RNA–Protein interactions for RNA: ENSMUST00000110302.7

Clcn3-205, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

TSL 5 BASIC

Gene Clcn3, Length 3,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-205ENSMUST00000110302 Prdm2A2A7B5 1709 aaKnown RBP12.15□□□□□ -0.46
Clcn3-205ENSMUST00000110302 Atp10aO54827 1508 aa12.14□□□□□ -0.47
Clcn3-205ENSMUST00000110302 Col17a1Q07563 1470 aa12.14□□□□□ -0.47
Clcn3-205ENSMUST00000110302 Ttc37F8VPK0 1563 aa12.13□□□□□ -0.47
Clcn3-205ENSMUST00000110302 Dhx9O70133 1380 aaKnown RBP12.13□□□□□ -0.47
Clcn3-205ENSMUST00000110302 Trpm1Q2TV84 1622 aa12.13□□□□□ -0.47
Clcn3-205ENSMUST00000110302 Cdc42bpgQ80UW5 1551 aa12.13□□□□□ -0.47
Clcn3-205ENSMUST00000110302 Ppip5k1A2ARP1 1436 aa12.12□□□□□ -0.47
Clcn3-205ENSMUST00000110302 Plch2A2AP18 1501 aa12.12□□□□□ -0.47
Clcn3-205ENSMUST00000110302 Uggt2E9Q4X2 1504 aa12.12□□□□□ -0.47
Clcn3-205ENSMUST00000110302 AdgbG3UZ78 1657 aa12.12□□□□□ -0.47
Clcn3-205ENSMUST00000110302 Ttbk1Q6PCN3 1308 aa12.12□□□□□ -0.47
Clcn3-205ENSMUST00000110302 Znf518aB2RRF6 1478 aaKnown RBP12.11□□□□□ -0.47
Clcn3-205ENSMUST00000110302 Rock1P70335 1354 aa12.1□□□□□ -0.47
Clcn3-205ENSMUST00000110302 Ube2uB1AUC4 352 aa12.1□□□□□ -0.47
Clcn3-205ENSMUST00000110302 RereQ80TZ9 1558 aa12.1□□□□□ -0.47
Clcn3-205ENSMUST00000110302 Gm13697A2AK42 830 aa12.09□□□□□ -0.47
Clcn3-205ENSMUST00000110302 Tarbp1E9Q368 1579 aa12.09□□□□□ -0.47
Clcn3-205ENSMUST00000110302 Map4P27546 1125 aaKnown RBP12.09□□□□□ -0.47
Clcn3-205ENSMUST00000110302 Rrp7aQ9D1C9 280 aaKnown RBP12.09□□□□□ -0.47
Clcn3-205ENSMUST00000110302 Atp7aQ64430 1491 aa12.08□□□□□ -0.48
Clcn3-205ENSMUST00000110302 Abca6Q8K441 1624 aa12.08□□□□□ -0.48
Clcn3-205ENSMUST00000110302 OvosQ3UU35 1456 aa12.08□□□□□ -0.48
Clcn3-205ENSMUST00000110302 Spag9Q58A65 1321 aaKnown RBP12.07□□□□□ -0.48
Clcn3-205ENSMUST00000110302 Prex1Q69ZK0 1650 aa12.07□□□□□ -0.48
Clcn3-205ENSMUST00000110302 Wdr66E9Q743 1299 aa12.07□□□□□ -0.48
Clcn3-205ENSMUST00000110302 Trak1Q6PD31 939 aa12.07□□□□□ -0.48
Clcn3-205ENSMUST00000110302 Ppargc1bQ8VHJ7 1014 aa12.07□□□□□ -0.48
Clcn3-205ENSMUST00000110302 Cd109Q8R422 1442 aa12.07□□□□□ -0.48
Clcn3-205ENSMUST00000110302 Dip2cE9PWR4 1557 aa12.07□□□□□ -0.48
Clcn3-205ENSMUST00000110302 Clstn2Q9ER65 966 aa12.07□□□□□ -0.48
Clcn3-205ENSMUST00000110302 Map3k5O35099 1380 aa12.07□□□□□ -0.48
Clcn3-205ENSMUST00000110302 Depdc5P61460 1591 aa12.06□□□□□ -0.48
Clcn3-205ENSMUST00000110302 Cpsf1Q9EPU4 1441 aaKnown RBP12.06□□□□□ -0.48
Clcn3-205ENSMUST00000110302 Mug2P28666 1451 aa12.06□□□□□ -0.48
Clcn3-205ENSMUST00000110302 Akap12Q9WTQ5 1684 aa12.06□□□□□ -0.48
Clcn3-205ENSMUST00000110302 AnkarA2RT91 1465 aa12.06□□□□□ -0.48
Clcn3-205ENSMUST00000110302 Iqgap3F8VQ29 1632 aa12.05□□□□□ -0.48
Clcn3-205ENSMUST00000110302 Abca8aQ8K442 1620 aa12.04□□□□□ -0.48
Clcn3-205ENSMUST00000110302 Edc4Q3UJB9 1406 aaKnown RBP12.04□□□□□ -0.48
Clcn3-205ENSMUST00000110302 Hecw2Q6I6G8 1578 aa12.04□□□□□ -0.48
Clcn3-205ENSMUST00000110302 Arid3cA6PWV5 409 aa12.03□□□□□ -0.48
Clcn3-205ENSMUST00000110302 Myom3A2ABU4 1439 aa12.03□□□□□ -0.48
Clcn3-205ENSMUST00000110302 Adamts13Q769J6 1426 aa12.03□□□□□ -0.48
Clcn3-205ENSMUST00000110302 Ylpm1Q9R0I7 1386 aaKnown RBP12.01□□□□□ -0.49
Clcn3-205ENSMUST00000110302 Ehbp1l1Q99MS7 1716 aa12.01□□□□□ -0.49
Clcn3-205ENSMUST00000110302 Ncoa1P70365 1447 aa12.01□□□□□ -0.49
Clcn3-205ENSMUST00000110302 Setd1aE9PYH6 1716 aa12.01□□□□□ -0.49
Clcn3-205ENSMUST00000110302 Pde4cQ3UEI1 686 aa12.01□□□□□ -0.49
Clcn3-205ENSMUST00000110302 Lemd3Q9WU40 921 aa12.01□□□□□ -0.49
Clcn3-205ENSMUST00000110302 Cdk13Q69ZA1 1511 aaKnown RBP12.01□□□□□ -0.49
Clcn3-205ENSMUST00000110302 Nsd2Q8BVE8 1365 aa12□□□□□ -0.49
Clcn3-205ENSMUST00000110302 Gli2Q0VGT2 1544 aa12□□□□□ -0.49
Clcn3-205ENSMUST00000110302 RalgapbQ8BQZ4 1484 aa12□□□□□ -0.49
Clcn3-205ENSMUST00000110302 Ifnlr1Q8CGK5 535 aa12□□□□□ -0.49
Clcn3-205ENSMUST00000110302 Polr3aB2RXC6 1390 aa12□□□□□ -0.49
Clcn3-205ENSMUST00000110302 Ino80Q6ZPV2 1559 aa12□□□□□ -0.49
Clcn3-205ENSMUST00000110302 Naip6Q9JIB6 1403 aa11.99□□□□□ -0.49
Clcn3-205ENSMUST00000110302 Ptch1Q61115 1434 aa11.99□□□□□ -0.49
Clcn3-205ENSMUST00000110302 Adamts7Q68SA9 1657 aa11.99□□□□□ -0.49
Clcn3-205ENSMUST00000110302 Tulp4Q9JIL5 1547 aa11.98□□□□□ -0.49
Clcn3-205ENSMUST00000110302 Tecpr2Q3UH45 1423 aa11.97□□□□□ -0.49
Clcn3-205ENSMUST00000110302 Zmym4A2A791 1549 aaKnown RBP11.97□□□□□ -0.49
Clcn3-205ENSMUST00000110302 Tubgcp6G5E8P0 1769 aa11.97□□□□□ -0.49
Clcn3-205ENSMUST00000110302 Washc2Q6PGL7 1334 aa11.97□□□□□ -0.49
Clcn3-205ENSMUST00000110302 Synj2Q9D2G5 1434 aa11.96□□□□□ -0.5
