RNA–Protein interactions for RNA: ENSMUST00000097653.10

Col6a3-202, Transcript of Collagen, type VI, alpha 3, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a3, Length 9,001 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-202ENSMUST00000097653 Rsph3aQ3UFY4 516 aa13.07□□□□□ -0.32
Col6a3-202ENSMUST00000097653 Atp6v1dP57746 247 aa13.07□□□□□ -0.32
Col6a3-202ENSMUST00000097653 AknaQ80VW7 1404 aa13.07□□□□□ -0.32
Col6a3-202ENSMUST00000097653 CrbnQ8C7D2 445 aa13.06□□□□□ -0.32
Col6a3-202ENSMUST00000097653 Chaf1aQ9QWF0 911 aa13.06□□□□□ -0.32
Col6a3-202ENSMUST00000097653 Ush1cQ9ES64 910 aa13.06□□□□□ -0.32
Col6a3-202ENSMUST00000097653 Cluap1Q8R3P7 413 aa13.06□□□□□ -0.32
Col6a3-202ENSMUST00000097653 Srcin1Q9QWI6 1250 aa13.06□□□□□ -0.32
Col6a3-202ENSMUST00000097653 GorabQ8BRM2 368 aa13.05□□□□□ -0.32
Col6a3-202ENSMUST00000097653 MecomP14404 1042 aa13.05□□□□□ -0.32
Col6a3-202ENSMUST00000097653 Ksr2Q3UVC0 959 aa13.05□□□□□ -0.32
Col6a3-202ENSMUST00000097653 Plin1Q8CGN5 517 aa13.05□□□□□ -0.32
Col6a3-202ENSMUST00000097653 Vps53Q8CCB4 832 aa13.05□□□□□ -0.32
Col6a3-202ENSMUST00000097653 Stard8Q8K031 1019 aa13.05□□□□□ -0.32
Col6a3-202ENSMUST00000097653 Stk26Q99JT2 416 aa13.05□□□□□ -0.32
Col6a3-202ENSMUST00000097653 CgnP59242 1191 aa13.05□□□□□ -0.32
Col6a3-202ENSMUST00000097653 Q3TQI7 289 aaKnown RBP13.04□□□□□ -0.32
Col6a3-202ENSMUST00000097653 Fbxo2Q80UW2 297 aa13.03□□□□□ -0.32
Col6a3-202ENSMUST00000097653 Ppp1r18Q8BQ30 594 aa13.03□□□□□ -0.32
Col6a3-202ENSMUST00000097653 Znf330Q922H9 316 aa13.03□□□□□ -0.32
Col6a3-202ENSMUST00000097653 Glipr1l2Q9CQ35 332 aa13.02□□□□□ -0.32
Col6a3-202ENSMUST00000097653 Tpm4Q6IRU2 248 aa13.02□□□□□ -0.33
Col6a3-202ENSMUST00000097653 Tpm1P58771 284 aa13.02□□□□□ -0.33
Col6a3-202ENSMUST00000097653 Mre11Q61216 706 aa13.02□□□□□ -0.33
Col6a3-202ENSMUST00000097653 Gtf3c3Q3TMP1 882 aa13.01□□□□□ -0.33
Col6a3-202ENSMUST00000097653 Rock1P70335 1354 aa13.01□□□□□ -0.33
Col6a3-202ENSMUST00000097653 ChgaP26339 463 aaKnown RBP13.01□□□□□ -0.33
Col6a3-202ENSMUST00000097653 Taf3Q5HZG4 932 aa13.01□□□□□ -0.33
Col6a3-202ENSMUST00000097653 Ankrd36D3Z4K0 1415 aa13.01□□□□□ -0.33
Col6a3-202ENSMUST00000097653 Hap1O35668 628 aa13□□□□□ -0.33
Col6a3-202ENSMUST00000097653 Birc3O08863 600 aa13□□□□□ -0.33
Col6a3-202ENSMUST00000097653 Cwc15Q9JHS9 229 aaKnown RBP13□□□□□ -0.33
Col6a3-202ENSMUST00000097653 Nolc1E9Q5C9 702 aaKnown RBP12.99□□□□□ -0.33
Col6a3-202ENSMUST00000097653 Dctn1O08788 1281 aa12.99□□□□□ -0.33
Col6a3-202ENSMUST00000097653 Cgnl1Q6AW69 1298 aa12.99□□□□□ -0.33
Col6a3-202ENSMUST00000097653 Carmil1Q6EDY6 1374 aa12.99□□□□□ -0.33
Col6a3-202ENSMUST00000097653 SlkO54988 1233 aa12.99□□□□□ -0.33
Col6a3-202ENSMUST00000097653 Ccnb3Q810T2 1396 aa12.98□□□□□ -0.33
Col6a3-202ENSMUST00000097653 Lemd3Q9WU40 921 aa12.98□□□□□ -0.33
Col6a3-202ENSMUST00000097653 Ccdc47Q9D024 483 aaKnown RBP12.97□□□□□ -0.33
Col6a3-202ENSMUST00000097653 St18Q80TY4 1045 aa12.97□□□□□ -0.33
Col6a3-202ENSMUST00000097653 Tpm2P58774 284 aa12.97□□□□□ -0.33
Col6a3-202ENSMUST00000097653 Taok2Q6ZQ29 1240 aa12.97□□□□□ -0.33
Col6a3-202ENSMUST00000097653 Tpd52l1O54818 204 aa12.97□□□□□ -0.33
Col6a3-202ENSMUST00000097653 Filip1lQ6P6L0 1131 aa12.96□□□□□ -0.33
Col6a3-202ENSMUST00000097653 Brpf1B2RRD7 1212 aa12.96□□□□□ -0.33
Col6a3-202ENSMUST00000097653 Chmp3Q9CQ10 224 aa12.96□□□□□ -0.33
Col6a3-202ENSMUST00000097653 Ppm1fQ8CGA0 452 aa12.96□□□□□ -0.33
Col6a3-202ENSMUST00000097653 Anp32eP97822 260 aaKnown RBP12.95□□□□□ -0.34
Col6a3-202ENSMUST00000097653 Gpatch11Q3UFS4 262 aa12.95□□□□□ -0.34
Col6a3-202ENSMUST00000097653 Tomm22Q9CPQ3 142 aa12.95□□□□□ -0.34
Col6a3-202ENSMUST00000097653 CenpjQ569L8 1344 aa12.94□□□□□ -0.34
Col6a3-202ENSMUST00000097653 Cux2P70298 1426 aa12.94□□□□□ -0.34
Col6a3-202ENSMUST00000097653 Kri1Q8VDQ9 704 aaKnown RBP12.94□□□□□ -0.34
Col6a3-202ENSMUST00000097653 Psme1P97371 249 aa12.94□□□□□ -0.34
Col6a3-202ENSMUST00000097653 Ipo7Q9EPL8 1038 aaKnown RBP12.94□□□□□ -0.34
Col6a3-202ENSMUST00000097653 Ccer1Q9CQL2 403 aa12.93□□□□□ -0.34
Col6a3-202ENSMUST00000097653 Tnnt1O88346 262 aa12.93□□□□□ -0.34
Col6a3-202ENSMUST00000097653 CrebrfQ8CDG5 640 aaKnown RBP12.93□□□□□ -0.34
Col6a3-202ENSMUST00000097653 Cecr2E9Q2Z1 1453 aa12.93□□□□□ -0.34
Col6a3-202ENSMUST00000097653 Dapk1Q80YE7 1442 aa12.93□□□□□ -0.34
Col6a3-202ENSMUST00000097653 Pank3Q8R2W9 370 aa12.93□□□□□ -0.34
Col6a3-202ENSMUST00000097653 Rufy1Q8BIJ7 712 aa12.92□□□□□ -0.34
Col6a3-202ENSMUST00000097653 Pknox2Q8BG99 474 aa12.92□□□□□ -0.34
Col6a3-202ENSMUST00000097653 A0A1L1SQF0 893 aa12.91□□□□□ -0.34
Col6a3-202ENSMUST00000097653 Iqgap2Q3UQ44 1575 aa12.91□□□□□ -0.34
Col6a3-202ENSMUST00000097653 Tsen2Q6P7W5 460 aa12.91□□□□□ -0.34
Col6a3-202ENSMUST00000097653 Sf3a1Q8K4Z5 791 aaKnown RBP12.9□□□□□ -0.34
Col6a3-202ENSMUST00000097653 AampJ3QN89 436 aa12.9□□□□□ -0.34
Col6a3-202ENSMUST00000097653 Kif3cO35066 796 aa12.9□□□□□ -0.34
Col6a3-202ENSMUST00000097653 Odf2A3KGV1 830 aaKnown RBP12.89□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Casq1O09165 405 aa12.89□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Ecm2Q5FW85 670 aa12.89□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Txndc2Q6P902 515 aa12.89□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Ncoa2Q61026 1462 aa12.88□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Ralbp1Q62172 648 aa12.88□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Fan1Q69ZT1 1020 aa12.88□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Mical1Q8VDP3 1048 aa12.88□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Kif3bQ61771 747 aa12.88□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Top2aQ01320 1528 aaKnown RBP12.88□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Znhit6Q3UFB2 460 aaKnown RBP12.87□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Ddx11Q6AXC6 880 aa12.87□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Rsph4aQ8BYM7 716 aa12.87□□□□□ -0.35
Col6a3-202ENSMUST00000097653 MlecQ6ZQI3 291 aaKnown RBP12.87□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Kif16bB1AVY7 1312 aa12.87□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Gm21969J3QJZ1 289 aa12.87□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Sox12Q04890 314 aa12.87□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Pibf1E9Q6K3 756 aa12.87□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Senp3Q9EP97 568 aaKnown RBP12.87□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Ccdc146E9Q9F7 977 aa12.87□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Ppm1eQ80TL0 749 aa12.86□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Paf1Q8K2T8 535 aa12.86□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Ccdc60Q8C4J0 545 aa12.86□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Arid3cA6PWV5 409 aa12.86□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Krt82Q99M74 516 aa12.85□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Nap1l3Q794H2 544 aa12.85□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Ciz1Q8VEH2 845 aa12.85□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Inpp5dQ9ES52 1191 aa12.85□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Vps8Q0P5W1 1427 aa12.85□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Gps2Q921N8 327 aa12.84□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 81 ms