RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 March6Q6ZQ89 909 aa20.41■□□□□ 0.86
Ubr3-202ENSMUST00000112251 Spag9Q58A65 1321 aaKnown RBP20.4■□□□□ 0.86
Ubr3-202ENSMUST00000112251 Aebp2Q9Z248 504 aaKnown RBP20.4■□□□□ 0.86
Ubr3-202ENSMUST00000112251 Dctn1O08788 1281 aa20.39■□□□□ 0.85
Ubr3-202ENSMUST00000112251 Stk26Q99JT2 416 aa20.38■□□□□ 0.85
Ubr3-202ENSMUST00000112251 Sox12Q04890 314 aa20.38■□□□□ 0.85
Ubr3-202ENSMUST00000112251 Ccdc96Q9CR92 584 aa20.38■□□□□ 0.85
Ubr3-202ENSMUST00000112251 Znf526Q8BI66 675 aa20.37■□□□□ 0.85
Ubr3-202ENSMUST00000112251 Nap1l3Q794H2 544 aa20.37■□□□□ 0.85
Ubr3-202ENSMUST00000112251 Sh3bgrQ9WUZ7 214 aa20.36■□□□□ 0.85
Ubr3-202ENSMUST00000112251 Pibf1E9Q6K3 756 aa20.36■□□□□ 0.85
Ubr3-202ENSMUST00000112251 Atp6v1dP57746 247 aa20.35■□□□□ 0.85
Ubr3-202ENSMUST00000112251 Slc4a10Q5DTL9 1118 aa20.35■□□□□ 0.85
Ubr3-202ENSMUST00000112251 Dixdc1Q80Y83 711 aa20.35■□□□□ 0.85
Ubr3-202ENSMUST00000112251 Birc3O08863 600 aa20.34■□□□□ 0.85
Ubr3-202ENSMUST00000112251 Dcaf1Q80TR8 1506 aa20.33■□□□□ 0.85
Ubr3-202ENSMUST00000112251 Chrna2Q91X60 512 aa20.33■□□□□ 0.84
Ubr3-202ENSMUST00000112251 Ciz1Q8VEH2 845 aa20.32■□□□□ 0.84
Ubr3-202ENSMUST00000112251 Rsph3aQ3UFY4 516 aa20.32■□□□□ 0.84
Ubr3-202ENSMUST00000112251 Hook1Q8BIL5 728 aa20.32■□□□□ 0.84
Ubr3-202ENSMUST00000112251 AppP12023 770 aa20.31■□□□□ 0.84
Ubr3-202ENSMUST00000112251 A0A1L1SQF0 893 aa20.31■□□□□ 0.84
Ubr3-202ENSMUST00000112251 Dhx16G3X8X0 1044 aaKnown RBP20.31■□□□□ 0.84
Ubr3-202ENSMUST00000112251 Fhad1A6PWD2 1420 aa20.31■□□□□ 0.84
Ubr3-202ENSMUST00000112251 Cwc15Q9JHS9 229 aaKnown RBP20.3■□□□□ 0.84
Ubr3-202ENSMUST00000112251 Gtf3c3Q3TMP1 882 aa20.3■□□□□ 0.84
Ubr3-202ENSMUST00000112251 Ralbp1Q62172 648 aa20.3■□□□□ 0.84
Ubr3-202ENSMUST00000112251 Rec8Q8C5S7 591 aa20.29■□□□□ 0.84
Ubr3-202ENSMUST00000112251 U2af1Q9D883 239 aaKnown RBP20.29■□□□□ 0.84
Ubr3-202ENSMUST00000112251 Filip1lQ6P6L0 1131 aa20.29■□□□□ 0.84
Ubr3-202ENSMUST00000112251 St18Q80TY4 1045 aa20.29■□□□□ 0.84
Ubr3-202ENSMUST00000112251 Arhgap27A2AB59 869 aa20.28■□□□□ 0.84
Ubr3-202ENSMUST00000112251 Ccp110Q7TSH4 1004 aa20.28■□□□□ 0.84
Ubr3-202ENSMUST00000112251 FosbP13346 338 aa20.28■□□□□ 0.84
Ubr3-202ENSMUST00000112251 Pknox2Q8BG99 474 aa20.27■□□□□ 0.84
Ubr3-202ENSMUST00000112251 Srek1Q8BZX4 494 aaKnown RBP20.27■□□□□ 0.84
Ubr3-202ENSMUST00000112251 Ddx11Q6AXC6 880 aa20.26■□□□□ 0.83
Ubr3-202ENSMUST00000112251 Commd10Q8JZY2 202 aa20.26■□□□□ 0.83
Ubr3-202ENSMUST00000112251 Pdcl3Q8BVF2 240 aa20.25■□□□□ 0.83
Ubr3-202ENSMUST00000112251 ChgaP26339 463 aaKnown RBP20.24■□□□□ 0.83
Ubr3-202ENSMUST00000112251 Setd5Q5XJV7 1441 aa20.24■□□□□ 0.83
Ubr3-202ENSMUST00000112251 Cplx1P63040 134 aa20.23■□□□□ 0.83
Ubr3-202ENSMUST00000112251 4933402E13RikQ9D4D2 429 aa20.22■□□□□ 0.83
Ubr3-202ENSMUST00000112251 Evc2Q8K1G2 1220 aa20.22■□□□□ 0.83
Ubr3-202ENSMUST00000112251 Golga2Q921M4 999 aa20.22■□□□□ 0.83
Ubr3-202ENSMUST00000112251 Ccar2Q8VDP4 922 aaKnown RBP20.22■□□□□ 0.83
Ubr3-202ENSMUST00000112251 Bicd2Q921C5 820 aa20.22■□□□□ 0.83
Ubr3-202ENSMUST00000112251 Fam13bQ8K2H3 851 aa20.21■□□□□ 0.83
Ubr3-202ENSMUST00000112251 HdgfP51859 237 aaKnown RBP20.21■□□□□ 0.83
Ubr3-202ENSMUST00000112251 Kcnj4P52189 445 aa20.21■□□□□ 0.83
Ubr3-202ENSMUST00000112251 Psme1P97371 249 aa20.21■□□□□ 0.83
Ubr3-202ENSMUST00000112251 Ppp4r3bQ922R5 820 aa20.2■□□□□ 0.82
Ubr3-202ENSMUST00000112251 Brd4Q9ESU6 1400 aaKnown RBP20.2■□□□□ 0.82
Ubr3-202ENSMUST00000112251 Tmf1B9EKI3 1091 aa20.2■□□□□ 0.82
Ubr3-202ENSMUST00000112251 Ccdc146E9Q9F7 977 aa20.2■□□□□ 0.82
Ubr3-202ENSMUST00000112251 Hnrnpul1Q8VDM6 859 aaKnown RBP20.19■□□□□ 0.82
Ubr3-202ENSMUST00000112251 Themis2Q91YX0 663 aa20.19■□□□□ 0.82
Ubr3-202ENSMUST00000112251 Necab1Q8BG18 352 aa20.19■□□□□ 0.82
Ubr3-202ENSMUST00000112251 Mtus2Q3UHD3 1353 aa20.18■□□□□ 0.82
Ubr3-202ENSMUST00000112251 Eif2s2Q99L45 331 aaKnown RBP20.18■□□□□ 0.82
Ubr3-202ENSMUST00000112251 Ksr2Q3UVC0 959 aa20.18■□□□□ 0.82
Ubr3-202ENSMUST00000112251 Pak3Q61036 559 aa20.17■□□□□ 0.82
Ubr3-202ENSMUST00000112251 Cnksr2Q80YA9 1032 aa20.17■□□□□ 0.82
Ubr3-202ENSMUST00000112251 Plagl1Q9JLQ4 704 aa20.17■□□□□ 0.82
Ubr3-202ENSMUST00000112251 Casq1O09165 405 aa20.17■□□□□ 0.82
Ubr3-202ENSMUST00000112251 Erich4Q3UNU4 136 aa20.16■□□□□ 0.82
Ubr3-202ENSMUST00000112251 Cep89Q9CZX2 791 aa20.16■□□□□ 0.82
Ubr3-202ENSMUST00000112251 Cplx2P84086 134 aa20.16■□□□□ 0.82
Ubr3-202ENSMUST00000112251 Chmp4cQ9D7F7 232 aa20.15■□□□□ 0.82
Ubr3-202ENSMUST00000112251 Cep164Q5DU05 1446 aa20.15■□□□□ 0.82
Ubr3-202ENSMUST00000112251 Kif3cO35066 796 aa20.14■□□□□ 0.81
Ubr3-202ENSMUST00000112251 Ylpm1Q9R0I7 1386 aaKnown RBP20.14■□□□□ 0.81
Ubr3-202ENSMUST00000112251 Gps2Q921N8 327 aa20.13■□□□□ 0.81
Ubr3-202ENSMUST00000112251 Ppp1r18Q8BQ30 594 aa20.12■□□□□ 0.81
Ubr3-202ENSMUST00000112251 Kif4P33174 1231 aa20.12■□□□□ 0.81
Ubr3-202ENSMUST00000112251 Gbp4Q61107 620 aa20.12■□□□□ 0.81
Ubr3-202ENSMUST00000112251 Mns1Q61884 491 aa20.12■□□□□ 0.81
Ubr3-202ENSMUST00000112251 Def6Q8C2K1 630 aa20.12■□□□□ 0.81
Ubr3-202ENSMUST00000112251 Gripap1Q8VD04 806 aa20.11■□□□□ 0.81
Ubr3-202ENSMUST00000112251 Tceal9Q9DD24 104 aa20.11■□□□□ 0.81
Ubr3-202ENSMUST00000112251 Gpatch3Q8BIY1 525 aa20.11■□□□□ 0.81
Ubr3-202ENSMUST00000112251 Gtf2f1Q3THK3 508 aaKnown RBP20.1■□□□□ 0.81
Ubr3-202ENSMUST00000112251 L1td1Q587J6 782 aaKnown RBP20.1■□□□□ 0.81
Ubr3-202ENSMUST00000112251 Spata24Q6P926 205 aa20.1■□□□□ 0.81
Ubr3-202ENSMUST00000112251 Glipr1l2Q9CQ35 332 aa20.1■□□□□ 0.81
Ubr3-202ENSMUST00000112251 Rfx1P48377 963 aa20.09■□□□□ 0.81
Ubr3-202ENSMUST00000112251 CrbnQ8C7D2 445 aa20.09■□□□□ 0.81
Ubr3-202ENSMUST00000112251 Erlin2Q8BFZ9 340 aa20.08■□□□□ 0.8
Ubr3-202ENSMUST00000112251 Gtf2e1Q9D0D5 440 aa20.08■□□□□ 0.8
Ubr3-202ENSMUST00000112251 Arhgef18Q6P9R4 1021 aa20.08■□□□□ 0.8
Ubr3-202ENSMUST00000112251 Rundc1Q0VDN7 615 aa20.07■□□□□ 0.8
Ubr3-202ENSMUST00000112251 Hmgn5Q9JL35 406 aa20.07■□□□□ 0.8
Ubr3-202ENSMUST00000112251 Dcaf11Q91VU6 549 aa20.07■□□□□ 0.8
Ubr3-202ENSMUST00000112251 Trim30cD3YVI9 513 aa20.07■□□□□ 0.8
Ubr3-202ENSMUST00000112251 Ifit1bl1D3Z6F0 470 aa20.06■□□□□ 0.8
Ubr3-202ENSMUST00000112251 Mad1l1Q9WTX8 717 aaKnown RBP20.05■□□□□ 0.8
Ubr3-202ENSMUST00000112251 Cc2d1aQ8K1A6 943 aa20.04■□□□□ 0.8
Ubr3-202ENSMUST00000112251 Homer1Q9Z2Y3 366 aa20.04■□□□□ 0.8
Ubr3-202ENSMUST00000112251 KinQ8K339 391 aa20.04■□□□□ 0.8
Ubr3-202ENSMUST00000112251 Secisbp2lQ6A098 1086 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 8.4 ms