Clcn3-205ENSMUST00000110302 Adgrb3Q80ZF8 1522 aa11.95□□□□□ -0.5
Clcn3-205ENSMUST00000110302 Cep152A2AUM9 1736 aaKnown RBP11.95□□□□□ -0.5
Clcn3-205ENSMUST00000110302 Dapk1Q80YE7 1442 aa11.95□□□□□ -0.5
Clcn3-205ENSMUST00000110302 Efcab6Q6P1E8 1516 aa11.94□□□□□ -0.5
Clcn3-205ENSMUST00000110302 Sipa1l1Q8C0T5 1782 aa11.93□□□□□ -0.5
Clcn3-205ENSMUST00000110302 Abcc6Q9R1S7 1498 aa11.93□□□□□ -0.5
Clcn3-205ENSMUST00000110302 DiexfQ8BTT6 772 aaKnown RBP11.92□□□□□ -0.5
Clcn3-205ENSMUST00000110302 Uggt1Q6P5E4 1551 aa11.92□□□□□ -0.5
Clcn3-205ENSMUST00000110302 Cdk5rap2Q8K389 1822 aa11.92□□□□□ -0.5
Clcn3-205ENSMUST00000110302 Yeats2Q3TUF7 1407 aa11.91□□□□□ -0.5
Clcn3-205ENSMUST00000110302 Qser1A2BIE1 1698 aa11.91□□□□□ -0.5
Clcn3-205ENSMUST00000110302 Rgl3Q3UYI5 709 aa11.91□□□□□ -0.5
Clcn3-205ENSMUST00000110302 Kif3bQ61771 747 aa11.9□□□□□ -0.5
Clcn3-205ENSMUST00000110302 Ttc21bQ0HA38 1315 aa11.9□□□□□ -0.5
Clcn3-205ENSMUST00000110302 Sin3aQ60520 1274 aaKnown RBP11.9□□□□□ -0.51
Clcn3-205ENSMUST00000110302 Cfap65Q3V0B4 1847 aa11.89□□□□□ -0.51
Clcn3-205ENSMUST00000110302 Rims1Q99NE5 1463 aa11.89□□□□□ -0.51
Clcn3-205ENSMUST00000110302 Myom1Q62234 1667 aaKnown RBP11.89□□□□□ -0.51
Clcn3-205ENSMUST00000110302 Talpid3E9PV87 1520 aa11.89□□□□□ -0.51
Clcn3-205ENSMUST00000110302 Hdac5Q9Z2V6 1113 aa11.89□□□□□ -0.51
Clcn3-205ENSMUST00000110302 Knl1Q66JQ7 1612 aa11.88□□□□□ -0.51
Clcn3-205ENSMUST00000110302 Plxnc1Q9QZC2 1574 aa11.88□□□□□ -0.51
Clcn3-205ENSMUST00000110302 Myom2Q14BI5 1463 aa11.88□□□□□ -0.51
Clcn3-205ENSMUST00000110302 RictorQ6QI06 1708 aa11.88□□□□□ -0.51
Clcn3-205ENSMUST00000110302 Pola1P33609 1465 aa11.87□□□□□ -0.51
Clcn3-205ENSMUST00000110302 Ift172Q6VH22 1749 aa11.86□□□□□ -0.51
Clcn3-205ENSMUST00000110302 DnmbpQ6TXD4 1580 aa11.86□□□□□ -0.51
Clcn3-205ENSMUST00000110302 Plekhg5Q66T02 1073 aa11.86□□□□□ -0.51
Clcn3-205ENSMUST00000110302 Mroh1E0CZ22 1640 aa11.85□□□□□ -0.51
Clcn3-205ENSMUST00000110302 Arhgap23Q69ZH9 1483 aa11.85□□□□□ -0.51
Clcn3-205ENSMUST00000110302 Cwc22Q8C5N3 908 aaKnown RBP11.85□□□□□ -0.51
Clcn3-205ENSMUST00000110302 Itsn2Q9Z0R6 1659 aa11.85□□□□□ -0.51
Clcn3-205ENSMUST00000110302 Rundc1Q0VDN7 615 aa11.84□□□□□ -0.51
Clcn3-205ENSMUST00000110302 Rock2P70336 1388 aa11.84□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms