RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Trappc8E9PWG2 1437 aa14.64□□□□□ -0.07
Prpf40b-202ENSMUST00000118287 Adgrb2Q8CGM1 1561 aa14.64□□□□□ -0.07
Prpf40b-202ENSMUST00000118287 Abca8bQ8K440 1620 aa14.63□□□□□ -0.07
Prpf40b-202ENSMUST00000118287 Slc4a2P13808 1237 aaKnown RBP14.63□□□□□ -0.07
Prpf40b-202ENSMUST00000118287 Caskin1Q6P9K8 1431 aa14.62□□□□□ -0.07
Prpf40b-202ENSMUST00000118287 Kiaa1210E9Q0C6 1637 aa14.61□□□□□ -0.07
Prpf40b-202ENSMUST00000118287 Exoc6Q8R313 802 aa14.6□□□□□ -0.07
Prpf40b-202ENSMUST00000118287 Pkd2O35245 966 aa14.6□□□□□ -0.07
Prpf40b-202ENSMUST00000118287 Rnf17Q99MV7 1640 aa14.59□□□□□ -0.07
Prpf40b-202ENSMUST00000118287 Sart1Q9Z315 806 aaKnown RBP14.59□□□□□ -0.07
Prpf40b-202ENSMUST00000118287 Rfx7F8VPJ6 1459 aa14.59□□□□□ -0.07
Prpf40b-202ENSMUST00000118287 Adgrl3Q80TS3 1537 aa14.59□□□□□ -0.07
Prpf40b-202ENSMUST00000118287 Ube2q2Q8K2Z8 378 aa14.59□□□□□ -0.07
Prpf40b-202ENSMUST00000118287 Zbtb7cQ8VCZ7 619 aa14.59□□□□□ -0.07
Prpf40b-202ENSMUST00000118287 Kdm3bQ6ZPY7 1562 aa14.58□□□□□ -0.08
Prpf40b-202ENSMUST00000118287 Usp47Q8BY87 1376 aa14.58□□□□□ -0.08
Prpf40b-202ENSMUST00000118287 Gm32742A0A1B0GT42 1604 aa14.58□□□□□ -0.08
Prpf40b-202ENSMUST00000118287 Setbp1Q9Z180 1582 aa14.58□□□□□ -0.08
Prpf40b-202ENSMUST00000118287 Liat1Q810M6 228 aa14.57□□□□□ -0.08
Prpf40b-202ENSMUST00000118287 Rbm10Q99KG3 930 aaKnown RBP14.57□□□□□ -0.08
Prpf40b-202ENSMUST00000118287 Il16O54824 1322 aa14.57□□□□□ -0.08
Prpf40b-202ENSMUST00000118287 Pprc1Q6NZN1 1644 aa14.56□□□□□ -0.08
Prpf40b-202ENSMUST00000118287 Samd1D3YXK1 519 aa14.56□□□□□ -0.08
Prpf40b-202ENSMUST00000118287 Rrp7aQ9D1C9 280 aaKnown RBP14.55□□□□□ -0.08
Prpf40b-202ENSMUST00000118287 Ak9G3UYQ4 1894 aa14.55□□□□□ -0.08
Prpf40b-202ENSMUST00000118287 Col17a1Q07563 1470 aa14.54□□□□□ -0.08
Prpf40b-202ENSMUST00000118287 Rprd2Q6NXI6 1469 aaKnown RBP14.53□□□□□ -0.08
Prpf40b-202ENSMUST00000118287 Ncoa1P70365 1447 aa14.53□□□□□ -0.08
Prpf40b-202ENSMUST00000118287 Kif21bQ9QXL1 1668 aa14.52□□□□□ -0.08
Prpf40b-202ENSMUST00000118287 Zfyve16Q80U44 1528 aa14.52□□□□□ -0.08
Prpf40b-202ENSMUST00000118287 Vgll3P85442 326 aa14.52□□□□□ -0.08
Prpf40b-202ENSMUST00000118287 Kcnh8P59111 1102 aa14.52□□□□□ -0.09
Prpf40b-202ENSMUST00000118287 AampJ3QN89 436 aa14.51□□□□□ -0.09
Prpf40b-202ENSMUST00000118287 Gm13695A2AK44 830 aa14.5□□□□□ -0.09
Prpf40b-202ENSMUST00000118287 AlkP97793 1621 aa14.5□□□□□ -0.09
Prpf40b-202ENSMUST00000118287 Map3k5O35099 1380 aa14.49□□□□□ -0.09
Prpf40b-202ENSMUST00000118287 Pdcd11Q6NS46 1862 aaKnown RBP14.49□□□□□ -0.09
Prpf40b-202ENSMUST00000118287 Cfap74Q3UY96 1578 aa14.49□□□□□ -0.09
Prpf40b-202ENSMUST00000118287 Rtn4Q99P72 1162 aaKnown RBP14.49□□□□□ -0.09
Prpf40b-202ENSMUST00000118287 Kidins220E9Q9B7 1793 aa14.49□□□□□ -0.09
Prpf40b-202ENSMUST00000118287 Taok2Q6ZQ29 1240 aa14.48□□□□□ -0.09
Prpf40b-202ENSMUST00000118287 Ofd1Q80Z25 1017 aa14.48□□□□□ -0.09
Prpf40b-202ENSMUST00000118287 Egfem1Q8C088 590 aa14.48□□□□□ -0.09
Prpf40b-202ENSMUST00000118287 Cdc42bpbQ7TT50 1713 aa14.48□□□□□ -0.09
Prpf40b-202ENSMUST00000118287 Abcc3B2RX12 1523 aa14.48□□□□□ -0.09
Prpf40b-202ENSMUST00000118287 Fmn2Q9JL04 1578 aa14.48□□□□□ -0.09
Prpf40b-202ENSMUST00000118287 Ppp1r18Q8BQ30 594 aa14.48□□□□□ -0.09
Prpf40b-202ENSMUST00000118287 Podxl2Q8CAE9 603 aa14.48□□□□□ -0.09
Prpf40b-202ENSMUST00000118287 Abca9Q8K449 1623 aa14.47□□□□□ -0.09
Prpf40b-202ENSMUST00000118287 Fbxo3Q9DC63 480 aa14.47□□□□□ -0.09
Prpf40b-202ENSMUST00000118287 Lamc1P02468 1607 aaKnown RBP14.46□□□□□ -0.09
Prpf40b-202ENSMUST00000118287 Tshz2Q68FE9 1030 aa14.46□□□□□ -0.09
Prpf40b-202ENSMUST00000118287 Ttll5Q8CHB8 1328 aa14.45□□□□□ -0.1
Prpf40b-202ENSMUST00000118287 Ipo4Q8VI75 1082 aa14.45□□□□□ -0.1
Prpf40b-202ENSMUST00000118287 Depdc5P61460 1591 aa14.45□□□□□ -0.1
Prpf40b-202ENSMUST00000118287 Pik3c2gO70167 1506 aa14.44□□□□□ -0.1
Prpf40b-202ENSMUST00000118287 Ssh2Q5SW75 1423 aa14.44□□□□□ -0.1
Prpf40b-202ENSMUST00000118287 Ccdc27Q3V036 639 aa14.44□□□□□ -0.1
Prpf40b-202ENSMUST00000118287 Nup155Q99P88 1391 aaKnown RBP14.44□□□□□ -0.1
Prpf40b-202ENSMUST00000118287 Rgl3Q3UYI5 709 aa14.43□□□□□ -0.1
Prpf40b-202ENSMUST00000118287 PnisrA2AJT4 805 aaKnown RBP14.43□□□□□ -0.1
Prpf40b-202ENSMUST00000118287 Lemd3Q9WU40 921 aa14.43□□□□□ -0.1
Prpf40b-202ENSMUST00000118287 Znf326O88291 580 aa14.42□□□□□ -0.1
Prpf40b-202ENSMUST00000118287 Map4P27546 1125 aaKnown RBP14.42□□□□□ -0.1
Prpf40b-202ENSMUST00000118287 Trak1Q6PD31 939 aa14.42□□□□□ -0.1
Prpf40b-202ENSMUST00000118287 Supt6hQ62383 1726 aaKnown RBP14.42□□□□□ -0.1
Prpf40b-202ENSMUST00000118287 Cwc22Q8C5N3 908 aaKnown RBP14.41□□□□□ -0.1
Prpf40b-202ENSMUST00000118287 Upf2A2AT37 1269 aaKnown RBP14.41□□□□□ -0.1
Prpf40b-202ENSMUST00000118287 Anp32bQ9EST5 272 aaKnown RBP14.41□□□□□ -0.1
Prpf40b-202ENSMUST00000118287 Adgrl2Q8JZZ7 1487 aa14.41□□□□□ -0.1
Prpf40b-202ENSMUST00000118287 Irx3P81067 507 aa14.41□□□□□ -0.1
Prpf40b-202ENSMUST00000118287 Mast1Q9R1L5 1570 aa14.4□□□□□ -0.1
Prpf40b-202ENSMUST00000118287 Hecw1Q8K4P8 1604 aa14.4□□□□□ -0.1
Prpf40b-202ENSMUST00000118287 L3mbtl2P59178 703 aa14.39□□□□□ -0.11
Prpf40b-202ENSMUST00000118287 Dhx9O70133 1380 aaKnown RBP14.39□□□□□ -0.11
Prpf40b-202ENSMUST00000118287 Rundc1Q0VDN7 615 aa14.38□□□□□ -0.11
Prpf40b-202ENSMUST00000118287 Spag9Q58A65 1321 aaKnown RBP14.38□□□□□ -0.11
Prpf40b-202ENSMUST00000118287 Dapk1Q80YE7 1442 aa14.38□□□□□ -0.11
Prpf40b-202ENSMUST00000118287 Plekhg5Q66T02 1073 aa14.38□□□□□ -0.11
Prpf40b-202ENSMUST00000118287 NgefQ8CHT1 710 aa14.37□□□□□ -0.11
Prpf40b-202ENSMUST00000118287 Ipo9Q91YE6 1041 aa14.37□□□□□ -0.11
Prpf40b-202ENSMUST00000118287 Zbtb4Q5F293 982 aa14.36□□□□□ -0.11
Prpf40b-202ENSMUST00000118287 Tcerg1Q8CGF7 1100 aaKnown RBP14.36□□□□□ -0.11
Prpf40b-202ENSMUST00000118287 Trpm2Q91YD4 1506 aa14.36□□□□□ -0.11
Prpf40b-202ENSMUST00000118287 Prdm16A2A935 1275 aa14.35□□□□□ -0.11
Prpf40b-202ENSMUST00000118287 Asxl1P59598 1514 aa14.35□□□□□ -0.11
Prpf40b-202ENSMUST00000118287 Card11Q8CIS0 1159 aa14.35□□□□□ -0.11
Prpf40b-202ENSMUST00000118287 Clasp1Q80TV8 1535 aaKnown RBP14.34□□□□□ -0.11
Prpf40b-202ENSMUST00000118287 Ptch1Q61115 1434 aa14.34□□□□□ -0.11
Prpf40b-202ENSMUST00000118287 OvosQ3UU35 1456 aa14.33□□□□□ -0.11
Prpf40b-202ENSMUST00000118287 Xrn1P97789 1719 aaKnown RBP14.33□□□□□ -0.12
Prpf40b-202ENSMUST00000118287 Kif3bQ61771 747 aa14.33□□□□□ -0.12
Prpf40b-202ENSMUST00000118287 Grwd1Q810D6 446 aaKnown RBP14.32□□□□□ -0.12
Prpf40b-202ENSMUST00000118287 Neurl4Q5NCX5 1563 aa14.32□□□□□ -0.12
Prpf40b-202ENSMUST00000118287 ChgaP26339 463 aaKnown RBP14.32□□□□□ -0.12
Prpf40b-202ENSMUST00000118287 Kif14L0N7N1 1674 aaKnown RBP14.31□□□□□ -0.12
Prpf40b-202ENSMUST00000118287 Pde4cQ3UEI1 686 aa14.31□□□□□ -0.12
Prpf40b-202ENSMUST00000118287 Ttc37F8VPK0 1563 aa14.3□□□□□ -0.12
Prpf40b-202ENSMUST00000118287 Usp54Q8BL06 1588 aaKnown RBP14.3□□□□□ -0.12
Prpf40b-202ENSMUST00000118287 Mbd5B1AYB6 1498 aa14.3□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms