RNA–Protein interactions for RNA: ENSMUST00000109113.7

Clk4-203, Transcript of Dual specificity protein kinase CLK4, mousemouse

TSL 1 (best) BASIC

Gene Clk4, Length 1,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4-203ENSMUST00000109113 Top2bQ64511 1612 aa9.16□□□□□ -0.94
Clk4-203ENSMUST00000109113 Slc4a9E9PUP3 929 aa9.16□□□□□ -0.94
Clk4-203ENSMUST00000109113 Fam193bQ3U2K0 892 aa9.16□□□□□ -0.94
Clk4-203ENSMUST00000109113 Dnajc5gQ8C632 165 aa9.16□□□□□ -0.94
Clk4-203ENSMUST00000109113 Hmx2P43687 273 aa9.14□□□□□ -0.95
Clk4-203ENSMUST00000109113 Eya1P97767 591 aa9.14□□□□□ -0.95
Clk4-203ENSMUST00000109113 Masp1P98064 704 aa9.14□□□□□ -0.95
Clk4-203ENSMUST00000109113 UncxO08934 530 aa9.13□□□□□ -0.95
Clk4-203ENSMUST00000109113 Scube2Q9JJS0 997 aa9.13□□□□□ -0.95
Clk4-203ENSMUST00000109113 Zcchc11B2RX14 1644 aaKnown RBP9.12□□□□□ -0.95
Clk4-203ENSMUST00000109113 Sgip1Q8VD37 806 aa9.12□□□□□ -0.95
Clk4-203ENSMUST00000109113 Cttnbp2B9EJA2 1648 aa9.11□□□□□ -0.95
Clk4-203ENSMUST00000109113 Ttll13A4Q9F6 804 aa9.1□□□□□ -0.95
Clk4-203ENSMUST00000109113 Nudt12Q9DCN1 462 aa9.1□□□□□ -0.95
Clk4-203ENSMUST00000109113 LipiF6YQT7 476 aa9.09□□□□□ -0.95
Clk4-203ENSMUST00000109113 ZyxQ62523 564 aa9.09□□□□□ -0.95
Clk4-203ENSMUST00000109113 Farp1F8VPU2 1048 aa9.07□□□□□ -0.96
Clk4-203ENSMUST00000109113 Cux2P70298 1426 aa9.07□□□□□ -0.96
Clk4-203ENSMUST00000109113 1700006A11RikB9EHI3 544 aa9.06□□□□□ -0.96
Clk4-203ENSMUST00000109113 Adamts8P57110 905 aa9.06□□□□□ -0.96
Clk4-203ENSMUST00000109113 Ffar3Q3UFD7 319 aa9.05□□□□□ -0.96
Clk4-203ENSMUST00000109113 NntQ61941 1086 aaKnown RBP9.05□□□□□ -0.96
Clk4-203ENSMUST00000109113 Prrt3Q6PE13 971 aa9.05□□□□□ -0.96
Clk4-203ENSMUST00000109113 Rhox8Q6VSS7 320 aa9.05□□□□□ -0.96
Clk4-203ENSMUST00000109113 Wbp1lQ8BGW2 348 aa9.05□□□□□ -0.96
Clk4-203ENSMUST00000109113 Pabpn1Q8CCS6 302 aaKnown RBP9.05□□□□□ -0.96
Clk4-203ENSMUST00000109113 CftrP26361 1476 aa9.05□□□□□ -0.96
Clk4-203ENSMUST00000109113 Fam160a1Q505K2 1081 aa9.05□□□□□ -0.96
Clk4-203ENSMUST00000109113 Tmc3Q7TQ69 1130 aa9.05□□□□□ -0.96
Clk4-203ENSMUST00000109113 Speer2E9Q9U2 264 aa9.04□□□□□ -0.96
Clk4-203ENSMUST00000109113 Lrfn2Q80TG9 788 aa9.04□□□□□ -0.96
Clk4-203ENSMUST00000109113 Ints3Q7TPD0 1041 aaKnown RBP9.03□□□□□ -0.96
Clk4-203ENSMUST00000109113 Arhgef5E9Q7D5 1581 aa9.03□□□□□ -0.96
Clk4-203ENSMUST00000109113 Cysrt1Q9D1E4 142 aa9.02□□□□□ -0.97
Clk4-203ENSMUST00000109113 Supt5hO55201 1082 aaKnown RBP9.01□□□□□ -0.97
Clk4-203ENSMUST00000109113 IncenpQ9WU62 880 aa9□□□□□ -0.97
Clk4-203ENSMUST00000109113 Synj1Q8CHC4 1574 aa8.99□□□□□ -0.97
Clk4-203ENSMUST00000109113 Gm38119A0A0A6YX29 146 aa8.99□□□□□ -0.97
Clk4-203ENSMUST00000109113 Pdia6Q922R8 440 aaKnown RBP8.99□□□□□ -0.97
Clk4-203ENSMUST00000109113 Plekhg3Q4VAC9 1341 aa8.98□□□□□ -0.97
Clk4-203ENSMUST00000109113 Slc24a1Q91WD8 1130 aa8.98□□□□□ -0.97
Clk4-203ENSMUST00000109113 Urb2E9Q7L1 1524 aaKnown RBP8.97□□□□□ -0.97
Clk4-203ENSMUST00000109113 Kif15Q6P9L6 1387 aa8.96□□□□□ -0.97
Clk4-203ENSMUST00000109113 Jph1Q9ET80 660 aa8.96□□□□□ -0.98
Clk4-203ENSMUST00000109113 Plb1Q3TTY0 1478 aa8.96□□□□□ -0.98
Clk4-203ENSMUST00000109113 Rusc2Q80U22 1514 aa8.95□□□□□ -0.98
Clk4-203ENSMUST00000109113 Gm3233E9Q2H5 230 aa8.94□□□□□ -0.98
Clk4-203ENSMUST00000109113 Klra1P20937 262 aa8.94□□□□□ -0.98
Clk4-203ENSMUST00000109113 Lamc3Q9R0B6 1581 aa8.92□□□□□ -0.98
Clk4-203ENSMUST00000109113 Slc27a5Q4LDG0 689 aa8.92□□□□□ -0.98
Clk4-203ENSMUST00000109113 OscarQ8VBT3 265 aa8.91□□□□□ -0.98
Clk4-203ENSMUST00000109113 Tmub1Q9JMG3 245 aa8.91□□□□□ -0.98
Clk4-203ENSMUST00000109113 Brd4Q9ESU6 1400 aaKnown RBP8.9□□□□□ -0.98
Clk4-203ENSMUST00000109113 Gm13695A2AK44 830 aa8.9□□□□□ -0.99
Clk4-203ENSMUST00000109113 Gpr150Q8BL07 427 aa8.9□□□□□ -0.99
Clk4-203ENSMUST00000109113 Unc5aQ8K1S4 898 aa8.9□□□□□ -0.99
Clk4-203ENSMUST00000109113 Cep164Q5DU05 1446 aa8.89□□□□□ -0.99
Clk4-203ENSMUST00000109113 Adgrl3Q80TS3 1537 aa8.88□□□□□ -0.99
Clk4-203ENSMUST00000109113 Npm1Q61937 292 aaKnown RBP8.87□□□□□ -0.99
Clk4-203ENSMUST00000109113 Rtl1Q7M732 1744 aa8.87□□□□□ -0.99
Clk4-203ENSMUST00000109113 Rpgrip1Q9EPQ2 1331 aa8.87□□□□□ -0.99
Clk4-203ENSMUST00000109113 Crocc2F6XLV1 1638 aa8.86□□□□□ -0.99
Clk4-203ENSMUST00000109113 Clcn1Q64347 994 aa8.86□□□□□ -0.99
Clk4-203ENSMUST00000109113 Dhx29Q6PGC1 1365 aaKnown RBP8.85□□□□□ -0.99
Clk4-203ENSMUST00000109113 Ift140E9PY46 1464 aa8.85□□□□□ -0.99
Clk4-203ENSMUST00000109113 Sp7Q8VI67 428 aa8.85□□□□□ -0.99
Clk4-203ENSMUST00000109113 ZfrO88532 1074 aaKnown RBP8.84□□□□□ -0.99
Clk4-203ENSMUST00000109113 PtprtQ99M80 1454 aa8.82□□□□□ -1
Clk4-203ENSMUST00000109113 Cep170Q6A065 1588 aa8.82□□□□□ -1
Clk4-203ENSMUST00000109113 Map2k7Q8CE90 535 aa8.81□□□□□ -1
Clk4-203ENSMUST00000109113 Pcdhgb4Q91XX6 912 aa8.81□□□□□ -1
Clk4-203ENSMUST00000109113 Noa1Q9JJG9 693 aaKnown RBP8.81□□□□□ -1
Clk4-203ENSMUST00000109113 Ttbk1Q6PCN3 1308 aa8.8□□□□□ -1
Clk4-203ENSMUST00000109113 ColqO35348 457 aa8.8□□□□□ -1
Clk4-203ENSMUST00000109113 Ppp4cP97470 307 aa8.8□□□□□ -1
Clk4-203ENSMUST00000109113 PtprkP35822 1457 aa8.78□□□□□ -1
Clk4-203ENSMUST00000109113 Tsr1Q5SWD9 803 aa8.78□□□□□ -1
Clk4-203ENSMUST00000109113 Scaf8Q6DID3 1268 aa8.77□□□□□ -1.01
Clk4-203ENSMUST00000109113 Thsd4Q3UTY6 1018 aa8.76□□□□□ -1.01
Clk4-203ENSMUST00000109113 Ddx11Q6AXC6 880 aa8.76□□□□□ -1.01
Clk4-203ENSMUST00000109113 Gpc1Q9QZF2 557 aa8.76□□□□□ -1.01
Clk4-203ENSMUST00000109113 Ccdc18Q640L5 1455 aa8.76□□□□□ -1.01
Clk4-203ENSMUST00000109113 LrpprcQ6PB66 1392 aaKnown RBP8.76□□□□□ -1.01
Clk4-203ENSMUST00000109113 Prpmp5E9PXN1 296 aa8.76□□□□□ -1.01
Clk4-203ENSMUST00000109113 Foxd4Q60688 444 aa8.76□□□□□ -1.01
Clk4-203ENSMUST00000109113 Rccd1Q8BTU7 377 aa8.76□□□□□ -1.01
Clk4-203ENSMUST00000109113 Gapvd1Q6PAR5 1458 aa8.75□□□□□ -1.01
Clk4-203ENSMUST00000109113 Map4k4P97820 1233 aaKnown RBP8.75□□□□□ -1.01
Clk4-203ENSMUST00000109113 Col9a1Q05722 921 aa8.75□□□□□ -1.01
Clk4-203ENSMUST00000109113 Pprc1Q6NZN1 1644 aa8.75□□□□□ -1.01
Clk4-203ENSMUST00000109113 Kcnn2P58390 839 aa8.74□□□□□ -1.01
Clk4-203ENSMUST00000109113 Pbrm1Q8BSQ9 1634 aaKnown RBP8.74□□□□□ -1.01
Clk4-203ENSMUST00000109113 Gm20503G3UZK1 150 aa8.73□□□□□ -1.01
Clk4-203ENSMUST00000109113 Esf1Q3V1V3 845 aaKnown RBP8.73□□□□□ -1.01
Clk4-203ENSMUST00000109113 Spryd7Q3TFQ1 196 aa8.72□□□□□ -1.01
Clk4-203ENSMUST00000109113 Trim32Q8CH72 655 aa8.72□□□□□ -1.01
Clk4-203ENSMUST00000109113 Tmem52Q9D702 196 aa8.72□□□□□ -1.01
Clk4-203ENSMUST00000109113 Camsap1A2AHC3 1581 aa8.72□□□□□ -1.01
Clk4-203ENSMUST00000109113 TnnQ80Z71 1560 aa8.72□□□□□ -1.01
Clk4-203ENSMUST00000109113 LtbrP50284 415 aa8.72□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 19.3 ms