSMUST00000121963 IkQ9Z1M8 557 aaKnown RBP13.52□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Neurod6P48986 337 aa13.51□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Wdhd1P59328 1117 aa13.51□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Fyco1Q8VDC1 1437 aa13.51□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Gm21698A0A087WQP8 267 aa13.51□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Gm21671G3UY31 267 aa13.51□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Smarce1O54941 411 aaKnown RBP13.51□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Ppp4r3bQ922R5 820 aa13.51□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Hspa5P20029 655 aaKnown RBP13.51□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Taok2Q6ZQ29 1240 aa13.51□□□□□ -0.25
Col6a4-201ENSMUST00000121963 NexnQ7TPW1 607 aa13.51□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Hdgfl1Q2VPR5 283 aa13.5□□□□□ -0.25
Col6a4-201ENSMUST00000121963 TatQ8QZR1 454 aa13.5□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Bcl2l13P59017 434 aa13.5□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Tsen2Q6P7W5 460 aa13.49□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Cc2d1aQ8K1A6 943 aa13.49□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Mphosph9A6H5Y1 991 aa13.49□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Ell2Q3UKU1 639 aa13.48□□□□□ -0.25
Col6a4-201ENSMUST00000121963 GlmnQ8BZM1 596 aa13.48□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Kdm2bQ6P1G2 1309 aa13.48□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Arid3aQ62431 601 aa13.48□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Abl1P00520 1123 aa13.47□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Stard8Q8K031 1019 aa13.47□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Gnl3lQ6PGG6 577 aaKnown RBP13.47□□□□□ -0.25
Col6a4-201ENSMUST00000121963 March6Q6ZQ89 909 aa13.47□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Usp40Q8BWR4 1235 aa13.47□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Mapk8ip1Q9WVI9 707 aa13.47□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Bicdl1A0JNT9 577 aa13.46□□□□□ -0.25
Col6a4-201ENSMUST00000121963 Cetn4Q8K4K1 168 aa13.46□□□□□ -0.26
Col6a4-201ENSMUST00000121963 Ttc5Q99LG4 440 aa13.46□□□□□ -0.26
Col6a4-201ENSMUST00000121963 Ncoa2Q61026 1462 aa13.45□□□□□ -0.26
Col6a4-201ENSMUST00000121963 Q8C5K5 320 aa13.45□□□□□ -0.26
Col6a4-201ENSMUST00000121963 GorabQ8BRM2 368 aa13.45□□□□□ -0.26
Col6a4-201ENSMUST00000121963 Znf697Q569E7 569 aa13.44□□□□□ -0.26
Col6a4-201ENSMUST00000121963 Tceal9Q9DD24 104 aa13.44□□□□□ -0.26
Col6a4-201ENSMUST00000121963 Mbd3Q9Z2D8 285 aaKnown RBP13.44□□□□□ -0.26
Col6a4-201ENSMUST00000121963 Fmn1Q05860 1466 aa13.44□□□□□ -0.26
Col6a4-201ENSMUST00000121963 Tpm3P21107 285 aaKnown RBP13.44□□□□□ -0.26
Col6a4-201ENSMUST00000121963 Arhgap35Q91YM2 1499 aa13.43□□□□□ -0.26
Col6a4-201ENSMUST00000121963 Plekhd1B2RPU2 505 aa13.43□□□□□ -0.26
Col6a4-201ENSMUST00000121963 Skap1Q3UUV5 355 aa13.43□□□□□ -0.26
Col6a4-201ENSMUST00000121963 AU015836B2RUM3 263 aa13.43□□□□□ -0.26
Col6a4-201ENSMUST00000121963 Cald1E9QA15 768 aaKnown RBP13.43□□□□□ -0.26
Col6a4-201ENSMUST00000121963 Erich6bQ9D4S6 220 aa13.42□□□□□ -0.26
Col6a4-201ENSMUST00000121963 Speer4bQ9D9F7 267 aa13.42□□□□□ -0.26
Col6a4-201ENSMUST00000121963 PtmsQ9D0J8 101 aaKnown RBP13.42□□□□□ -0.26
Col6a4-201ENSMUST00000121963 Znf704Q9ERQ3 566 aa13.42□□□□□ -0.26
Col6a4-201ENSMUST00000121963 Znf710Q3U288 666 aa13.41□□□□□ -0.26
Col6a4-201ENSMUST00000121963 Fnbp4Q6ZQ03 1031 aa13.41□□□□□ -0.26
Col6a4-201ENSMUST00000121963 CrbnQ8C7D2 445 aa13.41□□□□□ -0.26
Col6a4-201ENSMUST00000121963 ErbinQ80TH2 1402 aa13.41□□□□□ -0.26
Col6a4-201ENSMUST00000121963 Cplx2P84086 134 aa13.41□□□□□ -0.26
Col6a4-201ENSMUST00000121963 Gsto1O09131 240 aa13.41□□□□□ -0.26
Col6a4-201ENSMUST00000121963 Evc2Q8K1G2 1220 aa13.41□□□□□ -0.26
Col6a4-201ENSMUST00000121963 Mfap1aC0HKD8 439 aaKnown RBP13.41□□□□□ -0.26
Col6a4-201ENSMUST00000121963 Mfap1bC0HKD9 439 aaKnown RBP13.41□□□□□ -0.26
Col6a4-201ENSMUST00000121963 Arid4aF8VPQ2 1261 aaKnown RBP13.41□□□□□ -0.26
Col6a4-201ENSMUST00000121963 UacaQ8CGB3 1411 aa13.4□□□□□ -0.26
Col6a4-201ENSMUST00000121963 TefQ9JLC6 301 aa13.4□□□□□ -0.26
Col6a4-201ENSMUST00000121963 Zeb2Q9R0G7 1215 aa13.39□□□□□ -0.27
Col6a4-201ENSMUST00000121963 Cdca7Q9D0M2 382 aa13.39□□□□□ -0.27
Col6a4-201ENSMUST00000121963 Ccdc146E9Q9F7 977 aa13.39□□□□□ -0.27
Col6a4-201ENSMUST00000121963 Cnnm1Q0GA42 951 aa13.39□□□□□ -0.27
Col6a4-201ENSMUST00000121963 Q9D9H8 365 aa13.39□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 180.6 ms