RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Senp3Q9EP97 568 aaKnown RBP12.87□□□□□ -0.35
Scn9a-201ENSMUST00000100063 Evc2Q8K1G2 1220 aa12.87□□□□□ -0.35
Scn9a-201ENSMUST00000100063 Map7d2A2AG50 781 aa12.87□□□□□ -0.35
Scn9a-201ENSMUST00000100063 Egfem1Q8C088 590 aa12.87□□□□□ -0.35
Scn9a-201ENSMUST00000100063 RdxP26043 583 aaKnown RBP12.87□□□□□ -0.35
Scn9a-201ENSMUST00000100063 Atp6v1dP57746 247 aa12.86□□□□□ -0.35
Scn9a-201ENSMUST00000100063 Tpm1P58771 284 aa12.86□□□□□ -0.35
Scn9a-201ENSMUST00000100063 Ccp110Q7TSH4 1004 aa12.86□□□□□ -0.35
Scn9a-201ENSMUST00000100063 Srcin1Q9QWI6 1250 aa12.86□□□□□ -0.35
Scn9a-201ENSMUST00000100063 Ftsj3Q9DBE9 838 aaKnown RBP12.86□□□□□ -0.35
Scn9a-201ENSMUST00000100063 WrnO09053 1401 aa12.85□□□□□ -0.35
Scn9a-201ENSMUST00000100063 Cplx2P84086 134 aa12.84□□□□□ -0.35
Scn9a-201ENSMUST00000100063 Gm21190A0A0G2JGJ6 266 aa12.84□□□□□ -0.35
Scn9a-201ENSMUST00000100063 Ppp4r3bQ922R5 820 aa12.84□□□□□ -0.35
Scn9a-201ENSMUST00000100063 Aebp1Q640N1 1128 aa12.84□□□□□ -0.35
Scn9a-201ENSMUST00000100063 Hs1bp3Q3TC93 395 aa12.83□□□□□ -0.36
Scn9a-201ENSMUST00000100063 Fan1Q69ZT1 1020 aa12.82□□□□□ -0.36
Scn9a-201ENSMUST00000100063 Arhgap35Q91YM2 1499 aa12.82□□□□□ -0.36
Scn9a-201ENSMUST00000100063 A0A1L1SQF0 893 aa12.82□□□□□ -0.36
Scn9a-201ENSMUST00000100063 MsnP26041 577 aaKnown RBP12.81□□□□□ -0.36
Scn9a-201ENSMUST00000100063 Chmp5Q9D7S9 219 aa12.81□□□□□ -0.36
Scn9a-201ENSMUST00000100063 Ksr2Q3UVC0 959 aa12.81□□□□□ -0.36
Scn9a-201ENSMUST00000100063 Zpr1Q62384 459 aa12.81□□□□□ -0.36
Scn9a-201ENSMUST00000100063 CrcpO35427 148 aa12.81□□□□□ -0.36
Scn9a-201ENSMUST00000100063 Cluap1Q8R3P7 413 aa12.81□□□□□ -0.36
Scn9a-201ENSMUST00000100063 Ccdc27Q3V036 639 aa12.81□□□□□ -0.36
Scn9a-201ENSMUST00000100063 Zscan21Q07231 555 aa12.8□□□□□ -0.36
Scn9a-201ENSMUST00000100063 Ipo7Q9EPL8 1038 aaKnown RBP12.8□□□□□ -0.36
Scn9a-201ENSMUST00000100063 Gnl3lQ6PGG6 577 aaKnown RBP12.8□□□□□ -0.36
Scn9a-201ENSMUST00000100063 Srek1Q8BZX4 494 aaKnown RBP12.8□□□□□ -0.36
Scn9a-201ENSMUST00000100063 Rbm5Q91YE7 815 aaKnown RBP12.8□□□□□ -0.36
Scn9a-201ENSMUST00000100063 Cux2P70298 1426 aa12.79□□□□□ -0.36
Scn9a-201ENSMUST00000100063 GorabQ8BRM2 368 aa12.79□□□□□ -0.36
Scn9a-201ENSMUST00000100063 Kdm5dQ62240 1548 aa12.79□□□□□ -0.36
Scn9a-201ENSMUST00000100063 NexnQ7TPW1 607 aa12.79□□□□□ -0.36
Scn9a-201ENSMUST00000100063 Shroom4Q1W617 1475 aa12.79□□□□□ -0.36
Scn9a-201ENSMUST00000100063 Tceal9Q9DD24 104 aa12.79□□□□□ -0.36
Scn9a-201ENSMUST00000100063 Cgnl1Q6AW69 1298 aa12.79□□□□□ -0.36
Scn9a-201ENSMUST00000100063 Hspa5P20029 655 aaKnown RBP12.78□□□□□ -0.36
Scn9a-201ENSMUST00000100063 Mfap1aC0HKD8 439 aaKnown RBP12.78□□□□□ -0.36
Scn9a-201ENSMUST00000100063 Mfap1bC0HKD9 439 aaKnown RBP12.78□□□□□ -0.36
Scn9a-201ENSMUST00000100063 Shq1Q7TMX5 569 aa12.78□□□□□ -0.36
Scn9a-201ENSMUST00000100063 EspnQ9ET47 871 aa12.78□□□□□ -0.36
Scn9a-201ENSMUST00000100063 Gsdma3Q5Y4Y6 464 aa12.77□□□□□ -0.36
Scn9a-201ENSMUST00000100063 BccipQ9CWI3 316 aa12.77□□□□□ -0.36
Scn9a-201ENSMUST00000100063 Klf15Q9EPW2 415 aa12.77□□□□□ -0.36
Scn9a-201ENSMUST00000100063 Ncbp3Q8BZR9 615 aaKnown RBP12.77□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Lrrcc1Q69ZB0 1026 aa12.77□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Cetn4Q8K4K1 168 aa12.77□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Fmn1Q05860 1466 aa12.76□□□□□ -0.37
Scn9a-201ENSMUST00000100063 March6Q6ZQ89 909 aa12.76□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Soga1E1U8D0 1418 aa12.76□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Cabp1Q9JLK7 227 aa12.76□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Tsen2Q6P7W5 460 aa12.76□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Sart1Q9Z315 806 aaKnown RBP12.76□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Ccnb3Q810T2 1396 aa12.75□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Tnnt2P50752 301 aa12.74□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Cplx1P63040 134 aa12.74□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Gabpb2P81069 414 aa12.74□□□□□ -0.37
Scn9a-201ENSMUST00000100063 BcanQ61361 883 aa12.74□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Mphosph9A6H5Y1 991 aa12.73□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Cspp1B2RX88 1205 aa12.73□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Hook1Q8BIL5 728 aa12.73□□□□□ -0.37
Scn9a-201ENSMUST00000100063 ArsiQ32KI9 573 aa12.72□□□□□ -0.37
Scn9a-201ENSMUST00000100063 MycnP03966 462 aaKnown RBP12.72□□□□□ -0.37
Scn9a-201ENSMUST00000100063 PhaxQ9JJT9 385 aaKnown RBP12.72□□□□□ -0.37
Scn9a-201ENSMUST00000100063 CntlnA2AM05 1397 aa12.72□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Eif2s2Q99L45 331 aaKnown RBP12.72□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Cyb5rlB1AS42 316 aa12.72□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Dnttip2Q8R2M2 758 aaKnown RBP12.72□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Smg7Q5RJH6 1138 aaKnown RBP12.72□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Phldb1Q6PDH0 1371 aaKnown RBP12.71□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Arid4aF8VPQ2 1261 aaKnown RBP12.71□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Sugp2Q8CH09 1067 aa12.71□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Mink1Q9JM52 1308 aa12.71□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Becn1O88597 448 aa12.71□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Ncoa2Q61026 1462 aa12.71□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Dnai1Q8C0M8 701 aa12.71□□□□□ -0.37
Scn9a-201ENSMUST00000100063 UacaQ8CGB3 1411 aa12.71□□□□□ -0.37
Scn9a-201ENSMUST00000100063 Q8C5K5 320 aa12.71□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Znf710Q3U288 666 aa12.7□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Nap1l3Q794H2 544 aa12.7□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Ccdc146E9Q9F7 977 aa12.7□□□□□ -0.38
Scn9a-201ENSMUST00000100063 St18Q80TY4 1045 aa12.7□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Ttll5Q8CHB8 1328 aa12.7□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Neurod6P48986 337 aa12.7□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Filip1lQ6P6L0 1131 aa12.7□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Hmgb2P30681 210 aaKnown RBP12.7□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Rnf20Q5DTM8 973 aa12.7□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Sf3a1Q8K4Z5 791 aaKnown RBP12.69□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Sytl4Q9R0Q1 673 aa12.69□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Trim29Q8R2Q0 587 aa12.69□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Rec8Q8C5S7 591 aa12.69□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Dmrt2Q8BG36 561 aa12.69□□□□□ -0.38
Scn9a-201ENSMUST00000100063 CrbnQ8C7D2 445 aa12.68□□□□□ -0.38
Scn9a-201ENSMUST00000100063 AcrbpQ3V140 540 aa12.67□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Kiaa0754Q69ZZ9 979 aa12.67□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Ipo8Q7TMY7 1010 aa12.67□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Tcerg1Q8CGF7 1100 aaKnown RBP12.67□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Prl7d1P04769 244 aa12.67□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms