RNA–Protein interactions for RNA: ENSMUST00000117548.1

Hmgb1-ps2-201, mousemouse

BASIC

Gene Hmgb1-ps2, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-ps2-201ENSMUST00000117548 Ano8Q6PB70 1060 aa7.62□□□□□ -1.19
Hmgb1-ps2-201ENSMUST00000117548 Gigyf2Q6Y7W8 1291 aaKnown RBP7.62□□□□□ -1.19
Hmgb1-ps2-201ENSMUST00000117548 Pxylp1Q8BHA9 480 aa7.62□□□□□ -1.19
Hmgb1-ps2-201ENSMUST00000117548 DiexfQ8BTT6 772 aaKnown RBP7.62□□□□□ -1.19
Hmgb1-ps2-201ENSMUST00000117548 Mllt6B1AR10 1109 aa7.61□□□□□ -1.19
Hmgb1-ps2-201ENSMUST00000117548 Adam19O35674 920 aa7.61□□□□□ -1.19
Hmgb1-ps2-201ENSMUST00000117548 Scaf8Q6DID3 1268 aa7.61□□□□□ -1.19
Hmgb1-ps2-201ENSMUST00000117548 Crim1Q9JLL0 1037 aa7.61□□□□□ -1.19
Hmgb1-ps2-201ENSMUST00000117548 Rnf25Q9QZR0 456 aa7.61□□□□□ -1.19
Hmgb1-ps2-201ENSMUST00000117548 Tsr1Q5SWD9 803 aa7.6□□□□□ -1.19
Hmgb1-ps2-201ENSMUST00000117548 Tbc1d12Q6A039 696 aa7.59□□□□□ -1.19
Hmgb1-ps2-201ENSMUST00000117548 Farp1F8VPU2 1048 aa7.58□□□□□ -1.2
Hmgb1-ps2-201ENSMUST00000117548 Nkx2-3P97334 362 aa7.58□□□□□ -1.2
Hmgb1-ps2-201ENSMUST00000117548 Dkk1O54908 272 aa7.57□□□□□ -1.2
Hmgb1-ps2-201ENSMUST00000117548 Q8BT18 775 aa7.57□□□□□ -1.2
Hmgb1-ps2-201ENSMUST00000117548 Lmod2Q3UHZ5 550 aa7.56□□□□□ -1.2
Hmgb1-ps2-201ENSMUST00000117548 OplahQ8K010 1288 aa7.55□□□□□ -1.2
Hmgb1-ps2-201ENSMUST00000117548 TraipQ8VIG6 470 aa7.55□□□□□ -1.2
Hmgb1-ps2-201ENSMUST00000117548 Spaca7Q9D2S4 182 aa7.55□□□□□ -1.2
Hmgb1-ps2-201ENSMUST00000117548 Gpatch8A2A6A1 1505 aa7.55□□□□□ -1.2
Hmgb1-ps2-201ENSMUST00000117548 Rbm46P86049 533 aa7.54□□□□□ -1.2
Hmgb1-ps2-201ENSMUST00000117548 Plcd4Q8K3R3 807 aa7.54□□□□□ -1.2
Hmgb1-ps2-201ENSMUST00000117548 Pola2P33611 600 aa7.53□□□□□ -1.2
Hmgb1-ps2-201ENSMUST00000117548 Ints3Q7TPD0 1041 aaKnown RBP7.53□□□□□ -1.2
Hmgb1-ps2-201ENSMUST00000117548 Plcd3Q8K2J0 785 aa7.53□□□□□ -1.2
Hmgb1-ps2-201ENSMUST00000117548 Nudt12Q9DCN1 462 aa7.53□□□□□ -1.2
Hmgb1-ps2-201ENSMUST00000117548 March10E9PX79 788 aa7.52□□□□□ -1.21
Hmgb1-ps2-201ENSMUST00000117548 Cyp8b1O88962 500 aa7.51□□□□□ -1.21
Hmgb1-ps2-201ENSMUST00000117548 Myo1bP46735 1107 aa7.51□□□□□ -1.21
Hmgb1-ps2-201ENSMUST00000117548 SowahdQ8BY98 327 aa7.51□□□□□ -1.21
Hmgb1-ps2-201ENSMUST00000117548 Ccdc34Q3UI66 367 aa7.5□□□□□ -1.21
Hmgb1-ps2-201ENSMUST00000117548 PsdQ5DTT2 1024 aa7.5□□□□□ -1.21
Hmgb1-ps2-201ENSMUST00000117548 Gga1Q8R0H9 635 aa7.5□□□□□ -1.21
Hmgb1-ps2-201ENSMUST00000117548 FcrlaQ920A9 352 aa7.5□□□□□ -1.21
Hmgb1-ps2-201ENSMUST00000117548 Msh5Q9QUM7 833 aa7.5□□□□□ -1.21
Hmgb1-ps2-201ENSMUST00000117548 Slc5a4bQ91ZP4 660 aa7.49□□□□□ -1.21
Hmgb1-ps2-201ENSMUST00000117548 Adamts19P59509 1210 aa7.48□□□□□ -1.21
Hmgb1-ps2-201ENSMUST00000117548 Fam181bQ80VF6 417 aa7.48□□□□□ -1.21
Hmgb1-ps2-201ENSMUST00000117548 Creld1Q91XD7 420 aa7.48□□□□□ -1.21
Hmgb1-ps2-201ENSMUST00000117548 Rgs9O54828 675 aa7.47□□□□□ -1.21
Hmgb1-ps2-201ENSMUST00000117548 Pcdhgb4Q91XX6 912 aa7.47□□□□□ -1.21
Hmgb1-ps2-201ENSMUST00000117548 NptxrQ99J85 493 aa7.47□□□□□ -1.21
Hmgb1-ps2-201ENSMUST00000117548 LrgukQ9D5S7 820 aa7.47□□□□□ -1.21
Hmgb1-ps2-201ENSMUST00000117548 TsksO54887 585 aa7.46□□□□□ -1.22
Hmgb1-ps2-201ENSMUST00000117548 Rhox13F6YCR7 232 aa7.45□□□□□ -1.22
Hmgb1-ps2-201ENSMUST00000117548 Hoxa2P31245 372 aa7.45□□□□□ -1.22
Hmgb1-ps2-201ENSMUST00000117548 Col9a1Q05722 921 aa7.45□□□□□ -1.22
Hmgb1-ps2-201ENSMUST00000117548 Sulf1Q8K007 870 aa7.45□□□□□ -1.22
Hmgb1-ps2-201ENSMUST00000117548 Tfip11Q9ERA6 838 aaKnown RBP7.45□□□□□ -1.22
Hmgb1-ps2-201ENSMUST00000117548 Prpmp5E9PXN1 296 aa7.44□□□□□ -1.22
Hmgb1-ps2-201ENSMUST00000117548 Gm20503G3UZK1 150 aa7.44□□□□□ -1.22
Hmgb1-ps2-201ENSMUST00000117548 Zbtb7cQ8VCZ7 619 aa7.44□□□□□ -1.22
Hmgb1-ps2-201ENSMUST00000117548 Dsc3P55850 896 aa7.43□□□□□ -1.22
Hmgb1-ps2-201ENSMUST00000117548 4933416C03RikQ3V063 378 aa7.43□□□□□ -1.22
Hmgb1-ps2-201ENSMUST00000117548 Armc3A2AU72 881 aa7.42□□□□□ -1.22
Hmgb1-ps2-201ENSMUST00000117548 Gm20521D3Z5F7 333 aa7.42□□□□□ -1.22
Hmgb1-ps2-201ENSMUST00000117548 Axin1O35625 863 aa7.42□□□□□ -1.22
Hmgb1-ps2-201ENSMUST00000117548 Mical1Q8VDP3 1048 aa7.42□□□□□ -1.22
Hmgb1-ps2-201ENSMUST00000117548 Wdr44Q6NVE8 915 aa7.41□□□□□ -1.22
Hmgb1-ps2-201ENSMUST00000117548 ClmQ7TSN2 230 aa7.41□□□□□ -1.22
Hmgb1-ps2-201ENSMUST00000117548 Ier5lQ99J55 406 aa7.41□□□□□ -1.22
Hmgb1-ps2-201ENSMUST00000117548 Fxr2Q9WVR4 673 aaKnown RBP7.41□□□□□ -1.22
Hmgb1-ps2-201ENSMUST00000117548 4930567H17RikQ3V0K5 233 aa7.4□□□□□ -1.22
Hmgb1-ps2-201ENSMUST00000117548 MlecQ6ZQI3 291 aaKnown RBP7.4□□□□□ -1.22
Hmgb1-ps2-201ENSMUST00000117548 Lhx6Q9R1R0 363 aa7.4□□□□□ -1.22
Hmgb1-ps2-201ENSMUST00000117548 Ttll13A4Q9F6 804 aa7.39□□□□□ -1.23
Hmgb1-ps2-201ENSMUST00000117548 Large2Q5XPT3 690 aa7.39□□□□□ -1.23
Hmgb1-ps2-201ENSMUST00000117548 Pcdhb16Q91Y03 802 aa7.39□□□□□ -1.23
Hmgb1-ps2-201ENSMUST00000117548 Nckap5lQ6GQX2 1323 aa7.38□□□□□ -1.23
Hmgb1-ps2-201ENSMUST00000117548 Cep57l1Q8VDS7 400 aa7.38□□□□□ -1.23
Hmgb1-ps2-201ENSMUST00000117548 SmapQ9R0P4 181 aaKnown RBP7.38□□□□□ -1.23
Hmgb1-ps2-201ENSMUST00000117548 PrkcshO08795 521 aa7.37□□□□□ -1.23
Hmgb1-ps2-201ENSMUST00000117548 Cdv3Q4VAA2 281 aaKnown RBP7.37□□□□□ -1.23
Hmgb1-ps2-201ENSMUST00000117548 Usp46P62069 366 aa7.36□□□□□ -1.23
Hmgb1-ps2-201ENSMUST00000117548 Rccd1Q8BTU7 377 aa7.36□□□□□ -1.23
Hmgb1-ps2-201ENSMUST00000117548 Trim26Q99PN3 545 aa7.36□□□□□ -1.23
Hmgb1-ps2-201ENSMUST00000117548 Limd1Q9QXD8 668 aa7.36□□□□□ -1.23
Hmgb1-ps2-201ENSMUST00000117548 Gpc1Q9QZF2 557 aa7.36□□□□□ -1.23
Hmgb1-ps2-201ENSMUST00000117548 Kiaa1211Q5PR69 1207 aa7.35□□□□□ -1.23
Hmgb1-ps2-201ENSMUST00000117548 Chtf18Q8BIW9 969 aa7.35□□□□□ -1.23
Hmgb1-ps2-201ENSMUST00000117548 Eml3Q8VC03 897 aa7.35□□□□□ -1.23
Hmgb1-ps2-201ENSMUST00000117548 Nubp1Q9R060 320 aa7.35□□□□□ -1.23
Hmgb1-ps2-201ENSMUST00000117548 Hsd17b7O88736 334 aa7.34□□□□□ -1.23
Hmgb1-ps2-201ENSMUST00000117548 Rem2Q8VEL9 341 aa7.34□□□□□ -1.23
Hmgb1-ps2-201ENSMUST00000117548 Ppp2r2dQ925E7 453 aa7.34□□□□□ -1.23
Hmgb1-ps2-201ENSMUST00000117548 Q9CQ90 155 aa7.34□□□□□ -1.23
Hmgb1-ps2-201ENSMUST00000117548 Irx5Q9JKQ4 484 aa7.34□□□□□ -1.23
Hmgb1-ps2-201ENSMUST00000117548 Zfp777B9EKF4 885 aa7.33□□□□□ -1.24
Hmgb1-ps2-201ENSMUST00000117548 Ankrd33bQ3U0L2 486 aa7.33□□□□□ -1.24
Hmgb1-ps2-201ENSMUST00000117548 AU022751B1B0V2 589 aa7.32□□□□□ -1.24
Hmgb1-ps2-201ENSMUST00000117548 Stk11ipQ3TAA7 1072 aa7.32□□□□□ -1.24
Hmgb1-ps2-201ENSMUST00000117548 Igflr1Q3U4N7 345 aa7.32□□□□□ -1.24
Hmgb1-ps2-201ENSMUST00000117548 Abl2Q4JIM5 1182 aa7.32□□□□□ -1.24
Hmgb1-ps2-201ENSMUST00000117548 Kiaa1522A2A7S8 1013 aa7.31□□□□□ -1.24
Hmgb1-ps2-201ENSMUST00000117548 Ccdc61Q3UJV1 511 aa7.31□□□□□ -1.24
Hmgb1-ps2-201ENSMUST00000117548 Klra4Q60651 263 aa7.31□□□□□ -1.24
Hmgb1-ps2-201ENSMUST00000117548 Amer1Q7TS75 1132 aa7.3□□□□□ -1.24
Hmgb1-ps2-201ENSMUST00000117548 Q8C6G1 249 aa7.3□□□□□ -1.24
Hmgb1-ps2-201ENSMUST00000117548 SnrkQ8VDU5 748 aa7.3□□□□□ -1.24
Hmgb1-ps2-201ENSMUST00000117548 Usp3Q91W36 520 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms