RNA–Protein interactions for RNA: ENSMUST00000098441.9

Col6a6-202, Transcript of Collagen alpha-6(VI) chain, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Col6a6, Length 8,781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-202ENSMUST00000098441 Pdcl3Q8BVF2 240 aa13.68□□□□□ -0.22
Col6a6-202ENSMUST00000098441 Stk24Q99KH8 431 aa13.68□□□□□ -0.22
Col6a6-202ENSMUST00000098441 Kif15Q6P9L6 1387 aa13.68□□□□□ -0.22
Col6a6-202ENSMUST00000098441 EzrP26040 586 aaKnown RBP13.67□□□□□ -0.22
Col6a6-202ENSMUST00000098441 Kri1Q8VDQ9 704 aaKnown RBP13.67□□□□□ -0.22
Col6a6-202ENSMUST00000098441 Cplx2P84086 134 aa13.67□□□□□ -0.22
Col6a6-202ENSMUST00000098441 Utp3Q9JI13 469 aaKnown RBP13.66□□□□□ -0.22
Col6a6-202ENSMUST00000098441 Fyco1Q8VDC1 1437 aa13.66□□□□□ -0.22
Col6a6-202ENSMUST00000098441 Kif3aP28741 701 aa13.66□□□□□ -0.22
Col6a6-202ENSMUST00000098441 NaspQ99MD9 773 aaKnown RBP13.66□□□□□ -0.22
Col6a6-202ENSMUST00000098441 Ccdc173A0JLY1 547 aa13.66□□□□□ -0.22
Col6a6-202ENSMUST00000098441 Casq1O09165 405 aa13.66□□□□□ -0.22
Col6a6-202ENSMUST00000098441 Rundc1Q0VDN7 615 aa13.66□□□□□ -0.22
Col6a6-202ENSMUST00000098441 Kif7B7ZNG0 1348 aa13.66□□□□□ -0.22
Col6a6-202ENSMUST00000098441 Gripap1Q8VD04 806 aa13.66□□□□□ -0.22
Col6a6-202ENSMUST00000098441 Odf2A3KGV1 830 aaKnown RBP13.65□□□□□ -0.22
Col6a6-202ENSMUST00000098441 Gtf2e1Q9D0D5 440 aa13.65□□□□□ -0.22
Col6a6-202ENSMUST00000098441 Ppm1eQ80TL0 749 aa13.65□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Stard8Q8K031 1019 aa13.65□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Arhgap35Q91YM2 1499 aa13.64□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Kif4P33174 1231 aa13.63□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Vps53Q8CCB4 832 aa13.63□□□□□ -0.23
Col6a6-202ENSMUST00000098441 NacadQ5SWP3 1504 aa13.63□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Cnga1P29974 684 aa13.63□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Krt82Q99M74 516 aa13.63□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Ddx11Q6AXC6 880 aa13.62□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Gprasp1Q5U4C1 1347 aa13.62□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Cluap1Q8R3P7 413 aa13.62□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Chmp4cQ9D7F7 232 aa13.61□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Chmp3Q9CQ10 224 aa13.61□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Dhx8A2A4P0 1244 aaKnown RBP13.61□□□□□ -0.23
Col6a6-202ENSMUST00000098441 HmmrQ00547 794 aaKnown RBP13.61□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Exoc6Q8R313 802 aa13.6□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Pnmal2G3X9N3 661 aa13.6□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Prm3Q62100 101 aa13.6□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Slc4a1apE9PX68 744 aa13.6□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Ksr2Q3UVC0 959 aa13.59□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Mns1Q61884 491 aa13.59□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Necab1Q8BG18 352 aa13.59□□□□□ -0.23
Col6a6-202ENSMUST00000098441 KinQ8K339 391 aa13.59□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Pkd2O35245 966 aa13.59□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Arhgap27A2AB59 869 aa13.59□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Hspa5P20029 655 aaKnown RBP13.59□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Arid4aF8VPQ2 1261 aaKnown RBP13.59□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Gps2Q921N8 327 aa13.58□□□□□ -0.23
Col6a6-202ENSMUST00000098441 Rnf20Q5DTM8 973 aa13.58□□□□□ -0.24
