RNA–Protein interactions for RNA: ENSMUST00000109444.2

Col4a3bp-202, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 5,285 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-202ENSMUST00000109444 Prkrip1Q9CWV6 186 aaKnown RBP22.22■■□□□ 1.15
Col4a3bp-202ENSMUST00000109444 ScribQ80U72 1612 aa22.21■■□□□ 1.15
Col4a3bp-202ENSMUST00000109444 Kif16bB1AVY7 1312 aa22.2■■□□□ 1.15
Col4a3bp-202ENSMUST00000109444 Q3TQI7 289 aaKnown RBP22.19■■□□□ 1.14
Col4a3bp-202ENSMUST00000109444 Eif4g2Q62448 906 aaKnown RBP22.19■■□□□ 1.14
Col4a3bp-202ENSMUST00000109444 Ush1cQ9ES64 910 aa22.19■■□□□ 1.14
Col4a3bp-202ENSMUST00000109444 Fam184bQ0KK56 942 aa22.18■■□□□ 1.14
Col4a3bp-202ENSMUST00000109444 Polr1aO35134 1717 aaKnown RBP22.17■■□□□ 1.14
Col4a3bp-202ENSMUST00000109444 Iffo2Q8R2V2 512 aa22.17■■□□□ 1.14
Col4a3bp-202ENSMUST00000109444 Top2aQ01320 1528 aaKnown RBP22.17■■□□□ 1.14
Col4a3bp-202ENSMUST00000109444 Ciz1Q8VEH2 845 aa22.17■■□□□ 1.14
Col4a3bp-202ENSMUST00000109444 Stk26Q99JT2 416 aa22.17■■□□□ 1.14
Col4a3bp-202ENSMUST00000109444 Trim58Q5NCC9 485 aa22.16■■□□□ 1.14
Col4a3bp-202ENSMUST00000109444 SlkO54988 1233 aa22.15■■□□□ 1.14
Col4a3bp-202ENSMUST00000109444 Rassf8Q8CJ96 419 aa22.15■■□□□ 1.14
Col4a3bp-202ENSMUST00000109444 Atl3Q91YH5 541 aa22.15■■□□□ 1.14
Col4a3bp-202ENSMUST00000109444 Znf330Q922H9 316 aa22.15■■□□□ 1.14
Col4a3bp-202ENSMUST00000109444 GorabQ8BRM2 368 aa22.15■■□□□ 1.14
Col4a3bp-202ENSMUST00000109444 Tsen2Q6P7W5 460 aa22.14■■□□□ 1.13
Col4a3bp-202ENSMUST00000109444 Shroom4Q1W617 1475 aa22.14■■□□□ 1.13
Col4a3bp-202ENSMUST00000109444 Inpp5dQ9ES52 1191 aa22.14■■□□□ 1.13
Col4a3bp-202ENSMUST00000109444 Sart1Q9Z315 806 aaKnown RBP22.14■■□□□ 1.13
Col4a3bp-202ENSMUST00000109444 Zscan10Q3URR7 782 aa22.13■■□□□ 1.13
Col4a3bp-202ENSMUST00000109444 Kif3bQ61771 747 aa22.13■■□□□ 1.13
Col4a3bp-202ENSMUST00000109444 MecomP14404 1042 aa22.13■■□□□ 1.13
Col4a3bp-202ENSMUST00000109444 Ncoa2Q61026 1462 aa22.13■■□□□ 1.13
Col4a3bp-202ENSMUST00000109444 GsdmaQ9EST1 446 aa22.12■■□□□ 1.13
Col4a3bp-202ENSMUST00000109444 Birc3O08863 600 aa22.12■■□□□ 1.13
Col4a3bp-202ENSMUST00000109444 Ncapd3Q6ZQK0 1506 aa22.12■■□□□ 1.13
Col4a3bp-202ENSMUST00000109444 Rabep1O35551 862 aa22.11■■□□□ 1.13
Col4a3bp-202ENSMUST00000109444 Casq1O09165 405 aa22.1■■□□□ 1.13
Col4a3bp-202ENSMUST00000109444 CgnP59242 1191 aa22.1■■□□□ 1.13
Col4a3bp-202ENSMUST00000109444 St18Q80TY4 1045 aa22.1■■□□□ 1.13
Col4a3bp-202ENSMUST00000109444 Tpm3-rs7D3Z2H9 248 aa22.09■■□□□ 1.13
Col4a3bp-202ENSMUST00000109444 Kiaa0754Q69ZZ9 979 aa22.08■■□□□ 1.13
Col4a3bp-202ENSMUST00000109444 Ak7Q9D2H2 614 aa22.08■■□□□ 1.12
Col4a3bp-202ENSMUST00000109444 Kif7B7ZNG0 1348 aa22.08■■□□□ 1.12
Col4a3bp-202ENSMUST00000109444 Fan1Q69ZT1 1020 aa22.07■■□□□ 1.12
Col4a3bp-202ENSMUST00000109444 Trim30aP15533 496 aa22.07■■□□□ 1.12
Col4a3bp-202ENSMUST00000109444 Efcab5A0JP43 1406 aa22.07■■□□□ 1.12
Col4a3bp-202ENSMUST00000109444 PnisrA2AJT4 805 aaKnown RBP22.06■■□□□ 1.12
Col4a3bp-202ENSMUST00000109444 WrnO09053 1401 aa22.06■■□□□ 1.12
Col4a3bp-202ENSMUST00000109444 Anapc15P60007 132 aa22.06■■□□□ 1.12
Col4a3bp-202ENSMUST00000109444 Plekhh1Q80TI1 1356 aa22.05■■□□□ 1.12
Col4a3bp-202ENSMUST00000109444 G3bp1P97855 465 aaKnown RBP22.04■■□□□ 1.12
Col4a3bp-202ENSMUST00000109444 Ccdc60Q8C4J0 545 aa22.04■■□□□ 1.12
Col4a3bp-202ENSMUST00000109444 Map3k1P53349 1493 aa22.04■■□□□ 1.12
Col4a3bp-202ENSMUST00000109444 Rtn4Q99P72 1162 aaKnown RBP22.03■■□□□ 1.12
Col4a3bp-202ENSMUST00000109444 Filip1lQ6P6L0 1131 aa22.03■■□□□ 1.12
Col4a3bp-202ENSMUST00000109444 Naip1Q9QWK5 1403 aa22.02■■□□□ 1.12
Col4a3bp-202ENSMUST00000109444 Cc2d2bA0A286YDU8 1405 aa22.02■■□□□ 1.12
Col4a3bp-202ENSMUST00000109444 Iqgap2Q3UQ44 1575 aa22.02■■□□□ 1.12
Col4a3bp-202ENSMUST00000109444 Dhx29Q6PGC1 1365 aaKnown RBP22.02■■□□□ 1.12
Col4a3bp-202ENSMUST00000109444 Nsd2Q8BVE8 1365 aa22.02■■□□□ 1.12
Col4a3bp-202ENSMUST00000109444 Gprasp1Q5U4C1 1347 aa22.02■■□□□ 1.12
Col4a3bp-202ENSMUST00000109444 Rab11fip3Q8CHD8 1047 aa22.01■■□□□ 1.11
Col4a3bp-202ENSMUST00000109444 Map7d2A2AG50 781 aa22.01■■□□□ 1.11
Col4a3bp-202ENSMUST00000109444 Washc2Q6PGL7 1334 aa22.01■■□□□ 1.11
Col4a3bp-202ENSMUST00000109444 Esx1O88933 382 aa22■■□□□ 1.11
Col4a3bp-202ENSMUST00000109444 Stk31Q99MW1 1018 aa22■■□□□ 1.11
Col4a3bp-202ENSMUST00000109444 Ccdc146E9Q9F7 977 aa22■■□□□ 1.11
Col4a3bp-202ENSMUST00000109444 NrkQ9R0G8 1455 aa22■■□□□ 1.11
Col4a3bp-202ENSMUST00000109444 Usp40Q8BWR4 1235 aa22■■□□□ 1.11
Col4a3bp-202ENSMUST00000109444 Psme1P97371 249 aa22■■□□□ 1.11
Col4a3bp-202ENSMUST00000109444 Nol10Q5RJG1 687 aaKnown RBP21.99■■□□□ 1.11
Col4a3bp-202ENSMUST00000109444 Cetn4Q8K4K1 168 aa21.99■■□□□ 1.11
Col4a3bp-202ENSMUST00000109444 Sf3a1Q8K4Z5 791 aaKnown RBP21.99■■□□□ 1.11
Col4a3bp-202ENSMUST00000109444 Eif2s2Q99L45 331 aaKnown RBP21.98■■□□□ 1.11
Col4a3bp-202ENSMUST00000109444 Znf316Q6PGE4 1016 aa21.98■■□□□ 1.11
Col4a3bp-202ENSMUST00000109444 Ccdc30Q8BVF4 654 aa21.97■■□□□ 1.11
Col4a3bp-202ENSMUST00000109444 Ift140E9PY46 1464 aa21.97■■□□□ 1.11
Col4a3bp-202ENSMUST00000109444 Dnai2A2AC93 623 aa21.97■■□□□ 1.11
Col4a3bp-202ENSMUST00000109444 Arid3cA6PWV5 409 aa21.97■■□□□ 1.11
Col4a3bp-202ENSMUST00000109444 Plin1Q8CGN5 517 aa21.97■■□□□ 1.11
Col4a3bp-202ENSMUST00000109444 Pdcl3Q8BVF2 240 aa21.97■■□□□ 1.11
Col4a3bp-202ENSMUST00000109444 Rpgrip1lQ8CG73 1264 aa21.97■■□□□ 1.11
Col4a3bp-202ENSMUST00000109444 Cc2d2aQ8CFW7 1633 aa21.96■■□□□ 1.11
Col4a3bp-202ENSMUST00000109444 KinQ8K339 391 aa21.96■■□□□ 1.11
Col4a3bp-202ENSMUST00000109444 Arhgef5E9Q7D5 1581 aa21.95■■□□□ 1.1
Col4a3bp-202ENSMUST00000109444 Brpf1B2RRD7 1212 aa21.94■■□□□ 1.1
Col4a3bp-202ENSMUST00000109444 Ccdc183A2AJB1 534 aa21.93■■□□□ 1.1
Col4a3bp-202ENSMUST00000109444 Plekhg5Q66T02 1073 aa21.93■■□□□ 1.1
Col4a3bp-202ENSMUST00000109444 Nap1l3Q794H2 544 aa21.93■■□□□ 1.1
Col4a3bp-202ENSMUST00000109444 Ttll13A4Q9F6 804 aa21.93■■□□□ 1.1
Col4a3bp-202ENSMUST00000109444 Kif4P33174 1231 aa21.91■■□□□ 1.1
Col4a3bp-202ENSMUST00000109444 Utp14aQ640M1 767 aaKnown RBP21.9■■□□□ 1.1
Col4a3bp-202ENSMUST00000109444 SetQ9EQU5 289 aaKnown RBP21.9■■□□□ 1.1
Col4a3bp-202ENSMUST00000109444 Ccdc173A0JLY1 547 aa21.9■■□□□ 1.1
Col4a3bp-202ENSMUST00000109444 Slc4a2P13808 1237 aaKnown RBP21.9■■□□□ 1.1
Col4a3bp-202ENSMUST00000109444 ErbinQ80TH2 1402 aa21.9■■□□□ 1.1
Col4a3bp-202ENSMUST00000109444 Isy1Q69ZQ2 285 aaKnown RBP21.9■■□□□ 1.1
Col4a3bp-202ENSMUST00000109444 Gripap1Q8VD04 806 aa21.9■■□□□ 1.1
Col4a3bp-202ENSMUST00000109444 Txndc2Q6P902 515 aa21.89■■□□□ 1.09
Col4a3bp-202ENSMUST00000109444 Ccer1Q9CQL2 403 aa21.89■■□□□ 1.09
Col4a3bp-202ENSMUST00000109444 Tdrd9Q14BI7 1383 aa21.88■■□□□ 1.09
Col4a3bp-202ENSMUST00000109444 Prdm16A2A935 1275 aa21.88■■□□□ 1.09
Col4a3bp-202ENSMUST00000109444 Arap1Q4LDD4 1452 aa21.88■■□□□ 1.09
Col4a3bp-202ENSMUST00000109444 Ppp1r18Q8BQ30 594 aa21.87■■□□□ 1.09
Col4a3bp-202ENSMUST00000109444 Tnnt1O88346 262 aa21.87■■□□□ 1.09
Col4a3bp-202ENSMUST00000109444 Clstn1Q9EPL2 979 aa21.87■■□□□ 1.09
Retrieved 100 of 22,080 RNA–protein pairs in 9.8 ms