RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Nop58Q6DFW4 536 aaKnown RBP20.87■□□□□ 0.93
Nup88-202ENSMUST00000108530 Adgrl3Q80TS3 1537 aa20.87■□□□□ 0.93
Nup88-202ENSMUST00000108530 Grwd1Q810D6 446 aaKnown RBP20.86■□□□□ 0.93
Nup88-202ENSMUST00000108530 Usp54Q8BL06 1588 aaKnown RBP20.85■□□□□ 0.93
Nup88-202ENSMUST00000108530 Kif3bQ61771 747 aa20.85■□□□□ 0.93
Nup88-202ENSMUST00000108530 Atp7aQ64430 1491 aa20.85■□□□□ 0.93
Nup88-202ENSMUST00000108530 Xrn1P97789 1719 aaKnown RBP20.84■□□□□ 0.93
Nup88-202ENSMUST00000108530 Dot1lQ6XZL8 1540 aa20.83■□□□□ 0.92
Nup88-202ENSMUST00000108530 Pprc1Q6NZN1 1644 aa20.82■□□□□ 0.92
Nup88-202ENSMUST00000108530 ShprhQ7TPQ3 1674 aa20.8■□□□□ 0.92
Nup88-202ENSMUST00000108530 Nos1Q9Z0J4 1429 aa20.79■□□□□ 0.92
Nup88-202ENSMUST00000108530 Abca17E9PX95 1733 aa20.78■□□□□ 0.92
Nup88-202ENSMUST00000108530 Kif1bQ60575 1816 aaKnown RBP20.77■□□□□ 0.92
Nup88-202ENSMUST00000108530 Washc2Q6PGL7 1334 aa20.77■□□□□ 0.92
Nup88-202ENSMUST00000108530 Erich6D3Z6S9 713 aa20.77■□□□□ 0.91
Nup88-202ENSMUST00000108530 Depdc5P61460 1591 aa20.76■□□□□ 0.91
Nup88-202ENSMUST00000108530 Mug2P28666 1451 aa20.76■□□□□ 0.91
Nup88-202ENSMUST00000108530 OvosQ3UU35 1456 aa20.76■□□□□ 0.91
Nup88-202ENSMUST00000108530 Tarbp1E9Q368 1579 aa20.76■□□□□ 0.91
Nup88-202ENSMUST00000108530 DroshaQ5HZJ0 1373 aaKnown RBP20.76■□□□□ 0.91
Nup88-202ENSMUST00000108530 Robo2Q7TPD3 1470 aa20.76■□□□□ 0.91
Nup88-202ENSMUST00000108530 Myom3A2ABU4 1439 aa20.76■□□□□ 0.91
Nup88-202ENSMUST00000108530 Dapk1Q80YE7 1442 aa20.76■□□□□ 0.91
Nup88-202ENSMUST00000108530 Mbd5B1AYB6 1498 aa20.75■□□□□ 0.91
Nup88-202ENSMUST00000108530 Ptch1Q61115 1434 aa20.75■□□□□ 0.91
Nup88-202ENSMUST00000108530 Rundc1Q0VDN7 615 aa20.74■□□□□ 0.91
Nup88-202ENSMUST00000108530 Ppp1r18Q8BQ30 594 aa20.74■□□□□ 0.91
Nup88-202ENSMUST00000108530 Cdk13Q69ZA1 1511 aaKnown RBP20.73■□□□□ 0.91
Nup88-202ENSMUST00000108530 Rock1P70335 1354 aa20.7■□□□□ 0.9
Nup88-202ENSMUST00000108530 Znf518aB2RRF6 1478 aaKnown RBP20.69■□□□□ 0.9
Nup88-202ENSMUST00000108530 Card11Q8CIS0 1159 aa20.68■□□□□ 0.9
Nup88-202ENSMUST00000108530 Nsd2Q8BVE8 1365 aa20.68■□□□□ 0.9
Nup88-202ENSMUST00000108530 Edc4Q3UJB9 1406 aaKnown RBP20.68■□□□□ 0.9
Nup88-202ENSMUST00000108530 Col17a1Q07563 1470 aa20.68■□□□□ 0.9
Nup88-202ENSMUST00000108530 Myo5cE9Q1F5 1742 aa20.68■□□□□ 0.9
Nup88-202ENSMUST00000108530 Ncoa1P70365 1447 aa20.67■□□□□ 0.9
Nup88-202ENSMUST00000108530 Kdm5cP41230 1554 aa20.67■□□□□ 0.9
Nup88-202ENSMUST00000108530 Sall3Q62255 1320 aa20.66■□□□□ 0.9
Nup88-202ENSMUST00000108530 Ttbk1Q6PCN3 1308 aa20.66■□□□□ 0.9
Nup88-202ENSMUST00000108530 Ifit1bl1D3Z6F0 470 aa20.65■□□□□ 0.9
Nup88-202ENSMUST00000108530 Mroh3A0A1D5RM54 893 aa20.64■□□□□ 0.89
Nup88-202ENSMUST00000108530 Zbtb4Q5F293 982 aa20.64■□□□□ 0.89
Nup88-202ENSMUST00000108530 Ylpm1Q9R0I7 1386 aaKnown RBP20.63■□□□□ 0.89
Nup88-202ENSMUST00000108530 Clasp1Q80TV8 1535 aaKnown RBP20.63■□□□□ 0.89
Nup88-202ENSMUST00000108530 Atp10aO54827 1508 aa20.62■□□□□ 0.89
Nup88-202ENSMUST00000108530 Abca6Q8K441 1624 aa20.62■□□□□ 0.89
Nup88-202ENSMUST00000108530 Iqgap1Q9JKF1 1657 aaKnown RBP20.62■□□□□ 0.89
Nup88-202ENSMUST00000108530 AglF8VPN4 1532 aa20.62■□□□□ 0.89
Nup88-202ENSMUST00000108530 Polr3aB2RXC6 1390 aa20.62■□□□□ 0.89
Nup88-202ENSMUST00000108530 Ttc21bQ0HA38 1315 aa20.62■□□□□ 0.89
Nup88-202ENSMUST00000108530 Cpsf1Q9EPU4 1441 aaKnown RBP20.61■□□□□ 0.89
Nup88-202ENSMUST00000108530 Gli2Q0VGT2 1544 aa20.61■□□□□ 0.89
Nup88-202ENSMUST00000108530 Fndc1E9Q043 1732 aa20.61■□□□□ 0.89
Nup88-202ENSMUST00000108530 Dip2cE9PWR4 1557 aa20.6■□□□□ 0.89
Nup88-202ENSMUST00000108530 Ppip5k1A2ARP1 1436 aa20.6■□□□□ 0.89
Nup88-202ENSMUST00000108530 Anks4bQ8K3X6 423 aa20.59■□□□□ 0.89
Nup88-202ENSMUST00000108530 Naip6Q9JIB6 1403 aa20.59■□□□□ 0.89
Nup88-202ENSMUST00000108530 Csrnp3P59055 597 aa20.58■□□□□ 0.89
Nup88-202ENSMUST00000108530 Stk24Q99KH8 431 aa20.58■□□□□ 0.89
Nup88-202ENSMUST00000108530 Yeats2Q3TUF7 1407 aa20.58■□□□□ 0.88
Nup88-202ENSMUST00000108530 RalgapbQ8BQZ4 1484 aa20.58■□□□□ 0.88
Nup88-202ENSMUST00000108530 Adamts13Q769J6 1426 aa20.57■□□□□ 0.88
Nup88-202ENSMUST00000108530 Slc24a1Q91WD8 1130 aa20.57■□□□□ 0.88
Nup88-202ENSMUST00000108530 RereQ80TZ9 1558 aa20.56■□□□□ 0.88
Nup88-202ENSMUST00000108530 Cwc22Q8C5N3 908 aaKnown RBP20.56■□□□□ 0.88
Nup88-202ENSMUST00000108530 AnkarA2RT91 1465 aa20.55■□□□□ 0.88
Nup88-202ENSMUST00000108530 Topbp1Q6ZQF0 1515 aa20.55■□□□□ 0.88
Nup88-202ENSMUST00000108530 Prex1Q69ZK0 1650 aa20.55■□□□□ 0.88
Nup88-202ENSMUST00000108530 Ttc37F8VPK0 1563 aa20.54■□□□□ 0.88
Nup88-202ENSMUST00000108530 Smg6P61406 1418 aaKnown RBP20.53■□□□□ 0.88
Nup88-202ENSMUST00000108530 Kdm2aP59997 1161 aa20.53■□□□□ 0.88
Nup88-202ENSMUST00000108530 Tmem131lQ3U3D7 1597 aa20.52■□□□□ 0.88
Nup88-202ENSMUST00000108530 Cdc42bpgQ80UW5 1551 aa20.52■□□□□ 0.88
Nup88-202ENSMUST00000108530 Plch2A2AP18 1501 aa20.52■□□□□ 0.87
Nup88-202ENSMUST00000108530 Cul9Q80TT8 1865 aa20.52■□□□□ 0.87
Nup88-202ENSMUST00000108530 Tulp4Q9JIL5 1547 aa20.51■□□□□ 0.87
Nup88-202ENSMUST00000108530 Abcc6Q9R1S7 1498 aa20.51■□□□□ 0.87
Nup88-202ENSMUST00000108530 1700123L14RikQ3V2K7 440 aa20.5■□□□□ 0.87
Nup88-202ENSMUST00000108530 AdgbG3UZ78 1657 aa20.5■□□□□ 0.87
Nup88-202ENSMUST00000108530 Hdac5Q9Z2V6 1113 aa20.5■□□□□ 0.87
Nup88-202ENSMUST00000108530 Kiaa0556Q8C753 1610 aa20.5■□□□□ 0.87
Nup88-202ENSMUST00000108530 ErbinQ80TH2 1402 aa20.49■□□□□ 0.87
Nup88-202ENSMUST00000108530 Cfap65Q3V0B4 1847 aa20.48■□□□□ 0.87
Nup88-202ENSMUST00000108530 Iqgap3F8VQ29 1632 aa20.47■□□□□ 0.87
Nup88-202ENSMUST00000108530 Uggt2E9Q4X2 1504 aa20.44■□□□□ 0.86
Nup88-202ENSMUST00000108530 Plekhg5Q66T02 1073 aa20.44■□□□□ 0.86
Nup88-202ENSMUST00000108530 Os9Q8K2C7 672 aa20.43■□□□□ 0.86
Nup88-202ENSMUST00000108530 Synj2Q9D2G5 1434 aa20.43■□□□□ 0.86
Nup88-202ENSMUST00000108530 AatkQ80YE4 1365 aa20.41■□□□□ 0.86
Nup88-202ENSMUST00000108530 Wwc2Q6NXJ0 1187 aa20.4■□□□□ 0.86
Nup88-202ENSMUST00000108530 Hecw2Q6I6G8 1578 aa20.4■□□□□ 0.86
Nup88-202ENSMUST00000108530 Rock2P70336 1388 aa20.39■□□□□ 0.86
Nup88-202ENSMUST00000108530 Abca8aQ8K442 1620 aa20.38■□□□□ 0.85
Nup88-202ENSMUST00000108530 Gm20521D3Z5F7 333 aa20.37■□□□□ 0.85
Nup88-202ENSMUST00000108530 Fan1Q69ZT1 1020 aa20.36■□□□□ 0.85
Nup88-202ENSMUST00000108530 Afap1Q80YS6 731 aa20.36■□□□□ 0.85
Nup88-202ENSMUST00000108530 Exoc6Q8R313 802 aa20.35■□□□□ 0.85
Nup88-202ENSMUST00000108530 Adgrb3Q80ZF8 1522 aa20.35■□□□□ 0.85
Nup88-202ENSMUST00000108530 Gm13695A2AK44 830 aa20.34■□□□□ 0.85
Nup88-202ENSMUST00000108530 Mrs2Q5NCE8 434 aa20.34■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 59.2 ms