Col6a6-202ENSMUST00000098441 Drc7Q6V3W6 876 aa13.57□□□□□ -0.24
Col6a6-202ENSMUST00000098441 Gpatch3Q8BIY1 525 aa13.57□□□□□ -0.24
Col6a6-202ENSMUST00000098441 Mical1Q8VDP3 1048 aa13.56□□□□□ -0.24
Col6a6-202ENSMUST00000098441 Kif16bB1AVY7 1312 aa13.56□□□□□ -0.24
Col6a6-202ENSMUST00000098441 Cplx1P63040 134 aa13.55□□□□□ -0.24
Col6a6-202ENSMUST00000098441 Map4P27546 1125 aaKnown RBP13.55□□□□□ -0.24
Col6a6-202ENSMUST00000098441 Rab11fip3Q8CHD8 1047 aa13.55□□□□□ -0.24
Col6a6-202ENSMUST00000098441 Rrp9Q91WM3 475 aaKnown RBP13.55□□□□□ -0.24
Col6a6-202ENSMUST00000098441 Baz1bQ9Z277 1479 aa13.55□□□□□ -0.24
Col6a6-202ENSMUST00000098441 Ifit1bl1D3Z6F0 470 aa13.55□□□□□ -0.24
Col6a6-202ENSMUST00000098441 PhaxQ9JJT9 385 aaKnown RBP13.55□□□□□ -0.24
Col6a6-202ENSMUST00000098441 Smc4Q8CG47 1286 aa13.55□□□□□ -0.24
Col6a6-202ENSMUST00000098441 Dixdc1Q80Y83 711 aa13.54□□□□□ -0.24
Col6a6-202ENSMUST00000098441 Rec8Q8C5S7 591 aa13.54□□□□□ -0.24
Col6a6-202ENSMUST00000098441 Ccdc43Q9CR29 222 aaKnown RBP13.54□□□□□ -0.24
Col6a6-202ENSMUST00000098441 Znf771Q8BJ90 317 aa13.54□□□□□ -0.24
Col6a6-202ENSMUST00000098441 Tomm22Q9CPQ3 142 aa13.54□□□□□ -0.24
Col6a6-202ENSMUST00000098441 Znf330Q922H9 316 aa13.53□□□□□ -0.24
Col6a6-202ENSMUST00000098441 Wdr78E9PYY5 807 aa13.53□□□□□ -0.24
Col6a6-202ENSMUST00000098441 Smg6P61406 1418 aaKnown RBP13.53□□□□□ -0.24
Col6a6-202ENSMUST00000098441 Def6Q8C2K1 630 aa13.52□□□□□ -0.24
Col6a6-202ENSMUST00000098441 Dcaf11Q91VU6 549 aa13.52□□□□□ -0.24
Col6a6-202ENSMUST00000098441 Kif27Q7M6Z4 1394 aa13.52□□□□□ -0.24
Col6a6-202ENSMUST00000098441 Ubxn4Q8VCH8 506 aa13.52□□□□□ -0.24
Col6a6-202ENSMUST00000098441 ChgaP26339 463 aaKnown RBP13.52□□□□□ -0.24
Col6a6-202ENSMUST00000098441 Rsph4aQ8BYM7 716 aa13.52□□□□□ -0.25
Col6a6-202ENSMUST00000098441 Bicd2Q921C5 820 aa13.52□□□□□ -0.25
Col6a6-202ENSMUST00000098441 MyclP10166 368 aa13.52□□□□□ -0.25
Col6a6-202ENSMUST00000098441 Rabep1O35551 862 aa13.51□□□□□ -0.25
Col6a6-202ENSMUST00000098441 Fam193aQ8CGI1 1231 aaKnown RBP13.51□□□□□ -0.25
Col6a6-202ENSMUST00000098441 Plekhh2Q8C115 1491 aa13.51□□□□□ -0.25
Col6a6-202ENSMUST00000098441 Cchcr1Q8K2I2 770 aa13.51□□□□□ -0.25
Col6a6-202ENSMUST00000098441 Cdkn1cP49919 348 aa13.5□□□□□ -0.25
Col6a6-202ENSMUST00000098441 Srcin1Q9QWI6 1250 aa13.5□□□□□ -0.25
Col6a6-202ENSMUST00000098441 Mrvi1Q9WUX5 899 aaKnown RBP13.5□□□□□ -0.25
Col6a6-202ENSMUST00000098441 Plin1Q8CGN5 517 aa13.5□□□□□ -0.25
Col6a6-202ENSMUST00000098441 Rock1P70335 1354 aa13.5□□□□□ -0.25
Col6a6-202ENSMUST00000098441 Birc3O08863 600 aa13.49□□□□□ -0.25
Col6a6-202ENSMUST00000098441 Tnnt1O88346 262 aa13.49□□□□□ -0.25
Col6a6-202ENSMUST00000098441 Cep112Q5PR68 954 aa13.49□□□□□ -0.25
Col6a6-202ENSMUST00000098441 Ciz1Q8VEH2 845 aa13.48□□□□□ -0.25
Col6a6-202ENSMUST00000098441 CrbnQ8C7D2 445 aa13.48□□□□□ -0.25
Col6a6-202ENSMUST00000098441 Lrrcc1Q69ZB0 1026 aa13.48□□□□□ -0.25
Col6a6-202ENSMUST00000098441 Trim55G3X8Y1 545 aa13.47□□□□□ -0.25
Col6a6-202ENSMUST00000098441 AppP12023 770 aa13.47□□□□□ -0.25
Col6a6-202ENSMUST00000098441 Atl3Q91YH5 541 aa13.47□□□□□ -0.25
Col6a6-202ENSMUST00000098441 Fam43aQ8BUP8 424 aa13.47□□□□□ -0.25
Col6a6-202ENSMUST00000098441 Ipo4Q8VI75 1082 aa13.47□□□□□ -0.25
Col6a6-202ENSMUST00000098441 UvssaQ9D479 717 aa13.47□□□□□ -0.25
Col6a6-202ENSMUST00000098441 Slc4a10Q5DTL9 1118 aa13.47□□□□□ -0.25
Col6a6-202ENSMUST00000098441 Erlin2Q8BFZ9 340 aa13.47□□□□□ -0.25
Col6a6-202ENSMUST00000098441 Ccdc146E9Q9F7 977 aa13.46□□□□□ -0.25
Col6a6-202ENSMUST00000098441 Trim29Q8R2Q0 587 aa13.46□□□□□ -0.25
Col6a6-202ENSMUST00000098441 PdcQ9QW08 244 aa13.46□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms