RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Atp10dQ8K2X1 1416 aa17.65■□□□□ 0.42
Clcn3-204ENSMUST00000110301 ErbinQ80TH2 1402 aa17.65■□□□□ 0.42
Clcn3-204ENSMUST00000110301 Wdr43Q6ZQL4 677 aaKnown RBP17.64■□□□□ 0.41
Clcn3-204ENSMUST00000110301 Smg6P61406 1418 aaKnown RBP17.64■□□□□ 0.41
Clcn3-204ENSMUST00000110301 Eif4g1Q6NZJ6 1600 aaKnown RBP17.62■□□□□ 0.41
Clcn3-204ENSMUST00000110301 Afap1Q80YS6 731 aa17.61■□□□□ 0.41
Clcn3-204ENSMUST00000110301 Irx6Q9ER75 438 aa17.61■□□□□ 0.41
Clcn3-204ENSMUST00000110301 Mlh3A0A1Y7VMP7 1443 aa17.6■□□□□ 0.41
Clcn3-204ENSMUST00000110301 Sox12Q04890 314 aa17.6■□□□□ 0.41
Clcn3-204ENSMUST00000110301 Gm156Q58A37 223 aa17.59■□□□□ 0.41
Clcn3-204ENSMUST00000110301 Plin1Q8CGN5 517 aa17.59■□□□□ 0.41
Clcn3-204ENSMUST00000110301 Mink1Q9JM52 1308 aa17.58■□□□□ 0.4
Clcn3-204ENSMUST00000110301 Trappc8E9PWG2 1437 aa17.58■□□□□ 0.4
Clcn3-204ENSMUST00000110301 Fancd2Q80V62 1450 aa17.57■□□□□ 0.4
Clcn3-204ENSMUST00000110301 Birc3O08863 600 aa17.57■□□□□ 0.4
Clcn3-204ENSMUST00000110301 Rapgef6Q5NCJ1 1609 aa17.57■□□□□ 0.4
Clcn3-204ENSMUST00000110301 Rsph4aQ8BYM7 716 aa17.57■□□□□ 0.4
Clcn3-204ENSMUST00000110301 Sall3Q62255 1320 aa17.57■□□□□ 0.4
Clcn3-204ENSMUST00000110301 Prex2Q3LAC4 1598 aa17.57■□□□□ 0.4
Clcn3-204ENSMUST00000110301 ArxO35085 564 aa17.57■□□□□ 0.4
Clcn3-204ENSMUST00000110301 Mapk8ip3Q9ESN9 1337 aa17.56■□□□□ 0.4
Clcn3-204ENSMUST00000110301 Puf60Q3UEB3 564 aaKnown RBP17.55■□□□□ 0.4
Clcn3-204ENSMUST00000110301 Speer4f1Q9D5Q6 258 aa17.55■□□□□ 0.4
Clcn3-204ENSMUST00000110301 Fam184bQ0KK56 942 aa17.54■□□□□ 0.4
Clcn3-204ENSMUST00000110301 Myom3A2ABU4 1439 aa17.54■□□□□ 0.4
Clcn3-204ENSMUST00000110301 Erich3F6QRE9 1637 aa17.54■□□□□ 0.4
Clcn3-204ENSMUST00000110301 U2af1Q9D883 239 aaKnown RBP17.54■□□□□ 0.4
Clcn3-204ENSMUST00000110301 Q9D9H8 365 aa17.54■□□□□ 0.4
Clcn3-204ENSMUST00000110301 Mak16Q8BGS0 296 aaKnown RBP17.53■□□□□ 0.4
Clcn3-204ENSMUST00000110301 Stard8Q8K031 1019 aa17.53■□□□□ 0.4
Clcn3-204ENSMUST00000110301 CrbnQ8C7D2 445 aa17.52■□□□□ 0.4
Clcn3-204ENSMUST00000110301 Caskin1Q6P9K8 1431 aa17.52■□□□□ 0.39
Clcn3-204ENSMUST00000110301 Lrriq1Q0P5X1 1673 aa17.51■□□□□ 0.39
Clcn3-204ENSMUST00000110301 Zscan10Q3URR7 782 aa17.51■□□□□ 0.39
Clcn3-204ENSMUST00000110301 Abcc1O35379 1528 aa17.5■□□□□ 0.39
Clcn3-204ENSMUST00000110301 Rfx7F8VPJ6 1459 aa17.5■□□□□ 0.39
Clcn3-204ENSMUST00000110301 1700019A02RikA0A087WPV9 146 aa17.5■□□□□ 0.39
Clcn3-204ENSMUST00000110301 CenpjQ569L8 1344 aa17.5■□□□□ 0.39
Clcn3-204ENSMUST00000110301 Arhgef40Q3UPH7 1517 aa17.5■□□□□ 0.39
Clcn3-204ENSMUST00000110301 Slc4a3P16283 1227 aa17.49■□□□□ 0.39
Clcn3-204ENSMUST00000110301 Gm6268A2A3U9 297 aa17.49■□□□□ 0.39
Clcn3-204ENSMUST00000110301 Senp3Q9EP97 568 aaKnown RBP17.48■□□□□ 0.39
Clcn3-204ENSMUST00000110301 CatipB9EKE5 520 aa17.47■□□□□ 0.39
Clcn3-204ENSMUST00000110301 Golga2Q921M4 999 aa17.47■□□□□ 0.39
Clcn3-204ENSMUST00000110301 Kif7B7ZNG0 1348 aa17.47■□□□□ 0.39
Clcn3-204ENSMUST00000110301 Rpgrip1lQ8CG73 1264 aa17.47■□□□□ 0.39
Clcn3-204ENSMUST00000110301 Washc2Q6PGL7 1334 aa17.46■□□□□ 0.39
Clcn3-204ENSMUST00000110301 Ttc21bQ0HA38 1315 aa17.46■□□□□ 0.39
Clcn3-204ENSMUST00000110301 Pknox2Q8BG99 474 aa17.46■□□□□ 0.38
Clcn3-204ENSMUST00000110301 Lmo7E9PYF4 1699 aaKnown RBP17.45■□□□□ 0.38
Clcn3-204ENSMUST00000110301 Esx1O88933 382 aa17.45■□□□□ 0.38
Clcn3-204ENSMUST00000110301 Rusc2Q80U22 1514 aa17.45■□□□□ 0.38
Clcn3-204ENSMUST00000110301 Fam71e1A1L3C1 212 aa17.44■□□□□ 0.38
Clcn3-204ENSMUST00000110301 Naip5Q9R016 1403 aa17.43■□□□□ 0.38
Clcn3-204ENSMUST00000110301 Adamts12Q811B3 1600 aa17.43■□□□□ 0.38
Clcn3-204ENSMUST00000110301 Tcerg1Q8CGF7 1100 aaKnown RBP17.42■□□□□ 0.38
Clcn3-204ENSMUST00000110301 Arhgef12Q8R4H2 1543 aaKnown RBP17.42■□□□□ 0.38
Clcn3-204ENSMUST00000110301 Adgrb2Q8CGM1 1561 aa17.42■□□□□ 0.38
Clcn3-204ENSMUST00000110301 Q7TT23 1179 aa17.42■□□□□ 0.38
Clcn3-204ENSMUST00000110301 Abca5Q8K448 1642 aa17.41■□□□□ 0.38
Clcn3-204ENSMUST00000110301 Gapvd1Q6PAR5 1458 aa17.41■□□□□ 0.38
Clcn3-204ENSMUST00000110301 Lmtk2Q3TYD6 1471 aa17.41■□□□□ 0.38
Clcn3-204ENSMUST00000110301 Slc4a2P13808 1237 aaKnown RBP17.4■□□□□ 0.38
Clcn3-204ENSMUST00000110301 Atp2b2Q9R0K7 1198 aa17.4■□□□□ 0.38
Clcn3-204ENSMUST00000110301 Rprd2Q6NXI6 1469 aaKnown RBP17.39■□□□□ 0.37
Clcn3-204ENSMUST00000110301 Dbr1Q923B1 550 aa17.39■□□□□ 0.37
Clcn3-204ENSMUST00000110301 Mapkbp1Q6NS57 1503 aa17.38■□□□□ 0.37
Clcn3-204ENSMUST00000110301 Rwdd1Q9CQK7 243 aa17.38■□□□□ 0.37
Clcn3-204ENSMUST00000110301 Adcy10Q8C0T9 1614 aa17.38■□□□□ 0.37
Clcn3-204ENSMUST00000110301 Armcx1Q9CX83 456 aa17.37■□□□□ 0.37
Clcn3-204ENSMUST00000110301 Fgd1P52734 960 aa17.37■□□□□ 0.37
Clcn3-204ENSMUST00000110301 Tsen2Q6P7W5 460 aa17.37■□□□□ 0.37
Clcn3-204ENSMUST00000110301 OvosQ3UU35 1456 aa17.36■□□□□ 0.37
Clcn3-204ENSMUST00000110301 Peg3Q3URU2 1571 aa17.35■□□□□ 0.37
Clcn3-204ENSMUST00000110301 U2surpQ6NV83 1029 aaKnown RBP17.35■□□□□ 0.37
Clcn3-204ENSMUST00000110301 AI481877A2ALV5 1481 aa17.34■□□□□ 0.37
Clcn3-204ENSMUST00000110301 4933416C03RikQ3V063 378 aa17.34■□□□□ 0.37
Clcn3-204ENSMUST00000110301 Ssh2Q5SW75 1423 aa17.33■□□□□ 0.37
Clcn3-204ENSMUST00000110301 Iqcf3Q9D498 203 aa17.33■□□□□ 0.36
Clcn3-204ENSMUST00000110301 Rock1P70335 1354 aa17.33■□□□□ 0.36
Clcn3-204ENSMUST00000110301 B4galnt3Q6L8S8 986 aa17.33■□□□□ 0.36
Clcn3-204ENSMUST00000110301 Plekhg5Q66T02 1073 aa17.32■□□□□ 0.36
Clcn3-204ENSMUST00000110301 Gsto1O09131 240 aa17.32■□□□□ 0.36
Clcn3-204ENSMUST00000110301 Atp7aQ64430 1491 aa17.31■□□□□ 0.36
Clcn3-204ENSMUST00000110301 Trim30dE9PWL0 497 aa17.31■□□□□ 0.36
Clcn3-204ENSMUST00000110301 Wdr7Q920I9 1489 aa17.31■□□□□ 0.36
Clcn3-204ENSMUST00000110301 Pbrm1Q8BSQ9 1634 aaKnown RBP17.3■□□□□ 0.36
Clcn3-204ENSMUST00000110301 Znf710Q3U288 666 aa17.3■□□□□ 0.36
Clcn3-204ENSMUST00000110301 Pik3c2gO70167 1506 aa17.3■□□□□ 0.36
Clcn3-204ENSMUST00000110301 Ksr2Q3UVC0 959 aa17.29■□□□□ 0.36
Clcn3-204ENSMUST00000110301 Tmco5bQ80X59 307 aa17.29■□□□□ 0.36
Clcn3-204ENSMUST00000110301 PnisrA2AJT4 805 aaKnown RBP17.29■□□□□ 0.36
Clcn3-204ENSMUST00000110301 GsdmaQ9EST1 446 aa17.29■□□□□ 0.36
Clcn3-204ENSMUST00000110301 Ap3b2Q9JME5 1082 aa17.29■□□□□ 0.36
Clcn3-204ENSMUST00000110301 Cabp4Q8VHC5 271 aa17.29■□□□□ 0.36
Clcn3-204ENSMUST00000110301 Abca16E9PWJ7 1678 aa17.28■□□□□ 0.36
Clcn3-204ENSMUST00000110301 Eif4g3Q80XI3 1579 aaKnown RBP17.27■□□□□ 0.36
Clcn3-204ENSMUST00000110301 NudcO35685 332 aaKnown RBP17.27■□□□□ 0.36
Clcn3-204ENSMUST00000110301 Znf330Q922H9 316 aa17.27■□□□□ 0.36
Clcn3-204ENSMUST00000110301 Arhgef11Q68FM7 1552 aa17.26■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms