RNA–Protein interactions for RNA: ENSMUST00000118242.7

Limch1-204, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Limch1, Length 5,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-204ENSMUST00000118242 Pdia4P08003 638 aaKnown RBP15.2■□□□□ 0.02
Limch1-204ENSMUST00000118242 Mphosph9A6H5Y1 991 aa15.19■□□□□ 0.02
Limch1-204ENSMUST00000118242 Ccar1Q8CH18 1146 aaKnown RBP15.19■□□□□ 0.02
Limch1-204ENSMUST00000118242 Exosc9Q9JHI7 438 aaKnown RBP15.18■□□□□ 0.02
Limch1-204ENSMUST00000118242 Iffo2Q8R2V2 512 aa15.18■□□□□ 0.02
Limch1-204ENSMUST00000118242 Hmgn5Q9JL35 406 aa15.17■□□□□ 0.02
Limch1-204ENSMUST00000118242 Filip1lQ6P6L0 1131 aa15.17■□□□□ 0.02
Limch1-204ENSMUST00000118242 Cdkn1cP49919 348 aa15.16■□□□□ 0.02
Limch1-204ENSMUST00000118242 Tpm3-rs7D3Z2H9 248 aa15.16■□□□□ 0.02
Limch1-204ENSMUST00000118242 Atl3Q91YH5 541 aa15.15■□□□□ 0.02
Limch1-204ENSMUST00000118242 Dixdc1Q80Y83 711 aa15.15■□□□□ 0.02
Limch1-204ENSMUST00000118242 Sh3bp5Q9Z131 463 aa15.15■□□□□ 0.02
Limch1-204ENSMUST00000118242 Zfp777B9EKF4 885 aa15.14■□□□□ 0.01
Limch1-204ENSMUST00000118242 Tmco5bQ80X59 307 aa15.14■□□□□ 0.01
Limch1-204ENSMUST00000118242 Vgll3P85442 326 aa15.13■□□□□ 0.01
Limch1-204ENSMUST00000118242 Zrsr2Q62377 462 aaKnown RBP15.13■□□□□ 0.01
Limch1-204ENSMUST00000118242 Ksr2Q3UVC0 959 aa15.12■□□□□ 0.01
Limch1-204ENSMUST00000118242 Ftsj3Q9DBE9 838 aaKnown RBP15.12■□□□□ 0.01
Limch1-204ENSMUST00000118242 Rock1P70335 1354 aa15.12■□□□□ 0.01
Limch1-204ENSMUST00000118242 Nap1l3Q794H2 544 aa15.12■□□□□ 0.01
Limch1-204ENSMUST00000118242 CrebrfQ8CDG5 640 aaKnown RBP15.12■□□□□ 0.01
Limch1-204ENSMUST00000118242 Sh3bgrQ9WUZ7 214 aa15.12■□□□□ 0.01
Limch1-204ENSMUST00000118242 Znf330Q922H9 316 aa15.11■□□□□ 0.01
Limch1-204ENSMUST00000118242 Trim55G3X8Y1 545 aa15.11■□□□□ 0.01
Limch1-204ENSMUST00000118242 Tnpo1Q8BFY9 898 aaKnown RBP15.11■□□□□ 0.01
Limch1-204ENSMUST00000118242 Trim58Q5NCC9 485 aa15.1■□□□□ 0.01
Limch1-204ENSMUST00000118242 1700019A02RikA0A087WPV9 146 aa15.1■□□□□ 0.01
Limch1-204ENSMUST00000118242 Anapc15P60007 132 aa15.1■□□□□ 0.01
Limch1-204ENSMUST00000118242 Def6Q8C2K1 630 aa15.1■□□□□ 0.01
Limch1-204ENSMUST00000118242 NcapgE9PWG6 1004 aa15.1■□□□□ 0.01
Limch1-204ENSMUST00000118242 Samd1D3YXK1 519 aa15.09■□□□□ 0.01
Limch1-204ENSMUST00000118242 Eif4g2Q62448 906 aaKnown RBP15.09■□□□□ 0.01
Limch1-204ENSMUST00000118242 KarsQ99MN1 595 aaKnown RBP15.09■□□□□ 0.01
Limch1-204ENSMUST00000118242 U2af1Q9D883 239 aaKnown RBP15.09■□□□□ 0.01
Limch1-204ENSMUST00000118242 Gse1Q3U3C9 1213 aa15.08■□□□□ 0.01
Limch1-204ENSMUST00000118242 Znhit6Q3UFB2 460 aaKnown RBP15.08■□□□□ 0.01
Limch1-204ENSMUST00000118242 Mns1Q61884 491 aa15.08■□□□□ 0.01
Limch1-204ENSMUST00000118242 Ssh1Q76I79 1042 aa15.08■□□□□ 0.01
Limch1-204ENSMUST00000118242 Rnf214Q8BFU3 668 aaKnown RBP15.08■□□□□ 0.01
Limch1-204ENSMUST00000118242 Irx6Q9ER75 438 aa15.08■□□□□ 0
Limch1-204ENSMUST00000118242 NaspQ99MD9 773 aaKnown RBP15.08■□□□□ 0
Limch1-204ENSMUST00000118242 Rassf8Q8CJ96 419 aa15.07■□□□□ 0
Limch1-204ENSMUST00000118242 Ccdc146E9Q9F7 977 aa15.06■□□□□ 0
Limch1-204ENSMUST00000118242 KinQ8K339 391 aa15.06■□□□□ 0
Limch1-204ENSMUST00000118242 Ppp2r3aB2RXC8 1150 aa15.06■□□□□ 0
Limch1-204ENSMUST00000118242 Ankrd36D3Z4K0 1415 aa15.05■□□□□ 0
Limch1-204ENSMUST00000118242 PnisrA2AJT4 805 aaKnown RBP15.05■□□□□ 0
Limch1-204ENSMUST00000118242 Pdcl2Q78Y63 240 aa15.05■□□□□ 0
Limch1-204ENSMUST00000118242 Ccer1Q9CQL2 403 aa15.05■□□□□ -0
Limch1-204ENSMUST00000118242 Stag3O70576 1240 aa15.05■□□□□ -0
Limch1-204ENSMUST00000118242 Sptbn5F6UCX4 1208 aa15.04■□□□□ -0
Limch1-204ENSMUST00000118242 Drc7Q6V3W6 876 aa15.04■□□□□ -0
Limch1-204ENSMUST00000118242 Slc4a2P13808 1237 aaKnown RBP15.04■□□□□ -0
Limch1-204ENSMUST00000118242 MecomP14404 1042 aa15.04■□□□□ -0
Limch1-204ENSMUST00000118242 Cbx1P83917 185 aaKnown RBP15.04■□□□□ -0
Limch1-204ENSMUST00000118242 Cnga1P29974 684 aa15.03■□□□□ -0
Limch1-204ENSMUST00000118242 Dcaf11Q91VU6 549 aa15.03■□□□□ -0
Limch1-204ENSMUST00000118242 Gps2Q921N8 327 aa15.03■□□□□ -0
Limch1-204ENSMUST00000118242 Nop14Q8R3N1 860 aaKnown RBP15.03■□□□□ -0
Limch1-204ENSMUST00000118242 Plekhh1Q80TI1 1356 aa15.02□□□□□ -0.01
Limch1-204ENSMUST00000118242 Tex2Q6ZPJ0 1128 aaKnown RBP15.02□□□□□ -0.01
Limch1-204ENSMUST00000118242 1700010I14RikQ7TPG0 532 aa15.01□□□□□ -0.01
Limch1-204ENSMUST00000118242 U2surpQ6NV83 1029 aaKnown RBP15.01□□□□□ -0.01
Limch1-204ENSMUST00000118242 Map4P27546 1125 aaKnown RBP15.01□□□□□ -0.01
Limch1-204ENSMUST00000118242 Tpm1P58771 284 aa15.01□□□□□ -0.01
Limch1-204ENSMUST00000118242 AcrbpQ3V140 540 aa15.01□□□□□ -0.01
Limch1-204ENSMUST00000118242 Fmn1Q05860 1466 aa15□□□□□ -0.01
Limch1-204ENSMUST00000118242 Gtf2e1Q9D0D5 440 aa15□□□□□ -0.01
Limch1-204ENSMUST00000118242 Mcm4P49717 862 aa14.99□□□□□ -0.01
Limch1-204ENSMUST00000118242 Polr3gQ6NXY9 223 aa14.99□□□□□ -0.01
Limch1-204ENSMUST00000118242 Ifit1bl1D3Z6F0 470 aa14.99□□□□□ -0.01
Limch1-204ENSMUST00000118242 Fez2Q6TYB5 348 aa14.99□□□□□ -0.01
Limch1-204ENSMUST00000118242 Cetn4Q8K4K1 168 aa14.99□□□□□ -0.01
Limch1-204ENSMUST00000118242 Zkscan1Q8BGS3 561 aaKnown RBP14.98□□□□□ -0.01
Limch1-204ENSMUST00000118242 PogkQ80TC5 607 aa14.98□□□□□ -0.01
Limch1-204ENSMUST00000118242 Usp47Q8BY87 1376 aa14.98□□□□□ -0.01
Limch1-204ENSMUST00000118242 Rrp7aQ9D1C9 280 aaKnown RBP14.98□□□□□ -0.01
Limch1-204ENSMUST00000118242 Trak1Q6PD31 939 aa14.97□□□□□ -0.01
Limch1-204ENSMUST00000118242 Olfml1Q8BSH2 233 aa14.97□□□□□ -0.01
Limch1-204ENSMUST00000118242 Arglu1Q3UL36 271 aaKnown RBP14.97□□□□□ -0.01
Limch1-204ENSMUST00000118242 PdcQ9QW08 244 aa14.97□□□□□ -0.01
Limch1-204ENSMUST00000118242 Pank3Q8R2W9 370 aa14.97□□□□□ -0.01
Limch1-204ENSMUST00000118242 Esx1O88933 382 aa14.96□□□□□ -0.01
Limch1-204ENSMUST00000118242 Rufy1Q8BIJ7 712 aa14.96□□□□□ -0.01
Limch1-204ENSMUST00000118242 Bicd2Q921C5 820 aa14.96□□□□□ -0.01
Limch1-204ENSMUST00000118242 Kif27Q7M6Z4 1394 aa14.96□□□□□ -0.02
Limch1-204ENSMUST00000118242 CastP51125 788 aa14.96□□□□□ -0.02
Limch1-204ENSMUST00000118242 NacadQ5SWP3 1504 aa14.95□□□□□ -0.02
Limch1-204ENSMUST00000118242 Chaf1aQ9QWF0 911 aa14.95□□□□□ -0.02
Limch1-204ENSMUST00000118242 Slc4a1apE9PX68 744 aa14.94□□□□□ -0.02
Limch1-204ENSMUST00000118242 Fam184aE9PW83 1143 aa14.94□□□□□ -0.02
Limch1-204ENSMUST00000118242 Trap1aP19473 224 aa14.94□□□□□ -0.02
Limch1-204ENSMUST00000118242 Ubxn4Q8VCH8 506 aa14.94□□□□□ -0.02
Limch1-204ENSMUST00000118242 Smc3Q9CW03 1217 aaKnown RBP14.94□□□□□ -0.02
Limch1-204ENSMUST00000118242 UacaQ8CGB3 1411 aa14.93□□□□□ -0.02
Limch1-204ENSMUST00000118242 Ccdc30Q8BVF4 654 aa14.93□□□□□ -0.02
Limch1-204ENSMUST00000118242 Srek1Q8BZX4 494 aaKnown RBP14.93□□□□□ -0.02
Limch1-204ENSMUST00000118242 Ccdc83Q9D4V3 305 aa14.93□□□□□ -0.02
Limch1-204ENSMUST00000118242 Dhx8A2A4P0 1244 aaKnown RBP14.93□□□□□ -0.02
Limch1-204ENSMUST00000118242 Kcnh8P59111 1102 aa14.93□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms